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1.
PLoS Comput Biol ; 7(8): e1002076, 2011 Aug.
Article in English | MEDLINE | ID: mdl-21829338

ABSTRACT

Immune synapses formed by T and NK cells both show segregation of the integrin ICAM1 from other proteins such as CD2 (T cell) or KIR (NK cell). However, the mechanism by which these proteins segregate remains unclear; one key hypothesis is a redistribution based on protein size. Simulations of this mechanism qualitatively reproduce observed segregation patterns, but only in certain parameter regimes. Verifying that these parameter constraints in fact hold has not been possible to date, this requiring a quantitative coupling of theory to experimental data. Here, we address this challenge, developing a new methodology for analysing and quantifying image data and its integration with biophysical models. Specifically we fit a binding kinetics model to 2 colour fluorescence data for cytoskeleton independent synapses (2 and 3D) and test whether the observed inverse correlation between fluorophores conforms to size dependent exclusion, and further, whether patterned states are predicted when model parameters are estimated on individual synapses. All synapses analysed satisfy these conditions demonstrating that the mechanisms of protein redistribution have identifiable signatures in their spatial patterns. We conclude that energy processes implicit in protein size based segregation can drive the patternation observed in individual synapses, at least for the specific examples tested, such that no additional processes need to be invoked. This implies that biophysical processes within the membrane interface have a crucial impact on cell:cell communication and cell signalling, governing protein interactions and protein aggregation.


Subject(s)
Computational Biology/methods , Image Processing, Computer-Assisted/methods , Immunological Synapses/metabolism , Cell Communication/physiology , Cell Line, Transformed , Computer Simulation , Extracellular Space/chemistry , Extracellular Space/metabolism , Humans , Immunological Synapses/chemistry , Intercellular Adhesion Molecule-1/metabolism , Killer Cells, Natural/metabolism , Kinetics , Membrane Proteins/chemistry , Membrane Proteins/metabolism , Particle Size , Pattern Recognition, Automated , Poisson Distribution , Protein Structure, Tertiary , T-Lymphocytes/metabolism , Thermodynamics
2.
PLoS One ; 5(11): e15374, 2010 Nov 05.
Article in English | MEDLINE | ID: mdl-21179506

ABSTRACT

It has been suggested that receptor-ligand complexes segregate or co-localise within immune synapses according to their size, and this is important for receptor signaling. Here, we set out to test the importance of receptor-ligand complex dimensions for immune surveillance of target cells by human Natural Killer (NK) cells. NK cell activation is regulated by integrating signals from activating receptors, such as NKG2D, and inhibitory receptors, such as KIR2DL1. Elongating the NKG2D ligand MICA reduced its ability to trigger NK cell activation. Conversely, elongation of KIR2DL1 ligand HLA-C reduced its ability to inhibit NK cells. Whereas normal-sized HLA-C was most effective at inhibiting activation by normal-length MICA, only elongated HLA-C could inhibit activation by elongated MICA. Moreover, HLA-C and MICA that were matched in size co-localised, whereas HLA-C and MICA that were different in size were segregated. These results demonstrate that receptor-ligand dimensions are important in NK cell recognition, and suggest that optimal integration of activating and inhibitory receptor signals requires the receptor-ligand complexes to have similar dimensions.


Subject(s)
HLA-C Antigens/metabolism , Histocompatibility Antigens Class I/metabolism , Killer Cells, Natural/metabolism , NK Cell Lectin-Like Receptor Subfamily K/metabolism , Receptors, KIR2DL1/metabolism , Signal Transduction , Amino Acid Sequence , Cell Line , HLA-C Antigens/genetics , Histocompatibility Antigens Class I/genetics , Humans , Ligands , Luminescent Proteins/genetics , Luminescent Proteins/metabolism , Lymphocyte Activation , Microscopy, Confocal , Molecular Sequence Data , NK Cell Lectin-Like Receptor Subfamily K/genetics , Protein Binding , Receptors, KIR2DL1/genetics , Recombinant Fusion Proteins/genetics , Recombinant Fusion Proteins/metabolism
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