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1.
Nat Commun ; 15(1): 3213, 2024 Apr 13.
Article in English | MEDLINE | ID: mdl-38615060

ABSTRACT

Oxidative stress-induced lipid accumulation is mediated by lipid droplets (LDs) homeostasis, which sequester vulnerable unsaturated triglycerides into LDs to prevent further peroxidation. Here we identify the upregulation of lipopolysaccharide-binding protein (LBP) and its trafficking through LDs as a mechanism for modulating LD homeostasis in response to oxidative stress. Our results suggest that LBP induces lipid accumulation by controlling lipid-redox homeostasis through its lipid-capture activity, sorting unsaturated triglycerides into LDs. N-acetyl-L-cysteine treatment reduces LBP-mediated triglycerides accumulation by phospholipid/triglycerides competition and Peroxiredoxin 4, a redox state sensor of LBP that regulates the shuttle of LBP from LDs. Furthermore, chronic stress upregulates LBP expression, leading to insulin resistance and obesity. Our findings contribute to the understanding of the role of LBP in regulating LD homeostasis and against cellular peroxidative injury. These insights could inform the development of redox-based therapies for alleviating oxidative stress-induced metabolic dysfunction.


Subject(s)
Acute-Phase Proteins , Lipid Droplets , Membrane Glycoproteins , Acute-Phase Proteins/metabolism , Carrier Proteins/metabolism , Homeostasis , Lipid Droplets/metabolism , Lipopolysaccharides/metabolism , Membrane Glycoproteins/metabolism , Oxidative Stress/genetics , Oxidative Stress/physiology , Triglycerides
2.
Zool Res ; 45(1): 79-94, 2024 Jan 18.
Article in English | MEDLINE | ID: mdl-38114435

ABSTRACT

Non-alcoholic fatty liver disease (NAFLD) is associated with mutations in lipopolysaccharide-binding protein ( LBP), but the underlying epigenetic mechanisms remain understudied. Herein, LBP -/- rats with NAFLD were established and used to conduct integrative targeting-active enhancer histone H3 lysine 27 acetylation (H3K27ac) chromatin immunoprecipitation coupled with high-throughput and transcriptomic sequencing analysis to explore the potential epigenetic pathomechanisms of active enhancers of NAFLD exacerbation upon LBP deficiency. Notably, LBP -/- reduced the inflammatory response but markedly aggravated high-fat diet (HFD)-induced NAFLD in rats, with pronounced alterations in the histone acetylome and regulatory transcriptome. In total, 1 128 differential enhancer-target genes significantly enriched in cholesterol and fatty acid metabolism were identified between wild-type (WT) and LBP -/- NAFLD rats. Based on integrative analysis, CCAAT/enhancer-binding protein ß (C/EBPß) was identified as a pivotal transcription factor (TF) and contributor to dysregulated histone acetylome H3K27ac, and the lipid metabolism gene SCD was identified as a downstream effector exacerbating NAFLD. This study not only broadens our understanding of the essential role of LBP in the pathogenesis of NAFLD from an epigenetics perspective but also identifies key TF C/EBPß and functional gene SCD as potential regulators and therapeutic targets.


Subject(s)
Non-alcoholic Fatty Liver Disease , Animals , Rats , Acetylation , Histones/metabolism , Lipids , Non-alcoholic Fatty Liver Disease/etiology , Non-alcoholic Fatty Liver Disease/veterinary , Stearoyl-CoA Desaturase/metabolism
3.
Sensors (Basel) ; 23(8)2023 Apr 07.
Article in English | MEDLINE | ID: mdl-37112156

ABSTRACT

In real manufacturing environments, the number of automatic guided vehicles (AGV) is limited. Therefore, the scheduling problem that considers a limited number of AGVs is much nearer to real production and very important. In this paper, we studied the flexible job shop scheduling problem with a limited number of AGVs (FJSP-AGV) and propose an improved genetic algorithm (IGA) to minimize makespan. Compared with the classical genetic algorithm, a population diversity check method was specifically designed in IGA. To evaluate the effectiveness and efficiency of IGA, it was compared with the state-of-the-art algorithms for solving five sets of benchmark instances. Experimental results show that the proposed IGA outperforms the state-of-the-art algorithms. More importantly, the current best solutions of 34 benchmark instances of four data sets were updated.

4.
Math Biosci Eng ; 20(2): 2501-2529, 2023 Jan.
Article in English | MEDLINE | ID: mdl-36899544

ABSTRACT

Effective path planning (PP) is the basis of autonomous navigation for mobile robots. Since the PP is an NP-hard problem, intelligent optimization algorithms have become a popular option to solve this problem. As a classic evolutionary algorithm, the artificial bee colony (ABC) algorithm has been applied to solve numerous realistic optimization problems. In this study, we propose an improved artificial bee colony algorithm (IMO-ABC) to deal with the multi-objective PP problem for a mobile robot. Path length and path safety were optimized as two objectives. Considering the complexity of the multi-objective PP problem, a well-environment model and a path encoding method are designed to make solutions feasible. In addition, a hybrid initialization strategy is applied to generate efficient feasible solutions. Subsequently, path-shortening and path-crossing operators are developed and embedded in the IMO-ABC algorithm. Meanwhile, a variable neighborhood local search strategy and a global search strategy, which could enhance exploitation and exploration, respectively, are proposed. Finally, representative maps including a real environment map are employed for simulation tests. The effectiveness of the proposed strategies is verified through numerous comparisons and statistical analyses. Simulation results show that the proposed IMO-ABC yields better solutions with respect to hypervolume and set coverage metrics for the later decision-maker.

5.
Analyst ; 147(4): 671-676, 2022 Feb 14.
Article in English | MEDLINE | ID: mdl-35060584

ABSTRACT

The quantification of phenylalanine in clinical samples is essential for the diagnosis and treatment of neonatal phenylketonuria. In this report, an enzyme cascade strategy was proposed and a high-efficiency fluorescence assay was established for rapid and convenient phenylalanine quantification. The assay involves phenylalanine dehydrogenase for the quantitative metabolization of phenylalanine and the formation of NADH, as well as nitroreductase combining a nitroaromatic substrate for the fluorescent quantification of NADH and subsequently phenylalanine. The phenylalanine levels in clinical serum determined by this fluorescence assay are consistent with those from HPLC. This straightforward approach provides a versatile strategy for the development of cost-effective and convenient assays for mass screening and metabolite monitoring.


Subject(s)
Phenylalanine , Phenylketonurias , Chromatography, High Pressure Liquid , Enzyme Assays , Hematologic Tests , Humans , Infant, Newborn
6.
Front Immunol ; 12: 681810, 2021.
Article in English | MEDLINE | ID: mdl-34295331

ABSTRACT

Inflammation, which is induced by the immune response, is recognized as the driving factor in many diseases, including infections and inflammatory diseases, metabolic disorders and cancers. Genetic variations in pivotal genes associated with the immune response, particularly single nucleotide polymorphisms (SNPs), may account for predisposition and clinical outcome of diseases. Lipopolysaccharide (LPS)-binding protein (LBP) functions as an enhancer of the host response to LPS, the main component of the outer membrane of gram-native bacteria. Given the crucial role of LBP in inflammation, we will review the impact of SNPs in the LBP gene on infections and inflammatory diseases, metabolic disorders and cancers.


Subject(s)
Acute-Phase Proteins/genetics , Carrier Proteins/genetics , Genetic Association Studies , Genetic Predisposition to Disease , Membrane Glycoproteins/genetics , Polymorphism, Single Nucleotide , Acute-Phase Proteins/metabolism , Alleles , Animals , Carrier Proteins/metabolism , Communicable Diseases/etiology , Communicable Diseases/metabolism , Genotype , Humans , Inflammation/genetics , Inflammation/metabolism , Inflammation/pathology , Membrane Glycoproteins/metabolism , Metabolic Diseases/diagnosis , Metabolic Diseases/genetics , Metabolic Diseases/metabolism , Neoplasms/genetics , Neoplasms/metabolism , Neoplasms/pathology
7.
Shock ; 56(6): 1066-1079, 2021 12 01.
Article in English | MEDLINE | ID: mdl-33988537

ABSTRACT

OBJECTIVES: To explore the role of LPS binding protein (LBP) in metabolism and optimize sepsis treatment. DESIGN: A sepsis model was established by injecting LPS into LBP-/- rats and WT rats and observing changes in the liver over time (0, 1, 6, and 24 h). SETTING: Detecting liver inflammation and injury. Optimizing the treatment of sepsis. SUBJECTS: WT rats and LBP-/- rats. INTERVENTIONS: We established a sepsis model by injecting LPS intravenously. MEASUREMENTS AND MAIN RESULTS: First, we induced sepsis in WT and LBP-/- rats with LPS. The rats were sacrificed, and serum and liver samples were collected at 1, 6, and 24 h after LPS injection. We found that the deletion of LBP reduced LPS-induced liver inflammation and injury at 1 and 6 h. Ballooning degeneration was clearly present in LBP-/- rat livers at 24 h after LPS injection. We found that mitochondrial damage and reactive oxygen species (ROS) levels were higher in LBP-/- rat livers than in WT rat livers at 24 h after LPS injection. According to the transcriptomic results, the peroxisome proliferator-activated receptor (PPAR) pathway may be the reason for lesions in LBP-/- rats. To further investigate the function of PPARα in sepsis, we inhibited mTOR with rapamycin and examined mitochondrial injury and ROS levels. The levels of mitochondrial damage and ROS were reduced after LBP-/- rats were pretreated with rapamycin in the context of LPS-induced sepsis. Inhibiting CYP4a2, one of the PPARα-target gene products, reduced the level of LPS-induced ROS in LBP-/- rats. CONCLUSION: LBP protects hepatic mitochondria against LPS-induced damage via the LBP-PPARα-CYP4a2 signaling pathway.


Subject(s)
Acute-Phase Proteins/physiology , Carrier Proteins/physiology , Cytochrome P-450 Enzyme System/physiology , Membrane Glycoproteins/physiology , Mitochondria, Liver/metabolism , Peroxisome Proliferator-Activated Receptors/physiology , Sepsis/metabolism , Signal Transduction/physiology , Animals , Disease Models, Animal , Rats
8.
J Immunol Res ; 2021: 8356645, 2021.
Article in English | MEDLINE | ID: mdl-35005033

ABSTRACT

Sepsis is an organ dysfunction caused by the dysregulated inflammatory response to infection. Lipopolysaccharide-binding protein (LBP) binds to lipopolysaccharide (LPS) and modulates the inflammatory response. A rare systematic study has been reported to detect the effect of LBP gene during LPS-induced sepsis. Herein, we explored the RNA sequencing technology to profile the transcriptomic changes in liver tissue between LBP-deficient rats and WT rats at multiple time points after LPS administration. We proceeded RNA sequencing of liver tissue to search differentially expressed genes (DEGs) and enriched biological processes and pathways between WT and LBP-deficient groups at 0 h, 6 h, and 24 h. In total, 168, 284, and 307 DEGs were identified at 0 h, 6 h, and 24 h, respectively, including Lrp5, Cyp7a1, Nfkbiz, Sigmar1, Fabp7, and Hao1, which are related to the inflammatory or lipid-related process. Functional enrichment analysis revealed that inflammatory response to LPS mediated by Ifng, Cxcl10, Serpine1, and Lbp was enhanced at 6 h, while lipid-related metabolism associated with C5, Cyp4a1, and Eci1 was enriched at 24 h after LPS administration in the WT samples. The inflammatory process was not found when the LBP gene was knocked out; lipid-related metabolic process and peroxisome proliferator-activated receptor (PPAR) signaling pathway mediated by Dhrs7b and Tysnd1 were significantly activated in LBP-deficient samples. Our study suggested that the invading LPS may interplay with LBP to activate the nuclear factor kappa B (NF-κB) signaling pathway and trigger uncontrolled inflammatory response. However, when inhibiting the activity of NF-κB, lipid-related metabolism would make bacteria removal via the effect on the PPAR signaling pathway in the absence of LBP gene. We also compared the serum lactate dehydrogenase (LDH) and alkaline phosphatase (ALP) levels using the biochemistry analyzer and analyzed the expression of high mobility group box 1 (HMGB1) and cleaved-caspase 3 with immunohistochemistry, which further validated our conclusion.


Subject(s)
Acute-Phase Proteins/metabolism , Carrier Proteins/metabolism , Liver Diseases/immunology , Liver/physiology , Membrane Glycoproteins/metabolism , Sepsis/immunology , Acute-Phase Proteins/genetics , Animals , Carrier Proteins/genetics , Gene Expression Regulation , Gene Knockout Techniques , Humans , Inflammation/genetics , Lipid Metabolism/genetics , Lipopolysaccharides/immunology , Liver Diseases/genetics , Male , Membrane Glycoproteins/genetics , RNA Interference , Rats , Rats, Sprague-Dawley , Sepsis/genetics
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