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1.
bioRxiv ; 2023 Jun 06.
Article in English | MEDLINE | ID: mdl-37333143

ABSTRACT

Brain research is an area of research characterized by its cutting-edge nature, with brain mapping constituting a crucial aspect of this field. As sequencing tools have played a crucial role in gene sequencing, brain mapping largely depends on automated, high-throughput and high-resolution imaging techniques. Over the years, the demand for high-throughput imaging has scaled exponentially with the rapid development of microscopic brain mapping. In this paper, we introduce the novel concept of confocal Airy beam into oblique light-sheet tomography named CAB-OLST. We demonstrate that this technique enables the high throughput of brain-wide imaging of long-distance axon projection for the entire mouse brain at a resolution of 0.26 µm × 0.26 µm × 1.06 µm in 58 hours. This technique represents an innovative contribution to the field of brain research by setting a new standard for high-throughput imaging techniques.

2.
Nature ; 598(7879): 159-166, 2021 10.
Article in English | MEDLINE | ID: mdl-34616071

ABSTRACT

An essential step toward understanding brain function is to establish a structural framework with cellular resolution on which multi-scale datasets spanning molecules, cells, circuits and systems can be integrated and interpreted1. Here, as part of the collaborative Brain Initiative Cell Census Network (BICCN), we derive a comprehensive cell type-based anatomical description of one exemplar brain structure, the mouse primary motor cortex, upper limb area (MOp-ul). Using genetic and viral labelling, barcoded anatomy resolved by sequencing, single-neuron reconstruction, whole-brain imaging and cloud-based neuroinformatics tools, we delineated the MOp-ul in 3D and refined its sublaminar organization. We defined around two dozen projection neuron types in the MOp-ul and derived an input-output wiring diagram, which will facilitate future analyses of motor control circuitry across molecular, cellular and system levels. This work provides a roadmap towards a comprehensive cellular-resolution description of mammalian brain architecture.


Subject(s)
Motor Cortex/anatomy & histology , Motor Cortex/cytology , Neurons/classification , Animals , Atlases as Topic , Female , GABAergic Neurons/cytology , GABAergic Neurons/metabolism , Glutamates/metabolism , Male , Mice , Mice, Inbred C57BL , Neuroimaging , Neurons/cytology , Neurons/metabolism , Organ Specificity , Sequence Analysis, RNA , Single-Cell Analysis
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