Your browser doesn't support javascript.
loading
Show: 20 | 50 | 100
Results 1 - 20 de 24
Filter
Add more filters










Publication year range
1.
Blood ; 97(7): 2098-104, 2001 Apr 01.
Article in English | MEDLINE | ID: mdl-11264177

ABSTRACT

Deletions of the 13q14 chromosome region are associated with B-cell chronic lymphocytic leukemia (B-CLL) and several other types of cancer, suggesting the presence of a tumor suppressor gene. In previous studies the minimal region of deletion (MDR) was mapped to a less than 300-kilobase (kb) interval bordered by the markers 173a12-82 and 138G4/1.3R. For the identification of the putative tumor suppressor gene, the entire MDR (approximately 347 kb) has been sequenced, and transcribed regions have been identified by exon trapping, EST-based full-length complementary DNA cloning, database homology searches, and computer-assisted gene prediction analyses. The MDR contains 2 pseudogenes and 3 transcribed genes: CAR, encoding a putative RING-finger containing protein; 1B4/Leu2, generating noncoding transcripts; and EST70/Leu1, probably representing another noncoding gene (longest open reading frame of 78 codons). These genes have been sequenced in 20 B-CLL cases with 13q14 hemizygous deletion, and no mutations were found. Moreover, no somatic variants were found in the entire MDR analyzed for nucleotide substitutions by a combination of direct sequencing and fluorescence-assisted mismatch analysis in 5 B-CLL cases displaying 13q14-monoallelic deletion. The nondeleted allele of the CAR and EST70/Leu1 genes was expressed in B-CLL specimens, including those with monoallelic loss, whereas no expression of 1B4/Leu2 was detectable in B-CLL, regardless of the 13q14 status. These results indicate that allelic loss and mutation of a gene within the MDR is an unlikely pathogenetic mechanism for B-CLL. However, haplo-insufficiency of one of the identified genes may contribute to tumorigenesis. (Blood. 2001;97:2098-2104)


Subject(s)
Chromosomes, Human, Pair 13/genetics , DNA, Neoplasm/genetics , Gene Expression Regulation, Leukemic , Leukemia, Lymphocytic, Chronic, B-Cell/genetics , Animals , Base Sequence , Cell Transformation, Neoplastic/genetics , Chromosome Mapping , Chromosomes, Human, Pair 13/ultrastructure , DNA Mutational Analysis , DNA, Complementary/genetics , Expressed Sequence Tags , Genes, Tumor Suppressor , Humans , Mice , Molecular Sequence Data , Proteins/genetics , Pseudogenes , RNA, Long Noncoding , RNA, Messenger/biosynthesis , RNA, Messenger/genetics , RNA, Neoplasm/biosynthesis , RNA, Neoplasm/genetics , Sequence Deletion , Transcription, Genetic , Transferases , Tumor Suppressor Proteins
3.
Cancer Res ; 60(20): 5644-8, 2000 Oct 15.
Article in English | MEDLINE | ID: mdl-11059755

ABSTRACT

The cell of origin of B-cell chronic lymphocytic leukemia (B-CLL) is still uncertain. Recent studies have indicated that a fraction of B-CLL displays somatically mutated immunoglobulin variable heavy chain (IgV(H)) genes, which suggests an origin from a post-germinal center (GC) B cell. It has been shown that the 5' noncoding region of the BCL-6 proto-oncogene is affected by mutations in normal GC B-lymphocytes and in lymphoid malignancies displaying GC/post-GC phenotype. To further explore the cellular origin of B-CLL, we have analyzed 34 cases for mutations in the BCL-6 5' noncoding region and in the IgV(H) genes. We found somatically mutated IgV(H) genes in 24 (73%) of 33 samples (average frequency, 6.5 x 10(-2)/bp) and BCL-6 mutations in 8 (24%) of 34 cases (average frequency, 0.14 x 10(-2)/bp in the mutated cases). The occurrence of BCL-6 mutations was restricted to those cases displaying IgV(H) mutations. Analysis of BCL-6 protein expression as a marker of GC phenotype showed that, regardless of the presence of IgV(H) or BCL-6 mutations, B-CLLs express BCL-6 at levels clearly below those found in normal or transformed GC B cells. These results indicate that a subset of B-CLL derives from a cell that has been exposed to the somatic hypermutation mechanism and support the hypothesis that BCL-6 mutations result from the same process that targets immunoglobulin genes.


Subject(s)
DNA-Binding Proteins/genetics , Genes, Immunoglobulin/genetics , Immunoglobulin Heavy Chains/genetics , Immunoglobulin Variable Region/genetics , Leukemia, Lymphocytic, Chronic, B-Cell/genetics , Mutation , Proto-Oncogene Proteins/genetics , Transcription Factors/genetics , DNA-Binding Proteins/biosynthesis , Humans , Leukemia, Lymphocytic, Chronic, B-Cell/immunology , Leukemia, Lymphocytic, Chronic, B-Cell/metabolism , Proto-Oncogene Mas , Proto-Oncogene Proteins/biosynthesis , Proto-Oncogene Proteins c-bcl-6 , Transcription Factors/biosynthesis
4.
Hum Pathol ; 31(7): 871-3, 2000 Jul.
Article in English | MEDLINE | ID: mdl-10923927

ABSTRACT

Common-variable immunodeficiency (CVI) patients develop non-Hodgkin's lymphomas (NHL), mainly B-lineage diffuse large-cell lymphomas (DLCL), with a high relative risk. The molecular pathogenesis of CVI-related NHL (CVI-NHL) is unknown. Here we aimed at providing a detailed molecular characterization of CVI-NHL. Rearrangements of BCL-6 were detected in two thirds of CVI-NHL cases examined. All 3 CVI-NHL also harbored point mutations of the BCL-6 5' noncoding regions, which constitute a marker of B-cell transit through the germinal center (GC). The number and molecular pattern of BCL-6 mutations in CVI-NHL were similar to that detected in DLCL of immunocompetent hosts and in DLCL arising in other immunodeficiency settings. Microsatellite instability occurred in one CVI-NHL devoid of a BCL-6 rearrangement. All CVI-NHL scored negative for genetic lesions of BCL-2, p53, c-MYC, REL as well as for viral infection by EBV and HHV-8. Overall, these data indicate that: similarly to other immunodeficiency-related NHL, involvement of BCL6 occurs frequently also in CVI-NHL; and because BCL-6 mutations are acquired by B cells during GC transit, their occurrence in CVI-NHL suggest that these lymphomas are histogenetically related to GC B cells.


Subject(s)
Common Variable Immunodeficiency/complications , DNA-Binding Proteins/genetics , Lymphoma, Non-Hodgkin/genetics , Lymphoma, Non-Hodgkin/pathology , Mutation , Proto-Oncogene Proteins/genetics , Transcription Factors/genetics , Adult , Gene Rearrangement , Humans , Lymphoma, Non-Hodgkin/complications , Male , Microsatellite Repeats , Polymerase Chain Reaction , Proto-Oncogene Proteins c-bcl-6
6.
Haematologica ; 84(7): 582-8, 1999 Jul.
Article in English | MEDLINE | ID: mdl-10406897

ABSTRACT

BACKGROUND AND OBJECTIVE: Knowledge regarding the molecular pathogenesis and histogenesis of gastrointestinal mucosa-associated lymphoid tissue non-Hodgkin's lymphomas (MALT-NHL) is limited. Mutations of BCL-6, a zinc finger transcription factor implicated in lymphoid development, occur frequently in lymphomas and represent a histogenetic marker of B-cell transit through the germinal center. The distribution of BCL-6 mutations in gastrointestinal MALT-NHL was analyzed in this study. DESIGN AND METHODS: This study was based on 26 gastrointestinal MALT-NHL, including 16 cases of low grade histology and 10 cases of high grade histology. Mutations of BCL-6 were investigated by a combination of polymerase chain reaction-single strand conformation polymorphism and DNA direct sequencing analysis. RESULTS: Mutations of BCL-6 occurred in 6/10 high grade MALT-NHL, whereas they were absent from all low grade cases tested (n = 16; p = 0.001). MALT-NHL harboring BCL-6 mutations included 5 cases of gastric MALT-NHL and 1 case of jejunal MALT-NHL. Mutations were predominantly represented by single nucleotide substitutions which were multiple in most cases. All sequence alterations were unique to individual cases of gastrointestinal MALT-NHL. INTERPRETATION AND CONCLUSIONS: Mutations of BCL-6 occur frequently in high grade gastrointestinal MALT-NHL and display characteristics similar to those of BCL-6 mutations harbored by other B-cell lymphomas. The association of high grade MALT-NHL with BCL-6 mutations corroborates their histogenetic derivation from germinal center-related B-cells and may be of potential pathogenetic relevance for these disorders.


Subject(s)
DNA-Binding Proteins/genetics , Gastrointestinal Neoplasms/genetics , Gastrointestinal Neoplasms/pathology , Lymphoma, B-Cell, Marginal Zone/genetics , Lymphoma, B-Cell, Marginal Zone/pathology , Proto-Oncogene Proteins/genetics , Transcription Factors/genetics , Gene Frequency , Humans , Mutation , Proto-Oncogene Mas , Proto-Oncogene Proteins c-bcl-6
7.
Genes Chromosomes Cancer ; 24(1): 16-23, 1999 Jan.
Article in English | MEDLINE | ID: mdl-9892104

ABSTRACT

Human herpesvirus-8/Kaposi sarcoma-associated herpesvirus-positive primary effusion lymphoma (PEL) is a recently identified B-cell non-Hodgkin lymphoma category characterized by liquid growth in the serous body cavities. Apart from viral infection, no genetic alteration is known to be associated with PEL and no recurrent cytogenetic abnormality has been identified in these lymphomas. Yet the consistent monoclonality of PEL indicates that the disease is not solely a virus-driven proliferation. Here we report that PEL is associated with a high frequency of mutations of BCL6 5' noncoding regions, and we identify karyotypic abnormalities that may be recurrently involved in these lymphomas. Mutations of BCL-6 5' noncoding regions occurred in 8/13 PEL. Mutations occurred in the absence of BCL6 gross rearrangements were often multiple in the same patient (7/8 mutated cases), and occurred in both HIV-positive and HIV-negative individuals. Since BCL6 mutations are regarded as a genetic marker of B-cell transition through the germinal center (GC), these data are consistent with histogenetic derivation of PEL from GC or post-GC B-cells. Cytogenetic and FISH analysis of seven PEL cell lines showed frequent occurrence of complete or partial trisomy 12 (7/7 cases), trisomy 7 (4/7 cases), and abnormalities of bands Iq21-25 (5/7 cases).


Subject(s)
DNA-Binding Proteins/genetics , Genetic Predisposition to Disease/genetics , Herpesviridae Infections/etiology , Herpesvirus 8, Human/pathogenicity , Lymphoma/etiology , Mutation/genetics , Proto-Oncogene Proteins/genetics , Transcription Factors/genetics , 5' Untranslated Regions/genetics , DNA Mutational Analysis , Herpesviridae Infections/pathology , Humans , In Situ Hybridization, Fluorescence , Karyotyping , Lymphoma/genetics , Lymphoma/pathology , Proto-Oncogene Proteins c-bcl-6 , Tumor Cells, Cultured
8.
Proc Natl Acad Sci U S A ; 95(20): 11816-21, 1998 Sep 29.
Article in English | MEDLINE | ID: mdl-9751748

ABSTRACT

The molecular mechanism involved in the process of antigen-driven somatic hypermutation of Ig genes is unknown, but it is commonly believed that this mechanism is restricted to the Ig loci. B cell lymphomas commonly display multiple somatic mutations clustering in the 5'-regulatory region of BCL-6, a proto-oncogene encoding for a POZ/Zinc finger transcriptional repressor expressed in germinal center (GC) B cells and required for GC formation. To determine whether BCL-6 mutations represent a tumor-associated phenomenon or reflect a physiologic mechanism, we screened single human tonsillar GC B cells for mutations occurring in the BCL-6 5'-noncoding region and in the Ig variable heavy chain sequences. Thirty percent of GC B cells, but not naive B cells, displayed mutations in the 742 bp region analyzed within the first intron of BCL-6 (overall frequency: 5 x 10(-4)/bp). Accordingly, an expanded survey in lymphoid malignancies showed that BCL-6 mutations are restricted to B cell tumors displaying GC or post-GC phenotype and carrying mutated Ig variable heavy chain sequences. These results indicate that the somatic hypermutation mechanism active in GC B cells physiologically targets non-Ig sequences.


Subject(s)
B-Lymphocytes/immunology , B-Lymphocytes/metabolism , DNA-Binding Proteins/genetics , Genes, Immunoglobulin , Mutation , Proto-Oncogene Proteins/genetics , Transcription Factors/genetics , Cell Transformation, Neoplastic , Germinal Center/cytology , Humans , Immunoglobulin Heavy Chains/genetics , Immunoglobulin Variable Region/genetics , Leukemia, B-Cell/genetics , Leukemia, B-Cell/immunology , Lymphoma, B-Cell/genetics , Lymphoma, B-Cell/immunology , Neoplasms/genetics , Neoplasms/immunology , Polymerase Chain Reaction , Polymorphism, Single-Stranded Conformational , Proto-Oncogene Mas , Proto-Oncogene Proteins c-bcl-6
9.
Blood ; 92(7): 2294-302, 1998 Oct 01.
Article in English | MEDLINE | ID: mdl-9746767

ABSTRACT

Posttransplantation lymphoproliferative disorders (PT-LPDs) represent a heterogeneous group of Epstein-Barr virus-associated lymphoid proliferations that arise in immunosuppressed transplant recipients. Some of these lesions regress after a reduction in immunosuppressive therapy, whereas some progress despite aggressive therapy. Morphological, immunophenotypic, and immunogenotypic criteria have not been useful in predicting clinical outcome. Although structural alterations in oncogenes and/or tumor suppressor genes identified in some PT-LPDs correlate with a poor clinical outcome, the presence of these alterations has not been a consistently useful predictor of lesion regression after reduction of immunosuppression. We examined 57 PT-LPD lesions obtained from 36 solid organ transplant recipients for the presence of mutations in the BCL-6 proto-oncogene using single-strand conformation polymorphism and sequence analysis, followed by correlation with histopathologic classification and clinical outcome, which was known in 33 patients. BCL-6 gene mutations were identified in 44% of the specimens and in 44% of the patients; none were identified in the cases classified as plasmacytic hyperplasia. However, mutations were present in 43% of the polymorphic lesions and 90% of the PT-LPDs diagnosed as non-Hodgkin's lymphoma or multiple myeloma. BCL-6 gene mutations predicted shorter survival and refractoriness to reduced immunosuppression and/or surgical excision. Our results suggest that the BCL-6 gene structure is a reliable indicator for the division of PT-LPDs into the biological categories of hyperplasia and malignant lymphoma, of which only the former can regress on immune reconstitution. The presence of BCL-6 gene mutations may be a useful clinical marker to determine whether reduction in immunosuppression should be attempted or more aggressive therapy should be instituted.


Subject(s)
DNA, Neoplasm/genetics , DNA-Binding Proteins/genetics , Immunosuppressive Agents/therapeutic use , Lymphoproliferative Disorders/genetics , Postoperative Complications , Proto-Oncogene Proteins/genetics , Proto-Oncogenes , Transcription Factors/genetics , Transplantation/adverse effects , Cell Transformation, Neoplastic/genetics , Cell Transformation, Viral/genetics , DNA Mutational Analysis , Herpesviridae Infections/drug therapy , Herpesviridae Infections/mortality , Herpesviridae Infections/transmission , Herpesvirus 4, Human/pathogenicity , Humans , Hyperplasia , Life Tables , Lymphoma, B-Cell/etiology , Lymphoma, B-Cell/genetics , Lymphoma, B-Cell/mortality , Lymphoma, B-Cell/virology , Lymphoproliferative Disorders/drug therapy , Lymphoproliferative Disorders/etiology , Lymphoproliferative Disorders/mortality , Lymphoproliferative Disorders/virology , Polymorphism, Single-Stranded Conformational , Postoperative Complications/drug therapy , Postoperative Complications/etiology , Postoperative Complications/mortality , Postoperative Complications/virology , Prognosis , Proto-Oncogene Mas , Proto-Oncogene Proteins c-bcl-6 , Treatment Outcome , Tumor Virus Infections/drug therapy , Tumor Virus Infections/mortality , Tumor Virus Infections/transmission
10.
Leuk Lymphoma ; 31(1-2): 39-46, 1998 Sep.
Article in English | MEDLINE | ID: mdl-9720713

ABSTRACT

AIDS-related non-Hodgkin's lymphomas (AIDS-NHL) are classified into Burkitt's lymphoma, diffuse large cell lymphoma (DLCL), and body cavity based lymphoma. The molecular pathogenesis of AIDS-NHL is complex and involves the genetic alteration of several cancer related genes, including the BCL-6 proto-oncogene. BCL-6 encodes a zinc finger transcription factor which is selectively expressed by germinal center (GC) B-cells, but not by pre-GC or post-GC B-cells. Genetic alterations of BCL-6 occur frequently among B-cell NHL and comprise gross rearrangements as well as small mutations of the 5' noncoding region of the gene. Gross rearrangements of BCL-6 among AIDS-NHL cluster with 20% AIDS-DLCL. Conversely, mutations of the 5' noncoding region of BCL-6 occur at sustained frequency throughout the clinico-pathologic spectrum of AIDS-NHL and represent the most common genetic alteration presently detectable in these lymphomas. The frequency of BCL-6 mutations, as well as their location in the proximity of the BCL-6 regulatory regions, suggest that they may play a pathogenetic role in AIDS-related lymphomagenesis. Beside their pathogenetic implications, the occurrence of BCL-6 mutations among AIDS-NHL bears histogenetic relevance because BCL-6 mutations are regarded as a marker of B-cell transition through the GC. Thus, it is conceivable that a large fraction of AIDS-NHL is histogenetically related to GC or post-GC B-cells. This notion is further confirmed by the observation that AIDS-NHL frequently express the BCL-6 protein, which stains selectively GC B-cells throughout B-cell differentiation.


Subject(s)
Lymphoma, AIDS-Related/genetics , Proto-Oncogenes , Gene Rearrangement , Humans , Mutation , Proto-Oncogene Mas , Transcription Factors/genetics , Zinc Fingers
11.
Blood ; 92(3): 1011-9, 1998 Aug 01.
Article in English | MEDLINE | ID: mdl-9680371

ABSTRACT

Primary central nervous system lymphoma (PCNSL) is a major cause of morbidity and mortality among human immunodeficiency virus (HIV)-infected individuals. The precise histogenetic derivation and the molecular pathogenesis of PCNSL is poorly understood. In an attempt to clarify the histogenesis and pathogenesis of these lymphomas, 49 PCNSL (26 acquired immunodeficiency syndrome [AIDS]-related and 23 AIDS-unrelated) were analyzed for multiple biologic markers, which are known to bear histogenetic and pathogenetic significance for mature B-cell neoplasms. PCNSL associated frequently (50.0%) with mutations of BCL-6 5' noncoding regions, which are regarded as a marker of B-cell transition through the germinal center (GC). Expression of BCL-6 protein, which is restricted to GC B cells throughout physiologic B-cell maturation, was detected in 100% AIDS-unrelated PCNSL and in 56.2% AIDS-related cases. Notably, among AIDS-related PCNSL, expression of BCL-6 was mutually exclusive with expression of Epstein-Barr virus (EBV)-encoded latent membrane protein (LMP)-1 and, with few exceptions, also of BCL-2. All but one PCNSL expressed hMSH2, which among mature B cells selectively stains GC B cells. These data suggest that PCNSL may be frequently related to GC B cells and may be segregated into two major biologic categories based on the expression pattern of BCL-6, LMP-1, and BCL-2. BCL-6(+)/LMP-1(-)/BCL-2(-) PCNSL occur both in the presence and in the absence of HIV infection and consistently display a large noncleaved cell morphology. Conversely, BCL-6(-)/LMP-1(+)/BCL-2(+) PCNSL are restricted to HIV-infected hosts and are represented by lymphomas with immunoblastic features. These data are relevant for the pathogenesis and histogenesis of PCNSL and may be helpful to segregate distinct biologic and prognostic categories of these lymphomas.


Subject(s)
B-Lymphocyte Subsets/pathology , Biomarkers, Tumor/analysis , Central Nervous System Neoplasms/pathology , DNA-Binding Proteins/analysis , Germinal Center/pathology , Lymphoma, AIDS-Related/pathology , Lymphoma, B-Cell/pathology , Neoplasm Proteins/analysis , Proto-Oncogene Proteins c-bcl-2/analysis , Proto-Oncogene Proteins/analysis , Transcription Factors/analysis , Viral Matrix Proteins/analysis , B-Lymphocyte Subsets/virology , Central Nervous System Neoplasms/genetics , Central Nervous System Neoplasms/virology , Clone Cells/pathology , DNA, Neoplasm/analysis , Genes, myc , Herpesviridae Infections/genetics , Herpesviridae Infections/pathology , Herpesvirus 4, Human , Humans , Lymphoma, AIDS-Related/virology , Lymphoma, B-Cell/genetics , Lymphoma, B-Cell/virology , MutS Homolog 2 Protein , Organ Specificity , Proto-Oncogene Proteins c-bcl-6 , Tumor Virus Infections/genetics , Tumor Virus Infections/pathology
12.
Genomics ; 42(3): 369-77, 1997 Jun 15.
Article in English | MEDLINE | ID: mdl-9205107

ABSTRACT

Frequent deletions and loss of heterozygosity in a segment of chromosome 13 (13q14) in cases of B-cell chronic lymphocytic leukemia (CLL) have suggested that this malignancy is caused by inactivation of an unknown tumor suppressor gene located in this region. Toward the identification of the putative CLL tumor suppressor, we have constructed a high-resolution physical map of YAC, PAC, and cosmid contigs covering 600 kb of the 13q14 genomic region. In addition to densely positioned genetic markers and STSs, this map was further annotated by localization of 32 transcribed sequences (ESTs) using a combination of exon trapping, direct cDNA selection, sample sequencing of cosmids and PACs, and homology searches. On the basis of these mapping data, allelic loss analyses at 13q14 using CLL tumor samples allowed narrowing of the genomic segment encompassing the putative CLL gene to <300 kb. Twenty-three ESTs located within this minimally deleted region are candidate exons for the CLL-associated tumor suppressor gene.


Subject(s)
Chromosome Deletion , Chromosomes, Human, Pair 13 , Leukemia, Lymphocytic, Chronic, B-Cell/genetics , Alleles , Animals , Base Sequence , Cell Line , Chromosome Mapping , Cloning, Molecular , Cricetinae , DNA , Humans , Hybrid Cells , Molecular Sequence Data , Transcription, Genetic
13.
Blood ; 89(10): 3755-62, 1997 May 15.
Article in English | MEDLINE | ID: mdl-9160681

ABSTRACT

Acquired immunodeficiency syndrome (AIDS)-related non-Hodgkin's lymphomas (AIDS-NHL), a major source of morbidity and mortality among human immunodeficiency virus (HIV)-infected individuals, are derived from B cells and are classified into two major categories, Burkitt's lymphoma (BL) and diffuse large cell lymphoma (DLCL). Anaplastic large cell lymphoma (ALCL) and body-cavity-based lymphoma (BCBL) represent less frequent AIDS-NHL types. The molecular pathogenesis of AIDS-NHL is characterized by distinct genetic pathways, including chromosomal rearrangements of c-MYC and BCL-6 in AIDS-BL and AIDS-DLCL, respectively. In addition to gross rearrangements, recent evidence has suggested that BCL-6 may also be affected by mutations of the gene 5' noncoding regions. Here we have investigated the distribution of BCL-6 mutations in a panel representative of all the AIDS-NHL subtypes. Forty-three AIDS-NHL were analyzed for mutations in the first exon-first intron boundary region of BCL-6. Mutations were detected in all categories of AIDS-NHL (25 of 43 cases; 58%), including 12 of 20 AIDS-BL, 10 of 15 AIDS-DLCL, two of three AIDS-ALCL, and one of five of AIDS-BCBL. BCL-6 mutations occurred independent of BCL-6 rearrangements and presence of other genetic lesions frequently associated with AIDS-NHL. These results indicate that mutations of BCL-65' noncoding regions represent the most common genetic alteration presently detectable in AIDS-NHL. The frequency of these mutations, as well as their location in the proximity of BCL-6 regulatory sequences, suggest that they may play a role in AIDS-related lymphomagenesis.


Subject(s)
DNA, Neoplasm/genetics , DNA-Binding Proteins/genetics , Lymphoma, AIDS-Related/genetics , Lymphoma, B-Cell/genetics , Proto-Oncogene Proteins/genetics , Proto-Oncogenes , Transcription Factors/genetics , Biomarkers, Tumor/genetics , Burkitt Lymphoma/etiology , Burkitt Lymphoma/genetics , Cell Transformation, Neoplastic/genetics , DNA Mutational Analysis , Humans , Lymphoma, AIDS-Related/classification , Lymphoma, AIDS-Related/pathology , Lymphoma, B-Cell/classification , Lymphoma, B-Cell/etiology , Lymphoma, B-Cell/pathology , Lymphoma, Large B-Cell, Diffuse/etiology , Lymphoma, Large B-Cell, Diffuse/genetics , Lymphoma, Large-Cell, Anaplastic/etiology , Lymphoma, Large-Cell, Anaplastic/genetics , Polymerase Chain Reaction , Polymorphism, Single-Stranded Conformational , Proto-Oncogene Proteins c-bcl-6 , Tumor Cells, Cultured
14.
Ann Oncol ; 8 Suppl 2: 105-8, 1997.
Article in English | MEDLINE | ID: mdl-9209652

ABSTRACT

BACKGROUND: Non-Hodgkin's lymphoma (NHL) represents a major complication of AIDS. Systemic AIDS-related NHLs (AIDS-NHLs) derive from B cells and are classified into four distinct groups, including small noncleaved-cell lymphoma (SNCCL), diffuse large-cell lymphoma (DLCL), anaplastic large-cell lymphoma (ALCL), and body-cavity-based lymphoma (BCBL). The molecular pathogenesis of AIDS-NHL is characterized by the association of specific genetic lesions with distinct AIDS-NHL categories. Genetic lesions of AIDS-NHL involve proto-oncogenes (c-myc, Ras), tumor suppressor loci (p53, 6q), and viral infection (Epstein-Barr virus, human herpesvirus type 8). DESIGN: The aim of this work was to define the involvement of the bcl-6 gene in AIDS-related lymphomagenesis by investigating the distribution of bcl-6 structural alterations throughout the pathologic spectrum of AIDS-NHL. Both gross rearrangements and mutations in the 5' noncoding regions of the gene were investigated. RESULTS: Gross rearrangements of bcl-6 are confined to a fraction of AIDS-DLCL cases among AIDS-NHLs. Conversely, mutations of the 5' noncoding regions of bcl-6 are detected in a large proportion of AIDS-SNCCLs, AIDS-DLCLs and AIDS-ALCLs independent of the concomitant presence of bcl-6 rearrangements. CONCLUSIONS: Mutations of the 5' noncoding regions of bcl-6 represent the most frequent genetic lesion presently detectable among systemic AIDS-NHLs. The frequency of these mutations and their location in the proximity of bcl-6 regulatory regions suggest that they may play a role in AIDS-related lymphomagenesis.


Subject(s)
DNA-Binding Proteins/genetics , Lymphoma, AIDS-Related/genetics , Proto-Oncogene Proteins/genetics , Transcription Factors/genetics , Gene Rearrangement , Humans , Mutation , Proto-Oncogene Proteins c-bcl-6
15.
Leuk Lymphoma ; 23(1-2): 43-8, 1996 Sep.
Article in English | MEDLINE | ID: mdl-9021684

ABSTRACT

NF-kappa B transcription factors regulate the expression of a variety of genes involved in immune responses and cell growth. In higher vertebrates, the NF-kappa B family encompasses five distinct members. Three NF-kappa B proteins, p65/RelA, RelB, and c-rel/Rel, have high transactivating potential in addition to their DNA binding activity. Two subunits, NF-kappa B1p50 and NF-kappa B2p52, coded respectively by the NFKB1 and NFKB2 genes, may only have DNA binding activity. Moreover, p50 and p52 subunits are translated as precursors, respectively p105 and p100, which can be processed into the mature active forms by the removal of their carboxy-terminal ankyrin domain. The five proteins share a homologous amino-terminal domain (rel domain) involved in DNA binding, dimerization, nuclear transport, and binding of regulatory subunits. All members form homo- and heterodimeric complexes with different DNA binding specificity and transactivating potential. Structural alterations of some members of the NF-kappa B gene family have been observed in lymphoid malignancies. In particular, the NFKB2 gene, localized on chromosome 10q24, represents a candidate proto-oncogene, since it has been found rearranged in certain types of lymphoma and more commonly in cutaneous lymphoma. Molecular analysis indicated that these rearrangements may occur as a consequence of chromosomal translocations or small internal chromosomal deletions. Rearrangements cluster within the carboxy-terminal ankyrin domain of the NFKB2 gene leading to the production of carboxy-terminally truncated proteins which, in some cases, are fused to heterologous protein domains. Experimental data showed that these abnormal proteins are constitutively localized in the nucleus, have lost the transcriptional repressor functions typical of normal NF-kappa B2p52 and may be capable of transactivation activity. These findings suggest that abnormal NFKB2 proteins may contribute to lymphomagenesis by altering the NF-kappa B system, both quantitatively and qualitatively, and leading to the activation of specific subsets of kappa B-controlled genes.


Subject(s)
Gene Expression Regulation, Neoplastic/physiology , Lymphoma/genetics , NF-kappa B/genetics , Neoplasm Proteins/genetics , Proto-Oncogenes/genetics , Chromosome Mapping , Humans , Multigene Family , Proto-Oncogene Mas
17.
Proc Natl Acad Sci U S A ; 92(26): 12520-4, 1995 Dec 19.
Article in English | MEDLINE | ID: mdl-8618933

ABSTRACT

The BCL6 gene encodes a zinc-finger transcription factor and is altered by chromosomal arrangements in its 5' noncoding region in approximately 30% of diffuse large-cell lymphoma (DLCL). We report here that, in 22/30 (73%) DLCL and 7/15 (47%) follicular lymphoma (FL), but not in other tumor types, the BCL6 gene is also altered by multiple (1.4 x 10(-3) -1.6 x 10(-2) per bp), often biallelic, mutations clustering in its 5' noncoding region. These mutations are of somatic origin and are found in cases displaying either normal or rearranged BLC6 alleles indicating their independence from chromosomal rearrangements and linkage to immunoglobulin genes. These alterations identify a mechanism of genetic instability in malignant B cells and may have been selected during lymphomagenesis for their role in altering BCL6 expression.


Subject(s)
DNA-Binding Proteins/genetics , Lymphoma, B-Cell/genetics , Mutation , Proto-Oncogene Proteins/genetics , Proto-Oncogenes , Transcription Factors/genetics , Alleles , Base Sequence , DNA Primers , DNA-Binding Proteins/biosynthesis , Gene Expression Regulation, Neoplastic , Humans , Molecular Sequence Data , Point Mutation , Polymerase Chain Reaction , Polymorphism, Single-Stranded Conformational , Proto-Oncogene Proteins/biosynthesis , Proto-Oncogene Proteins c-bcl-6 , Restriction Mapping , Sequence Deletion , Transcription Factors/biosynthesis , Zinc Fingers
18.
Nucleic Acids Res ; 23(12): 2328-36, 1995 Jun 25.
Article in English | MEDLINE | ID: mdl-7541912

ABSTRACT

In order to clarify the transcriptional regulation of the NFKB2 gene (lyt-10, NF-kappa Bp100), we have characterized the structure and function of its promoter regions. Based on the nucleotide sequence of cDNA clones and the 5' flanking genomic region of the NFKB2 gene, RT-PCR analysis in a number of human cell lines demonstrated the presence of two alternative noncoding first exons (1a and 1b). Two distinct promoter regions, P1 and P2, were identified upstream of each exon, containing multiple sites of transcription initiation, as shown by RNase protection analysis. Sequence analysis of these regions showed a CAAT box upstream of exon 1a and high G-C content regions within both P1 and P2. Consensus binding sites for transcription factors, including SP1, AP1 and putative NF-kappa B (kappa B sites), were found upstream of each exon. In particular, six kappa B sites were identified, all but one of them capable of binding NF-kappa B complexes in vitro. Transfection in HeLa cells of plasmids containing P1 and P2 sequences linked to a chloramphenicol acetyltransferase reporter gene indicated that both P1 and P2 can act independently as promoters. Co-transfection of NF-kappa B effector plasmids (NF-kappa Bp52 and RelA) with a reporter gene linked to P1 and P2 showed that the NFKB2 promoter regions are regulated by NF-kappa B factors. RelA transactivates the NFKB2 promoter in a dose-dependent manner, whereas NF-kappa Bp52 acts as a repressor, indicating that the NFKB2 gene may be under the control of a negative feedback regulatory circuit.


Subject(s)
NF-kappa B/genetics , Promoter Regions, Genetic , Proto-Oncogene Proteins , Base Sequence , Binding Sites , Chloramphenicol O-Acetyltransferase/genetics , Consensus Sequence , DNA/chemistry , DNA/metabolism , Exons , HeLa Cells , Humans , Molecular Sequence Data , NF-kappa B/pharmacology , NF-kappa B p52 Subunit , Plasmids , Polymerase Chain Reaction , RNA-Directed DNA Polymerase , Restriction Mapping , Sequence Analysis, DNA , Transcription Factor RelA , Transfection
20.
Blood ; 84(11): 3850-60, 1994 Dec 01.
Article in English | MEDLINE | ID: mdl-7949142

ABSTRACT

The NFKB2(lyt-10) gene codes for a protein that is a member of the NK-kappa B/rel family of transcription factors containing a DNA-binding rel domain and a carboxy-terminal ankyrin-like domain. The NFKB2 gene represents a candidate proto-oncogene, since it has been found to be involved in a chromosomal translocation t(10;14)(q24;q32) in one case of B-cell lymphoma and in gene rearrangements in various types of lymphoid malignancies. To elucidate the structural and functional consequences of NFKB2 rearrangements, we report the molecular characterization of three novel rearranged NFKB2 genes in lymphoid tumors. In one case of multiple myeloma (MM), cloning and sequencing analysis of reciprocal breakpoint sites showed that they occurred within intron 15 of the NFKB2 gene and led to the complete deletion of the 3' portion of the gene coding for the ankyrin domain. Fluorescent in situ hybridization (FISH) analysis showed that the novel regions involved in the NFKB2 rearrangement originated from chromosome 7q34, thus implying the occurrence of a t(7;10)(q34;q24) reciprocal chromosomal translocation. In one case of T-cell cutaneous lymphoma (CTCL) and in one of B-cell chronic lymphocytic leukemia (B-CLL), NFKB2 rearrangements occurred, respectively, within exons 18 and 20 of the gene and involved recombinations with distinct regions of chromosome 10q24. Molecular analysis suggested that these rearrangements may occur as a consequence of small internal chromosomal deletions. In both of these cases, the rearrangements led to specific carboxy-terminal truncations of NFKB2 generating abnormal transcripts that coded for proteins lacking portions of the ankyrin domain. These proteins localize in the nucleus, suggesting their constitutive activation in vivo. Overall, our results indicate that NFKB2 rearrangements in lymphoid neoplasia may occur by heterogeneous mechanisms, including internal chromosomal deletion or chromosomal translocation. The common consequence of these rearrangements appears to be the deletion of 3' sequences of NFKB2 leading to the production of carboxy-truncated constitutively nuclear proteins that may be involved in tumorigenesis.


Subject(s)
Chromosome Aberrations , Chromosomes, Human, Pair 10/ultrastructure , Chromosomes, Human, Pair 7/ultrastructure , Leukemia, Lymphocytic, Chronic, B-Cell/genetics , Lymphoma, B-Cell/genetics , Lymphoma, T-Cell, Cutaneous/genetics , Multiple Myeloma/genetics , NF-kappa B/genetics , Neoplasm Proteins/genetics , Sequence Deletion , Skin Neoplasms/genetics , Translocation, Genetic , Amino Acid Sequence , Ankyrins/genetics , Base Sequence , DNA, Neoplasm/genetics , Gene Expression Regulation, Neoplastic , Gene Rearrangement , Genes , Humans , In Situ Hybridization, Fluorescence , Molecular Sequence Data , Proto-Oncogene Mas , Sequence Alignment , Sequence Homology, Nucleic Acid , Subcellular Fractions/chemistry
SELECTION OF CITATIONS
SEARCH DETAIL
...