Quantifying Soil Complexity Using Fisher Shannon Method on 3D X-ray Computed Tomography Scans.

The conversion of native forest into agricultural land, which is common in many parts of the world, poses important questions regarding soil degradation, demanding further efforts to better understand the effect of land use change on soil functions. With the advent of 3D computed tomography techniques and computing power, new methods are becoming available to address this question. In this direction, in the current work we implement a modification of the Fisher-Shannon method, borrowed from information theory, to quantify the complexity of twelve 3D CT soil samples from a sugarcane plantation and twelve samples from a nearby native Atlantic forest in northeastern Brazil. The distinction found between the samples from the sugar plantation and the Atlantic forest site is quite pronounced. The results at the level of 91.7% accuracy were obtained considering the complexity in the Fisher-Shannon plane. Atlantic forest samples are found to be generally more complex than those from the sugar plantation.

Dataset for effects of the transition from dry forest to pasture on diversity and structure of bacterial communities in Northeastern Brazil.

The data included in this article supplement the research article titled "Forest-to-pasture conversion modifies the soil bacterial community in Brazilian dry forest Caatinga (manuscript ID: STOTEN-D-21-19067R1)". This data article included the analysis of 18 chemical variables in 36 composite samples (included 4 replicates) of soils from the Microregion of Garanhuns (Northeast Brazil) and also partial 16S rRNA gene sequences from genomic DNA extracted from 27 of these samples (included 3 best quality replicates) for paired-end sequencing (up to 2 × 300 bp) in Illumina MiSeq platform (NCBI - BioProject accession: PRJNA753707). Soils were collected in August 2018 in a tropical subhumid region from the Brazilian Caatinga, along with 27 composite samples from the aboveground part of pastures to determine nutritional quality based on leaf N content. The analysis of variance (ANOVA) and post-hoc tests of environmental data and the main alpha-diversity indices based on linear mixed models (LMM) were represented in the tables. In this case, the collection region (C1 - Brejão, C2 - Garanhuns, and C3 - São João) was the random-effect variable and adjacent habitats formed by a forest (FO) and two pastures (PA and PB succeeded by this forest) composed the fixed-effect variable (land cover), both nested within C. In addition, a table with similarity percentages breakdown (SIMPER) was also shown, a procedure to assess the average percent contribution of individual phyla and bacterial classes. The figures showed the details of the study location, sampling procedure, vegetation status through the Normalized Difference Vegetation Index (NDVI), in addition to the general abundance and composition of the main bacterial phyla.

Forest-to-pasture conversion modifies the soil bacterial community in Brazilian dry forest Caatinga.

Soils comprise a huge fraction of the world's biodiversity, contributing to several crucial ecosystem functions. However, how the forest-to-pasture conversion impact soil bacterial diversity remains poorly understood, mainly in the Caatinga biome, the largest tropical dry forest of the world. Here, we hypothesized that forest-to-pasture conversion would shape the microbial community. Thus, the soil bacterial community was assessed using the 16S rRNA gene sequencing into the Illumina MiSeq platform. Then, we analyzed ecological patterns and correlated the bacterial community with environmental parameters in forest, and two distinct pastures areas, one less productive and another more productive. The variation in soil properties in pastures and forest influenced the structure and diversity of the bacterial community. Thus, the more productive pasture positively influenced the proportion of specialists and the co-occurrence network compared to the less productive pasture. Also, Proteobacteria, Acidobacteria, and Verrucomicrobia were abundant under forest, while Actinobacteria, Firmicutes, and Chloroflexi were abundant under pastures. Also, the more productive pasture presented a higher bacterial diversity, which is important since that a more stable and connected bacterial community could benefit the agricultural environment and enhance plant performance, as can be observed by the highest network complexity in this pasture. Together, our findings elucidate a significant shift in soil bacterial communities as a consequence of forest-to-pasture conversion and bring important information for the development of preservation strategies.

Production of 1,3-propanediol by Lactobacillus diolivorans from agro-industrial residues and cactus cladode acid hydrolyzate.

This study evaluated the bioproduction of 1,3-propanediol by Lactobacillus diolivorans in the medium based on agro-industrial residues and vegetal biomass substituting the MRS medium components. It was performed on a set of acid treatments and batch fermentations assays with crude glycerol (TCG) from biodiesel production, corn steep liquor (CSL), and cactus cladode hydrolyzate (CCH). Firstly, it was carried out on batch fermentation with different pure glycerol concentrations in MRS medium which was carried out, and the best condition achieved 4.66 g/L and 0.61 g/g of 1,3-PDO production and yield, respectively. Then, the TCG was evaluated, and a discrete increase of 1,3-PDO was observed. The replacement of the MRS medium nutrients by CLS was assessed, at different concentrations, for bacteria growth, and 5% of CLS reproduced the same biomass formation compared to the bacteria growth in MRS medium. It was also added cactus cladode hydrolyzate as the only sugar source, which showed a 1,3-PDO production close to the medium with pure glucose. Finally, a B-complex vitamin was added to the batch fermentation medium composed of TCG, CLS, and CCH, replacing all the costly MRS components. In this medium, the production of 1,3-propanediol was 6.57 g/L with a yield of 0.75 g/g. It means an increment of 29% and 19%, respectively, compared to MRS medium. Therefore, the combination of treated crude glycerol, corn steep liquor, and cactus cladode hydrolyzate has excellent potential for 1,3-PDO production by L. diolivorans.

INVESTIGATION OF NATURAL RADIOACTIVITY AS A POSSIBLE DRIVER OF CANCER INCIDENCE IN PARAÍBA, NORTHEASTERN BRAZIL.

An increase of health problems has been reported in the city of Triunfo, Paraíba, NE Brazil. This pattern has been attributed to environmental radiation since there are uranium deposits in the neighboring municipalities. The present study aimed to carry a radiometric survey in Triunfo to determine effective dose from external outdoor radiation exposure. The results were obtained through 'in situ' measurements using a gamma spectrometry system. The results ranged from 0.06 to 0.38 mSv/y, mean of 0.20 mSv/y. Due to the low value of the effective dose rate, we concluded that the area is characterized by low background radiation. Therefore, natural radioactivity is probably not directly influencing the increase in cancer incidence in the region. However, there is a need for complementary studies in this area to evaluate the dose from potential exposure to ingested and inhaled natural radionuclides from natural radioactivity in soil, rocks, vegetation and water.

THERMOLUMINESCENT DOSIMETRY IN THE EVALUATION OF NATURAL RADIOACTIVITY INDOOR OF HOMES NEAR THE URANIUM DEPOSIT OF PARAÍBA, BRAZIL.

High levels of primordial radionuclides have been reported in soils and rocks of São José de Espinharas, in the state of Paraiba, Brazil. These radionuclides are derived from high concentrations of natural uranium and thorium from a mine in the region. Thus, there is a need for a dosimetric evaluation in the area near the mine and the surrounding cities. In this study, the annual effective dose was analyzed in 178 points of five cities. The measurements were performed using thermoluminescent dosimetry with LiF:Mg, Ti (TLD-100). The annual effective dose from environmental exposure varied from 0.71 to 2.07 mSv, with an arithmetic mean of 0.99 mSv. This average is more than twice the estimated value for indoor environments adopted by the UNSCEAR, which is 0.41 mSv. These results will allow establishing reference values for background radiation of the region and criteria to infer a stochastic risk for the local population.

Enzymatic hydrolysis of cactus pear varieties with high solids loading for bioethanol production.

The optimization of enzymatic hydrolysis, with high solids loading, of two species of cactus pear for bioethanol production was tested evaluating the influence of surfactant Tween 80 and pretreatment with H2O and H2SO4 (1% v/v) (50 °C, 150 rpm, 3 h). XRD and FTIR analyzes were performed. Afterwards, the influence of the factors cellulase (FPU g-1), pectinase (U g-1) and solids load (% w/v), on the hydrolysis of varieties (50 °C, 150 rpm, 48 h), and the fermentation of the optimal point (33 °C, 8 h) were evaluated. The pretreatments and the Tween 80 did not increase the hydrolysis yields and Rotacional Central Compound Design indicated that the pectinase factor was not significant. The best cellulase and solids load conditions were 10 FPU g-1 of biomass and 30% w/v for both species. The fermentation efficiency of hydrolysates for Nopalea cochenillifera and Opuntia ficus-indica were 76.3% and 82.8%, respectively, showing their potential for bioethanol production.

EDXRF as an alternative method for multielement analysis of tropical soils and sediments.

The quality assessment of tropical soils and sediments is still under discussion, with efforts being made on the part of governmental agencies to establish reference values. Energy dispersive X-ray fluorescence (EDXRF) is a potential analytical technique for quantifying diverse chemical elements in geological material without chemical treatment, primarily when it is performed at an appropriate metrological level. In this work, analytical curves were obtained by means of the analysis of geological reference materials (RMs), which allowed for the researchers to draw a comparison among the sources of analytical uncertainty. After having determined the quality assurance of the analytical procedure, the EDXRF method was applied to determine chemical elements in soils from the state of Pernambuco, Brazil. The regression coefficients of the analytical curves used to determine Al, Ca, Fe, K, Mg, Mn, Ni, Pb, Si, Sr, Ti, and Zn were higher than 0.99. The quality of the analytical procedure was demonstrated at a 95% confidence level, in which the estimated analytical uncertainties agreed with those from the RM's certificates of analysis. The analysis of diverse geological samples from Pernambuco indicated higher concentrations of Ni and Zn in sugarcane, with maximum values of 41 mg kg- 1 and 118 mg kg- 1, respectively, and agricultural areas (41 mg kg- 1 and 127 mg kg- 1, respectively). The trace element Sr was mainly enriched in urban soils with values of 400 mg kg- 1. According to the results, the EDXRF method was successfully implemented, providing some chemical tracers for the quality assessment of tropical soils and sediments.

Recycling the liquid fraction of alkaline hydrogen peroxide in the pretreatment of corn stover.

The aim of this study was to evaluate the influence of recycling the liquid fraction of pretreatment with alkaline hydrogen peroxide (AHP) on the hydrolysis of corn stover. Corn stover was pretreated in the traditional condition with 7.5% v/v H2O2. After pretreatment, the solids were separated from the liquid fraction and five successive reuse cycles of the liquid fraction were tested. The solid fraction from pretreatment in each recycle was submitted to enzymatic hydrolysis. The number of recycles had a linear negative effect (R2=0.98) on biomass delignification efficiency and also affected negatively the enzymatic conversion efficiency. Despite the decrease in efficiency after each recycling step, reuse of the liquid fraction leads to reduction in water, H2O2 and NaOH consumption of up to 57.6%, 59.6% and 57.6%, respectively. These findings point to an efficient recycling technology, which may reduce costs and save water.

Land cover changes and greenhouse gas emissions in two different soil covers in the Brazilian Caatinga.

The Caatinga biome covers an area of 844,453km(2) and has enormous endemic biodiversity, with unique characteristics that make it an exclusive Brazilian biome. It falls within the earth's tropical zone and is one of the several important ecoregions of Brazil. This biome undergoes natural lengthy periods of drought that cause losses in crop and livestock productivity, having a severe impact on the population. Due to the vulnerability of this ecosystem to climate change, livestock has emerged as the main livelihood of the rural population, being the precursor of the replacement of native vegetation by grazing areas. This study aimed to measure GHG emissions from two different soil covers: native forest (Caatinga) and pasture in the municipality of São João, Pernambuco State, in the years 2013 and 2014. GHG measurements were taken by using static chamber techniques in both soil covers. According to a previous search, so far, this is the first study measuring GHG emissions using the static chamber in the Caatinga biome. N2O emissions ranged from -1.0 to 4.2mgm(-2)d(-1) and -1.22 to 3.4mgm(-2)d(-1) in the pasture and Caatinga, respectively, and they did not significantly differ from each other. Emissions were significantly higher during dry seasons. Carbon dioxide ranged from -1.1 to 14.1 and 1.2 to 15.8gm(-2)d(-1) in the pasture and Caatinga, respectively. CO2 emissions were higher in the Caatinga in 2013, and they were significantly influenced by soil temperature, showing an inverse relation. Methane emission ranged from 6.6 to 6.8 and -6.0 to 4.8mgm(-2)d(-1) in the pasture and Caatinga, respectively, and was significantly higher only in the Caatinga in the rainy season of 2014. Soil gas fluxes seemed to be influenced by climatic and edaphic conditions as well as by soil cover in the Caatinga biome.

Characterization of heavy metals in a uranium ore region of the state of Pernambuco, Brazil.

The concentrations of As, Zn, Co, Cr, and Ba were determined in soil samples from an anomalous uranium ore region in the countryside of the state of Pernambuco, Brazil. The main land use system in this region is dairy farming, and there is a need to evaluate the potential risk of milk contamination. Twenty-three soil samples were activated with neutrons and analyzed using a high-resolution gamma-ray spectrometer system. The results, recorded in mg kg(-1), varied from 0.4 to 6.7 for As, from 17.0 to 110.0 for Zn, from 2.8 to 38.4 for Co, from 12.1 to 65.5 for Cr, and from 443.0 to 1,497.0 for Ba. All of the Ba concentrations were higher than the intervention value adopted by the Brazilian National Environmental Board. This finding justifies research in other environmental areas to predict the toxicological risks to the local population.

(15)N natural abundance of non-fixing woody species in the Brazilian dry forest (caatinga).

Foliar delta(15)N values are useful to calculate N(2) fixation and N losses from ecosystems. However, a definite pattern among vegetation types is not recognised and few data are available for semi-arid areas. We sampled four sites in the Brazilian caatinga, along a water availability gradient. Sites with lower annual rainfall (700 mm) but more uniform distribution (six months) had delta(15)N values of 9.4 and 10.1 per thousand, among the highest already reported, and significantly greater than those (6.5 and 6.3 per thousand) of sites with higher rainfall (800 mm) but less uniform distribution (three months). There were no significant differences at each site among species or between non-fixing legume and non-legume species, in spite of the higher N content of the first group. Therefore, they constitute ideal reference plants in estimations of legume N(2) fixation. The higher values could result from higher losses of (15)N depleted gases or lower losses of enriched (15)N material.