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1.
Ultrasound Obstet Gynecol ; 64(1): 36-43, 2024 Jul.
Article in English | MEDLINE | ID: mdl-38339776

ABSTRACT

OBJECTIVE: Although remarkable strides have been made in fetal medicine and the prenatal diagnosis of congenital heart disease, around 60% of newborns with isolated coarctation of the aorta (CoA) are not identified prior to birth. The prenatal detection of CoA has been shown to have a notable impact on survival rates of affected infants. To this end, implementation of artificial intelligence (AI) in fetal ultrasound may represent a groundbreaking advance. We aimed to investigate whether the use of automated cardiac biometric measurements with AI during the 18-22-week anomaly scan would enhance the identification of fetuses that are at risk of developing CoA. METHODS: We developed an AI model capable of identifying standard cardiac planes and conducting automated cardiac biometric measurements. Our data consisted of pregnancy ultrasound image and outcome data spanning from 2008 to 2018 and collected from four distinct regions in Denmark. Cases with a postnatal diagnosis of CoA were paired with healthy controls in a ratio of 1:100 and matched for gestational age within 2 days. Cardiac biometrics obtained from the four-chamber and three-vessel views were included in a logistic regression-based prediction model. To assess its predictive capabilities, we assessed sensitivity and specificity on receiver-operating-characteristics (ROC) curves. RESULTS: At the 18-22-week scan, the right ventricle (RV) area and length, left ventricle (LV) diameter and the ratios of RV/LV areas and main pulmonary artery/ascending aorta diameters showed significant differences, with Z-scores above 0.7, when comparing subjects with a postnatal diagnosis of CoA (n = 73) and healthy controls (n = 7300). Using logistic regression and backward feature selection, our prediction model had an area under the ROC curve of 0.96 and a specificity of 88.9% at a sensitivity of 90.4%. CONCLUSIONS: The integration of AI technology with automated cardiac biometric measurements obtained during the 18-22-week anomaly scan has the potential to enhance substantially the performance of screening for fetal CoA and subsequently the detection rate of CoA. Future research should clarify how AI technology can be used to aid in the screening and detection of congenital heart anomalies to improve neonatal outcomes. © 2024 The Authors. Ultrasound in Obstetrics & Gynecology published by John Wiley & Sons Ltd on behalf of International Society of Ultrasound in Obstetrics and Gynecology.


Subject(s)
Aortic Coarctation , Artificial Intelligence , Fetal Heart , Ultrasonography, Prenatal , Humans , Female , Aortic Coarctation/diagnostic imaging , Aortic Coarctation/embryology , Pregnancy , Ultrasonography, Prenatal/methods , Fetal Heart/diagnostic imaging , Fetal Heart/embryology , Gestational Age , Biometry/methods , ROC Curve , Sensitivity and Specificity , Denmark , Infant, Newborn , Adult , Case-Control Studies , Predictive Value of Tests
2.
PeerJ ; 12: e16697, 2024.
Article in English | MEDLINE | ID: mdl-38282856

ABSTRACT

The aim of the study was to investigate changes in proline metabolism in seedlings of tree species during drought stress. One month old Paulownia tomentosa seedlings were exposed to moisture conditions at various levels (irrigation at 100, 75, 50 and 25% of field capacity), and then the material (leaves and roots) was collected three times at 10-day intervals. The activity of enzymes involved in proline metabolism was closely related to drought severity; however, proline content was not directly impacted. The activity of pyrroline-5-carboxylate synthetase (P5CS), which catalyzes proline biosynthesis, increased in response to hydrogen peroxide accumulation, which was correlated with soil moisture. In contrast, the activity of proline dehydrogenase (ProDH), which catalyzes proline catabolism, decreased. Compared to proline, the activity of these enzymes may be a more reliable biochemical marker of stress-induced oxidative changes. The content of proline is dependent on numerous additional factors, i.e., its degradation is an important alternative energy source. Moreover, we noted tissue-specific differences in this species, in which roots appeared to be proline biosynthesis sites and leaves appeared to be proline catabolism sites. Further research is needed to examine a broader view of proline metabolism as a cycle regulated by multiple mechanisms and differences between species.


Subject(s)
Droughts , Ligases , Pyrroles , Ligases/metabolism , Seedlings/metabolism , Proline , Oxidative Stress
3.
Sci Rep ; 12(1): 15556, 2022 09 16.
Article in English | MEDLINE | ID: mdl-36114227

ABSTRACT

Bryozoans were common benthic invertebrates in the Silurian seas. The large biodiversity among Silurian benthic organisms prompted diversified interactions, and as a result bryozoans hosted many other organisms as symbionts. Here we analyse the cystoporate bryozoan Fistulipora przhidolensis and unidentified trepostomes intergrown with auloporid tabulate corals and putative hydrozoans. The material comes from the uppermost Prídolí Series (Late Silurian) of the Sõrve Peninsula, Saaremaa, Estonia. Our analysis shows that the interaction was beneficial for both organisms-cnidarians benefited from feeding currents created by the host bryozoan, while the latter benefited from the protection from predators by cnidae, it can thus be classified as mutualism. Such associations are common in modern seas. The analysed organisms are typically encrusting when the symbiosis is absent, when intergrown they display erect, branching morphologies, raised over the substratum, thus exploiting a higher suspension-feeding tier. While similar associations were known from the Devonian, we demonstrate that this novel ecological strategy for greater resource exploitation started as early as the latest Silurian.


Subject(s)
Anthozoa , Bryozoa , Animals , Invertebrates , Oceans and Seas , Symbiosis
5.
Sci Rep ; 12(1): 1386, 2022 01 26.
Article in English | MEDLINE | ID: mdl-35082318

ABSTRACT

Biogenic reefs have been hotspots of biodiversity and evolutionary novelty throughout the Phanerozoic. The largest reef systems in Earth's history occurred in the Devonian period, but collapsed during the Late Devonian Mass Extinction. However, the consequences for the functional diversity of Palaeozoic reefs have received little attention. Here, we examine changes in the functional diversity of tabulate coral assemblages over a 35 million year period from the middle Devonian to the Carboniferous, straddling the multiphase extinction event to identify the causes and ecological consequences of the extinction for tabulate corals. By examining five key morphological traits, we show a divergent response of taxonomic and functional diversity to the mass extinction: taxonomic richness peaked during the Givetian (~ 388-383 Ma) and coincided with peak reef building, but functional diversity was only moderate because many species had very similar trait combinations. The collapse of taxonomic diversity and reef building in the late Devonian had minimal impact on functional richness of coral assemblages. However, non-random shifts towards species with larger corallites and lower colony integration suggest a shift from photosymbiotic to asymbiotic taxa associated over the study period. Our results suggest that the collapse of the huge Devonian reef systems was correlated with a breakdown of photosymbiosis and extinction of photosymbiotic tabulate coral taxa. Despite the appearance of new tabulate coral species over the next 35 million years, the extinction of taxa with photosymbiotic traits had long-lasting consequences for reef building and, by extension, shallow marine ecosystems in the Palaeozoic.

6.
Opt Express ; 29(24): 39486-39497, 2021 Nov 22.
Article in English | MEDLINE | ID: mdl-34809312

ABSTRACT

We theoretically and numerically study the efficiency of Brillouin-based opto-acoustic data storage in a photonic waveguide in the presence of thermal noise and laser phase noise. We compare the physics of the noise processes and how they affect different storage techniques, examining both amplitude and phase storage schemes. We investigate the effects of storage time and pulse properties on the quality of the retrieved signal and find that phase storage is less sensitive to thermal noise than amplitude storage.

7.
PLoS One ; 16(9): e0257523, 2021.
Article in English | MEDLINE | ID: mdl-34587221

ABSTRACT

Heterocorals represent an enigmatic group of Palaeozoic corals, known from relatively short time intervals in the Devonian and Carboniferous periods. The major differences between Heterocorallia and other Palaeozoic corals are the lack of an external theca (epitheca), lack of calices and the presence of dichotomously dividing septa-like structures. Heterocoral skeleton was presumably externally covered by the soft tissue and each branch of their skeleton has, until now, been regarded as a corallite-a skeleton of a single polyp. We investigated upper Famennian Oligophylloides from Morocco, focussing on branching processes, wall structure, previously poorly known initial growth stages and the growing tip, described here for the first time. We demonstrate that Oligophylloides shows a unique colony development not known in any group of anthozoans possessing a septate-like architecture and suggest that the previously postulated homology between true septa in hexa- and rugose corals on one hand, and Oligophylloides on the other, must be rejected. Based on the skeleton structure and branching patterns, we postulate, contrary to former ideas, that the stem and branches of heterocorals represent the skeleton of a multi-polyp colonial coral, similar to many extant octocorals. We found numerous potential homologies with octocoral skeletons (notably the Keratoisidinae within the Isididae) and, as a result, we propose the inclusion of the order Heterocorallia within the subclass Octocorallia. This suggestion requires, however, further research on the other taxa of heterocorals. We also propose some changes to the morphological terminology for the Heterocorallia.


Subject(s)
Anthozoa/anatomy & histology , Animals , Anthozoa/classification , Anthozoa/growth & development , Morocco , Phylogeny , Phylogeography
8.
Opt Lett ; 46(12): 2972-2975, 2021 Jun 15.
Article in English | MEDLINE | ID: mdl-34129587

ABSTRACT

Recent experiments demonstrating storage of optical pulses in acoustic phonons via stimulated Brillouin scattering raise questions about the spectral and temporal capacities of such protocols and the limitations of the theoretical frameworks routinely used to describe them. We consider the dynamics of photon-phonon scattering induced by optical pulses with temporal widths comparable to the period of acoustic oscillations. We revisit the widely adopted classical formalism of coupled modes and demonstrate its breakdown. We use a simple extension to the formulation and find potentially measurable consequences in the dynamics of Brillouin experiments involving ultrashort pulses.

9.
Opt Express ; 29(3): 3132-3146, 2021 Feb 01.
Article in English | MEDLINE | ID: mdl-33770919

ABSTRACT

We theoretically and numerically study the effects of thermal noise on pulses in backwards stimulated Brillouin scattering (SBS). Using a combination of stochastic calculus and numerical methods, we derive a theoretical model that can be used to quantitatively predict noise measurements. We study how the optical pulse configuration, including the input powers of the pump and Stokes fields, pulse durations and interaction time, affects the noise in the output Stokes field. We investigate the effects on the noise of the optical loss and waveguide length, and we find that the signal-to-noise ratio can be significantly improved, or reduced, for specific combinations of waveguide properties and pulse parameters.

10.
PLoS One ; 14(10): e0224248, 2019.
Article in English | MEDLINE | ID: mdl-31648249

ABSTRACT

The geologic history of the Southeastern United States of America is missing nearly 350-million-years of rocks, sediments, and fossils. This gap defines the Fall Line nonconformity where Upper Ordovician consolidated rocks are directly overlain by Upper Cretaceous unconsolidated sediments of the Atlantic Coastal Plain Province. Here we begin to fill in the missing geologic record by reporting the discovery of fossils of lower-to-middle Paleozoic tabulate corals (Syringophyllidae) in angular, quartz-rich, ferruginous sandstones that crop out in the Carolina Sandhills Physiographic Province that forms the updip margin of the Atlantic Coastal Plain Province near the Fall Line. These fossils of extinct tabulate corals are the first evidence that Paleozoic (Upper Ordovician-Lower Silurian) sandstones crop out amidst the mostly Mesozoic-to-Cenozoic deposits of the Atlantic Coastal Plain Province of the United States of America. This discovery of Paleozoic fossils and strata in a region in which they were previously entirely unknown offers a more complete insight into the geologic history of the Southern Appalachian Mountains Region, Carolina Sandhills and updip margin of the Atlantic Coastal Plain Province and extends the previously identified range of Syringophyllidae in North America.


Subject(s)
Anthozoa/growth & development , Biological Evolution , Fossils , Geologic Sediments/analysis , Paleontology , Animals , Southeastern United States
11.
Phys Rev Lett ; 121(6): 064301, 2018 Aug 10.
Article in English | MEDLINE | ID: mdl-30141687

ABSTRACT

In this work, we introduce an elastic analog of the Purcell effect and show theoretically that spherical nanoparticles can serve as tunable and robust antennas for modifying the emission from localized elastic sources. This effect can be qualitatively described by introducing elastic counterparts of the familiar electromagnetic parameters: local density of elastic states, elastic Purcell factor, and effective volume of elastic modes. To illustrate our framework, we consider the example of a submicron gold sphere as a generic elastic GHz antenna and find that shear and mixed modes of low orders in such systems offer considerable elastic Purcell factors. This formalism opens pathways towards extended control over dissipation of vibrations in various optomechanical systems and contributes to closing the gap between classical and quantum-mechanical treatments of phonons localized in elastic nanoresonators.

12.
Faraday Discuss ; 205: 31-65, 2017 12 04.
Article in English | MEDLINE | ID: mdl-28933479

ABSTRACT

The surface-enhanced Raman scattering (SERS) of molecular species in plasmonic cavities can be described as an optomechanical process where plasmons constitute an optical cavity of reduced effective mode volume which effectively couples to the vibrations of the molecules. An optomechanical Hamiltonian can address the full quantum dynamics of the system, including the phonon population build-up, the vibrational pumping regime, and the Stokes-anti-Stokes correlations of the photons emitted. Here we describe in detail two different levels of approximation to the methodological solution of the optomechanical Hamiltonian of a generic SERS configuration, and compare the results of each model in light of recent experiments. Furthermore, a phenomenological semi-classical approach based on a rate equation of the phonon population is demonstrated to be formally equivalent to that obtained from the full quantum optomechanical approach. The evolution of the Raman signal with laser intensity (thermal, vibrational pumping and instability regimes) is accurately addressed when this phenomenological semi-classical approach is properly extended to account for the anti-Stokes process. The formal equivalence between semi-classical and molecular optomechanics descriptions allows us to describe the vibrational pumping regime of SERS through the classical cross sections which characterize a nanosystem, thus setting a roadmap to describing molecular optomechanical effects in a variety of experimental situations.

13.
Materials (Basel) ; 10(8)2017 Aug 04.
Article in English | MEDLINE | ID: mdl-28777315

ABSTRACT

We experimentally demonstrate strong spectral selectivity of plasmonic interaction that occurs between α-NaYF4:Er3+/Yb3+ nanocrystals, which feature two emission bands, and spherical gold nanoparticles, with plasmon frequency resonant with one of the emission bands. Spatially-resolved luminescence intensity maps acquired for individual nanocrystals, together with microsecond luminescence lifetime images, show two qualitatively different effects that result from the coupling between plasmon excitations in metallic nanoparticles and emitting states of the nanocrystals. On the one hand, we observe nanocrystals, whose emission intensity is strongly enhanced for both resonant and non-resonant bands with respect to the plasmon resonance. Importantly, this increase is accompanied with shortening of luminescence decays times. In contrast, a significant number of nanocrystals exhibits almost complete quenching of the emission resonant with the plasmon resonance of gold nanoparticles. Theoretical analysis indicates that such an effect can occur for emitters placed at distances of about 5 nm from gold nanoparticles. While under these conditions, both transitions experience significant increases of the radiative emission rates due to the Purcell effect, the non-radiative energy transfer between resonant bands results in strong quenching, which in that situation nullifies the enhancement.

14.
Science ; 354(6313): 726-729, 2016 11 11.
Article in English | MEDLINE | ID: mdl-27846600

ABSTRACT

Trapping light with noble metal nanostructures overcomes the diffraction limit and can confine light to volumes typically on the order of 30 cubic nanometers. We found that individual atomic features inside the gap of a plasmonic nanoassembly can localize light to volumes well below 1 cubic nanometer ("picocavities"), enabling optical experiments on the atomic scale. These atomic features are dynamically formed and disassembled by laser irradiation. Although unstable at room temperature, picocavities can be stabilized at cryogenic temperatures, allowing single atomic cavities to be probed for many minutes. Unlike traditional optomechanical resonators, such extreme optical confinement yields a factor of 106 enhancement of optomechanical coupling between the picocavity field and vibrations of individual molecular bonds. This work sets the basis for developing nanoscale nonlinear quantum optics on the single-molecule level.

15.
ACS Nano ; 10(6): 6291-8, 2016 06 28.
Article in English | MEDLINE | ID: mdl-27203727

ABSTRACT

Plasmon-enhanced Raman scattering can push single-molecule vibrational spectroscopy beyond a regime addressable by classical electrodynamics. We employ a quantum electrodynamics (QED) description of the coherent interaction of plasmons and molecular vibrations that reveal the emergence of nonlinearities in the inelastic response of the system. For realistic situations, we predict the onset of phonon-stimulated Raman scattering and a counterintuitive dependence of the anti-Stokes emission on the frequency of excitation. We further show that this QED framework opens a venue to analyze the correlations of photons emitted from a plasmonic cavity.

16.
PLoS One ; 11(3): e0149767, 2016.
Article in English | MEDLINE | ID: mdl-27007689

ABSTRACT

Famennian tabulate corals were very rare worldwide, and their biodiversity was relatively low. Here we report a unique tabulate fauna from the mid- and late Famennian of the western part of the Holy Cross Mountains (Kowala and Ostrówka), Poland. We describe eight species (four of them new, namely ?Michelinia vinni sp. nov., Thamnoptychia mistiaeni sp. nov., Syringopora kowalensis sp. nov. and Syringopora hilarowiczi sp. nov.); the whole fauna consists of ten species (two others described in previous papers). These corals form two assemblages-the lower, mid-Famennian with Thamnoptychia and the upper, late Famennian with representatives of genera ?Michelinia, Favosites, Syringopora and ?Yavorskia. The Famennian tabulates from Kowala represent the richest Famennian assemblage appearing after the F/F crisis (these faunas appear some 10 Ma after the extinction event). Corals described here most probably inhabited deeper water settings, near the limit between euphotic and disphotic zones or slightly above. At generic level, these faunas show similarities to other Devonian and Carboniferous faunas, which might suggest their ancestry to at least several Carboniferous lineages. Tabulate faunas described here represent new recruits (the basin of the Holy Cross mountains was not a refuge during the F/F crisis) and have no direct evolutionary linkage to Frasnian faunas from Kowala. The colonization of the seafloor took place in two separate steps: first was monospecific assemblage of Thamnoptychia, and later came the diversified Favosites-Syringopora-Michelinia fauna.


Subject(s)
Anthozoa/growth & development , Animals , Biodiversity , Biological Evolution , Fossils , Phylogeny , Poland
17.
Nano Lett ; 16(4): 2533-42, 2016 Apr 13.
Article in English | MEDLINE | ID: mdl-26967047

ABSTRACT

We present a novel concept of a magnetically tunable plasmonic crystal based on the excitation of Fano lattice surface modes in periodic arrays of magnetic and optically anisotropic nanoantennas. We show how coherent diffractive far-field coupling between elliptical nickel nanoantennas is governed by the two in-plane, orthogonal and spectrally detuned plasmonic responses of the individual building block, one directly induced by the incident radiation and the other induced by the application of an external magnetic field. The consequent excitation of magnetic field-induced Fano lattice surface modes leads to highly tunable and amplified magneto-optical effects as compared to a continuous film or metasurfaces made of disordered noninteracting magnetoplasmonic anisotropic nanoantennas. The concepts presented here can be exploited to design novel magnetoplasmonic sensors based on coupled localized plasmonic resonances, and nanoscale metamaterials for precise control and magnetically driven tunability of light polarization states.

18.
Naturwissenschaften ; 103(3-4): 33, 2016 Apr.
Article in English | MEDLINE | ID: mdl-26983709

ABSTRACT

Colonial rugose corals are extremely rare in the fossil record after the Late Devonian (Frasnian-Famennian) extinction event. Here, we report a new genus and species, Famastraea catenata, from the late Famennian of the western part of the Holy Cross Mountains (Kowala) in Poland. Although this taxon is colonial, it displays many morphological characters very close to the typically late Famennian solitary species Palaeosmilia aquisgranensis (Frech, 1885), described earlier from the same locality. Hence, we postulate that F. catenata is derived from P. aquisgranensis. In contrast to other Famennian colonial rugose corals, the new taxon represents an example of local evolution within the group of so-called 'Strunian' corals. Consequently, we postulate that the new taxon represents a new colonial rugose fauna, which, however, did not survive the subsequent Late Devonian crisis (i.e. Hangenberg event). F. catenata most probably inhabited deeper water settings, possibly near the boundary between the euphotic and dysphotic zones, as inferred from many other benthic taxa described from this locality.


Subject(s)
Anthozoa/anatomy & histology , Anthozoa/classification , Biological Evolution , Animals , Extinction, Biological , Poland , Species Specificity
20.
J Phys Chem Lett ; 7(2): 354-62, 2016 Jan 21.
Article in English | MEDLINE | ID: mdl-26726134

ABSTRACT

We experimentally and theoretically investigate the interactions between localized plasmons in gold nanorods and excitons in J-aggregates under ambient conditions. Thanks to our sample preparation procedure we are able to track a clear anticrossing behavior of the hybridized modes not only in the extinction but also in the photoluminescence (PL) spectra of this hybrid system. Notably, while previous studies often found the PL signal to be dominated by a single mode (emission from so-called lower polariton branch), here we follow the evolution of the two PL peaks as the plasmon energy is detuned from the excitonic resonance. Both the extinction and PL results are in good agreement with the theoretical predictions obtained for a model that assumes two interacting modes with a ratio between the coupling strength and the plasmonic losses close to 0.4, indicative of the strong coupling regime with a significant Rabi splitting estimated to be ∼200 meV. The evolution of the PL line shape as the plasmon is detuned depends on the illumination wavelength, which we attribute to an incoherent excitation given by decay processes in either the metallic rods or the J-aggregates.


Subject(s)
Benzimidazoles/chemistry , Carbocyanines/chemistry , Fluorescent Dyes/chemistry , Gold/chemistry , Nanotubes/chemistry , Luminescence , Models, Theoretical , Spectrum Analysis
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