Target-induced activation of DNAzyme for sensitive detection of bleomycin by using a simple MOF-modified electrode.

In this work, a sensitive electrochemical method for bleomycin (BLM) determination was reported on the basis of BLM-mediated activation of Zn2+-dependent DNAzyme and the adsorption of signal probes by a metal-organic framework (MOF) modified electrode. Two hairpin DNAs were employed in this protocol, one (HP1) for BLM recognition and one (HP2) for amplified signal output. The presence of BLM and Fe2+ caused the formation of BLM-Fe (II) complex to cleave HP1, releasing DNAzyme fragments, which could further hybridize with substrate HP2 to form a partial double-stranded DNA duplex and enable the activation of Zn2+-dependent DNAzyme with the coexistence of Zn2+. The Zn2+-dependent DNAzyme catalyzed the cyclic cleavage of magnetic beads (MB)-immobilized HP2 to release massive DNA fragments with a Fc-labeled- terminal, which could be used for BLM quantification through electrochemical measurement after their adsorption on a MOF modified electrode. Attributing to the high catalytic efficiency of DNAzyme and excellent electrochemical performance of MOF modified electrode, our method revealed an impressive limit of detection as low as 4 pM BLM with a linear range of 5-2000 pM. Besides, the easy synthesis of MOF without further modification and the easy way of adsorption for signal achievement facilitated the operation process. In virtue of the high sensitivity, selectivity and the simple-to-implement features, this method is believed to hold a great promising application for BLM determination in biomedical and clinical study.

Impact of diverse background interferences on the alternating trilinear decomposition modeling of excitation-emission matrix fluorescence data acquired from different sample sources.

Alternating trilinear decomposition (ATLD) method enables the qualitative and quantitative analysis of excitation-emission matrix fluorescence (EEMF) data acquired from complex samples. However, the impact of diverse background interferences from different sample sources on the performances of ATLD method has never been lucubrated. In this work, simulated and real EEMF data sets from different sample sources with diverse background interferences were collected and subjected to ATLD analysis. The performances of ATLD modeling individual and global EEMF data sets were comprehensively compared in terms of the resolved spectral profiles and quantitative results. It was found that ATLD method can use the same set of calibration samples to resolve and quantify multiple components of interest in multiple complex systems with diverse background interferences, regardless of individual or global modeling. The results revealed that the qualitative and quantitative results provided by ATLD method were affected neither by diversity of background interferences nor by data merging as long as the acquired EEMF data sets conform to the trilinear component model. This property of ATLD method can enrich the "second-order advantage", i.e. the term "unknown interferences" in the concept of "second-order advantage" refers to not only constant background interferences but also diverse background interferences, which will be certain to further expand the practicality of ATLD method in complex sample analysis, especially in the field of fluorescence spectroscopy.

A dual-response biosensor for electrochemical and glucometer detection of DNA methyltransferase activity based on functionalized metal-organic framework amplification.

DNA methylation is catalyzed by DNA methyltransferase (MTase) and concerned with many biological processes including pathogenesis of various human diseases. The monitoring of MTase activity is thus of great significance in disease diagnosis and drug screening. Herein, we developed a facile way to synthesize biocompatible invertase enzyme modified metal-organic framework (Invertase/MOF) materials, and explored its application in constructing a dual-response Dam MTase sensor for the first time. By using them as signal probes, in which high density of metal sites could be electrochemically detected and invertase could hydrolyze sucrose into glucose for generation of glucometer signal output, dual-response for accurate detection of Dam MTase was realized. In the presence of Dam MTase, the methylation of hairpin probe 1 (HP1) occurred and thus caused the cleavage of HP1 assisted by a restriction endonuclease (DpnI) to produce the binding sequences. The binding sequences then hybridized with the electrode-assembled HP2 to expose their sticky termini which sequentially hybridized with the Invertase/MOFs-tethered capture probes. Finally, the electrodes were incubated with a sucrose solution, followed by the separate electrochemical and glucometer detection. The present assay brought good performance which could detect Dam MTase activity as low as 0.001 U mL-1 with wide linear range and good selectivity against other cytosine MTase (M.SssI MTase). Moreover, it also owns ability to be potentially applied for the inhibitors screening by utilization of 5-fluorouracil as an inhibitor model. The results imply that our proposed method provides a convenient platform for early cancer diagnosis and therapeutic applications.