Effect of hormonal stimulation on captive broodstock maturation, induced breeding and spawning performance of striped snakehead, Channa striata (Bloch, 1793).

In the present study, there was assessment of effects of gonadotropin treatments on broodstock maturation, induced breeding, and spawning outcomes of striped snakehead in captivity. The striped snakehead (n = 128) were equally distributed in four concrete tanks (15 m2) and hormone implants (500 IU human chorionic gonadotropin (hCG)/kg body weight) were inserted intramuscularly and striped snakehead broodstock administered this treatment were confined in two tanks and striped snakehead of a non-implanted group were confined in two tanks. The hormone implanted striped snakehead had a greater (P < 0.05) gonadosomatic index (GSI) and oocyte diameter in comparison to non-implanted striped snakehead. In a subsequent experiment, hCG and carp pituitary homogenate (CPH) were evaluated for inducing breeding. Dosages of hCG used were, 2,000 (TH1), 3000 (TH2), and 4000 (TH3) IU hCG/kg body weight of females. Dosages of CPH were, 20 (TP1), 30 (TP2), and 40 (TP3) mg CPH/kg body weight of females. Males were administered 0.75 of the dosage administered to females. The values for reproductive variables were estimated. Fertilization (89.0 ±â€¯3.0 %) and hatching (92.0 ±â€¯1.0 %) rates were greater (P < 0.05) in the TH1 group of implanted striped snakehead. Relative fecundity (19,023 ±â€¯2211), as well as fertilization (96.2 ±â€¯2.4 %), and hatching (96.6 ±â€¯1.7 %) rates were greater in the TP2 group of the implanted striped snakehead. The results from the present study indicate broodstock treated with gonadotropins had greater spawning outcomes which might facilitate mass scale breeding and fertilized egg as well as juvenile production of striped snakehead in captivity.

Author Correction: On the processes influencing rapid intensity changes of tropical cyclones over the Bay of Bengal.

An amendment to this paper has been published and can be accessed via a link at the top of the paper.

On the processes influencing rapid intensity changes of tropical cyclones over the Bay of Bengal.

We present a numerical investigation of the processes that influenced the contrasting rapid intensity changes in Tropical Cyclones (TC) Phailin and Lehar (2013) over the Bay of Bengal. Our emphasis is on the significant differences in the environments experienced by the TCs within a few weeks and the consequent differences in their organization of vortex-scale convection that resulted in their different rapid intensity changes. The storm-relative proximity, intensity, and depth of the subtropical ridge resulted in the establishment of a low-sheared environment for Phailin and a high-sheared environment for Lehar. Our primary finding here is that in Lehar's sheared vortex, the juxtaposition in the azimuthal phasing of the asymmetrically distributed downward eddy flux of moist-entropy through the top of the boundary layer, and the radial eddy flux of moist-entropy within the boundary layer in the upshear left-quadrant of Lehar (40-80 km radius) establishes a pathway for the low moist-entropy air to intrude into the vortex from the environment. Conversely, when the azimuthal variations in boundary layer moist-entropy, inflow, and convection are weak in Phailin's low-sheared environment, the inflow magnitude and radial location of boundary layer convergence relative to the radius of maximum wind dictated the rapid intensification.

High-resolution gridded soil moisture and soil temperature datasets for the Indian monsoon region.

High-resolution soil moisture/temperature (SM/ST) are critical components of the growing demand for fine-scale products over the Indian monsoon region (IMR) which has diverse land-surface characteristics. This demand is fueled by findings that improved representation of land-state help improve rainfall/flood prediction. Here we report on the development of a high-resolution (4 km and 3 hourly) SM/ST product for 2001-2014 during Indian monsoon seasons (June-September). First, the quality of atmospheric fields from five reanalysis sources was examined to identify realistic forcing to a land data assimilation system (LDAS). The evaluation of developed SM/ST against observations highlighted the importance of quality forcing fields. There is a significant relation between the forcing error and the errors in the SM/ST. A combination of forcing fields was used to develop 14-years of SM/ST data. This dataset captured inter-annual, intra-seasonal, and diurnal variations under different monsoon conditions. When the mesoscale model was initialized using the SM/ST data, improved simulations of heavy rain events was evident, demonstrating the value of the data over IMR.

Improved prediction of severe thunderstorms over the Indian Monsoon region using high-resolution soil moisture and temperature initialization.

The hypothesis that realistic land conditions such as soil moisture/soil temperature (SM/ST) can significantly improve the modeling of mesoscale deep convection is tested over the Indian monsoon region (IMR). A high resolution (3 km foot print) SM/ST dataset prepared from a land data assimilation system, as part of a national monsoon mission project, showed close agreement with observations. Experiments are conducted with (LDAS) and without (CNTL) initialization of SM/ST dataset. Results highlight the significance of realistic land surface conditions on numerical prediction of initiation, movement and timing of severe thunderstorms as compared to that currently being initialized by climatological fields in CNTL run. Realistic land conditions improved mass flux, convective updrafts and diabatic heating in the boundary layer that contributed to low level positive potential vorticity. The LDAS run reproduced reflectivity echoes and associated rainfall bands more efficiently. Improper representation of surface conditions in CNTL run limit the evolution boundary layer processes and thereby failed to simulate convection at right time and place. These findings thus provide strong support to the role land conditions play in impacting the deep convection over the IMR. These findings also have direct implications for improving heavy rain forecasting over the IMR, by developing realistic land conditions.

Impact of parameterization of physical processes on simulation of track and intensity of tropical cyclone Nargis (2008) with WRF-NMM model.

The present study is carried out to investigate the performance of different cumulus convection, planetary boundary layer, land surface processes, and microphysics parameterization schemes in the simulation of a very severe cyclonic storm (VSCS) Nargis (2008), developed in the central Bay of Bengal on 27 April 2008. For this purpose, the nonhydrostatic mesoscale model (NMM) dynamic core of weather research and forecasting (WRF) system is used. Model-simulated track positions and intensity in terms of minimum central mean sea level pressure (MSLP), maximum surface wind (10 m), and precipitation are verified with observations as provided by the India Meteorological Department (IMD) and Tropical Rainfall Measurement Mission (TRMM). The estimated optimum combination is reinvestigated with six different initial conditions of the same case to have better conclusion on the performance of WRF-NMM. A few more diagnostic fields like vertical velocity, vorticity, and heat fluxes are also evaluated. The results indicate that cumulus convection play an important role in the movement of the cyclone, and PBL has a crucial role in the intensification of the storm. The combination of Simplified Arakawa Schubert (SAS) convection, Yonsei University (YSU) PBL, NMM land surface, and Ferrier microphysics parameterization schemes in WRF-NMM give better track and intensity forecast with minimum vector displacement error.

Comparison of thunderstorm simulations from WRF-NMM and WRF-ARW models over East Indian Region.

The thunderstorms are typical mesoscale systems dominated by intense convection. Mesoscale models are essential for the accurate prediction of such high-impact weather events. In the present study, an attempt has been made to compare the simulated results of three thunderstorm events using NMM and ARW model core of WRF system and validated the model results with observations. Both models performed well in capturing stability indices which are indicators of severe convective activity. Comparison of model-simulated radar reflectivity imageries with observations revealed that NMM model has simulated well the propagation of the squall line, while the squall line movement was slow in ARW. From the model-simulated spatial plots of cloud top temperature, we can see that NMM model has better captured the genesis, intensification, and propagation of thunder squall than ARW model. The statistical analysis of rainfall indicates the better performance of NMM than ARW. Comparison of model-simulated thunderstorm affected parameters with that of the observed showed that NMM has performed better than ARW in capturing the sharp rise in humidity and drop in temperature. This suggests that NMM model has the potential to provide unique and valuable information for severe thunderstorm forecasters over east Indian region.

Progressive changes in arch width from primary to early mixed dentition period: a longitudinal study.

OBJECTIVE: The present study was conducted to evaluate, on a longitudinal basis, the changes in intercanine and intermolar widths form the primary to the early mixed dentition periods. MATERIALS AND METHODS: A total of 38 children aged 4-5 years, with normal occlusion without any proximal caries or any dental anomalies, were selected. The impressions were recorded and casts were prepared. Intercanine and intermolar widths were measured on these dental casts with the help of a digital vernier calliper. After 3 years follow-up, the impressions were recorded again and dental casts were prepared. Intercanine and intermolar widths were measured again at this stage and were compared with the baseline data using the paired t-test and the chi square test. RESULTS: There is a significant increase in the intercanine (3.93 + 1.70 mm) and intermolar width (1.49 + 1.77 mm) during the transition period from primary to early mixed dentition in both the arches and both the sexes. The gender-wise comparison showed a greater increase in males than in females, but this was not statistically significant. CONCLUSION: A thorough knowledge of growth changes during various stages of the mixed dentition period are important for a pediatric dentist to make an accurate diagnosis and treatment planning during preventive and interceptive orthodontics.

Polyelectrolyte behavior and kinetics of aminoacyl-tRNA on the ribosome.

The torque acting on cognate (three base pairs that are matched) "ternary complex" consisting of elongation factor-Tu, guanosine-5'-triphosphate GTP, and aminoacyl-transfer RNA due to induced wrapping of the 30S subunit of the ribosome and the speed with which the ternary complex samples the space allowed by diffusion is determined. Under appropriate conditions, mode coupling speeds up the barrier crossing rate for cognate relative to near-cognate ternary complexes. We determine the flexibility of the ternary complex relative to transfer RNA (tRNA) by a coarse-grained model. We predict the magnesium binding sites in the ternary complex at low magnesium concentration and unravel the nature of the interaction energy of magnesium with site-specific tRNAPhe bases.

Thermodynamic interpretation of the scaling of the dynamics of supercooled liquids.

The recently discovered scaling law for the relaxation times, tau(T,upsilon) = I(Tupsilon(gamma)), where T is temperature and upsilon the specific volume, is derived by a revision of the entropy model of the glass transition dynamics originally proposed by Avramov [J. Non-Cryst. Solids 262, 258 (2000)]. In this modification the entropy is calculated by an alternative route. The resulting expression for the variation of the relaxation time with T and upsilon is shown to accurately fit experimental data for several glass-forming liquids and polymers over an extended range encompassing the dynamic crossover. From this analysis, which is valid for any model in which the relaxation time is a function of the entropy, we find that the scaling exponent gamma can be identified with the Gruneisen constant.

Prevalence of supernumerary teeth in deciduous and mixed dentition.

Supernumerary teeth are the extra teeth which may have either erupted or unerupted in addition to normal dentition and are seen both in deciduous as well as permanent dentition. The incidence of supernumerary teeth shows more frequent occurrence in permanent dentition than deciduous dentition, affecting both the sexes. The etiology of supernumerary teeth is still unknown and not well understood, but thought to be the result from disturbance during the initiation and proliferation stages of tooth development. In the present study an attempt has been made to asses, its prevalence in deciduous and mixed dentition phase.

On the nature of a glassy state of matter in a hydrated protein: Relation to protein function.

Diverse biochemical and biophysical experiments indicate that all proteins, regardless of size or origin, undergo a dynamic transition near 200 K. The cause of this shift in dynamic behavior, termed a "glass transition," and its relation to protein function are important open questions. One explanation postulated for the transition is solidification of correlated motions in proteins below the transition. We verified this conjecture by showing that crambin's radius of gyration (Rg) remains constant below approximately 180 K. We show that both atom position and dynamics of protein and solvent are physically coupled, leading to a novel cooperative state. This glassy state is identified by negative slopes of the Debye-Waller (B) factor vs. temperature. It is composed of multisubstate side chains and solvent. Based on generalization of Adam-Gibbs' notion of a cooperatively rearranging region and decrease of the total entropy with temperature, we calculate the slope of the Debye-Waller factor. The results are in accord with experiment.

Relationship between dynamical and equilibrium characteristics of glass-forming polymeric liquids.

A connection between measurable equilibrium thermodynamic quantities and a nonequilibrium property of supercooled polymeric liquids, namely, the fragility index, is proposed within the framework of a synthesis of generalized configurational entropy models. The theoretical predictions are compared with experimental data on five glass-forming polymers.

On the characteristics of migration of oligomeric DNA in polyacrylamide gels and in free solution.

We review a model for the free-solution electrophoretic mobility of oligomeric double-stranded (ds) DNA. We have found that the free-solution mobility of ds DNA increases as the molecular weight of the fragment increases, up to a few hundred base pairs. This insight is combined with recent advances in the nature of counterion condensation theory of very short DNA fragments to describe quantitatively the electrophoretic mobility of oligomeric single-stranded DNA in polyacrylamide gels. The model predicts, in agreement with recent experiments, that significant anomalous migration exists with short DNA sequences, the onset of which is dependent on the size of polyacrylamide gel pores. For terminal phosphate-labeled DNA fragments, the free-solution mobility is no longer proportional to the ratio of the total effective charge and the friction coefficient. These changes in properties affect the characteristics of migration of end-labeled DNA fragments in polyacrylamide gels.

Anomalous Migration of Short Sequences of DNA: Comparison of Theory and Experiment.

Abstract A new model to replace the Ogstron and tube reptation models for gel retardation of DNA is proposed that explicitly takes into account screening of the hydrodynamic interactions and polyelectrolyte effects. At short DNA sequence lengths, significant anomalous migration is predicted whose onset is dependent on the size of polyacrylamide gel pores. Thus, a 2-residue fragment has the same electrophoretic mobility as a 12-residue fragment for a polyacrylamide gel with a mesh size of 60Å. The oligonucleotide length at which anomalous migration is observed also depends on pore size. Experimental measurement of gel mobility for DNA fragments of the form N(pN)(n), where n = 1-11, 14 and 19 substantiate this phenomenon.

Dressed polyions, counterion condensation, and adsorption excess in polyelectrolyte solutions.

The phenomenon of Manning-Oosawa counterion condensation is given an explicit statistical mechanical and qualitative basis via a dressed polyelectrolyte formalism in connection with the topology of the electrostatic free-energy surface and is derived explicitly in terms of the adsorption excess of ions about the polyion via the nonlinear Poisson-Boltzmann equation. The approach is closely analogous to the theory of ion binding in micelles. Our results not only elucidate a Poisson-Boltzmann analysis, which shows that a fraction of the counterions lie within a finite volume around the polyion even if the volume of the system tends towards infinity, but also provide a direct link between Manning's theta-the number of condensed counterions for each polyion site-and a statistical thermodynamic quantity, namely, the adsorption excess per monomer.

Polarization of counterions in polyelectrolytes.

A theory of the polarization of counterions bound to a polyion, such as a DNA, in low and high electric field strengths is developed using statistical mechanics of inhomogeneous systems. For low fields, one finds that the polarizability p is (Zq)2rho0betaL3/(12[l + Lrho0sigma(L, b, xi, Z, I, rho0)]), where sigma = integral1 0(lambda' - lambda0) ¿dc(lambda - lambda')/dlambda¿lambda = lambda0 dlambda']), Z and L are the valence and the length of the polyion, respectively, q is the proton charge, beta = 1/kBT, T is the temperature, kB is the Boltzmann constant, I is the ionic strength, lambda = x/L and lambda0 = x0/L are scaled distances, x0 is a reference point such that the inhomogeneous counterion density at x0 is equal to rho0--the uniform density in the absence of an electric field E--and c(x) is the direct correlation function of the homogeneous counterion-polyion phase, which includes attractive and repulsive interactions. If Lsigma(L, ...) is much less than one, then the polarizability is proportional to L3. If the term Lsigma(L, ...) is much larger than one, the polarizability scales as L2. The induced dipole moment saturates and its value is the same as that of Mandel-Manning theories. The onset of the saturation, however, depends critically on the direct correlation function and hence polyelectrolyte effects. In the formalism, the polarization of the counterions is the equilibrium response to an electric field provided E is less than Esaturated. A dynamical scheme that incorporates the fact that in high fields the bound counterions conduct is discussed.

Low-temperature relaxation and entropic barriers in supercooled liquids.

The low-temperature relaxation dynamics of supercooled liquids are a long-standing theoretical problem of considerable interest. The vast amount of experimental data on such liquids indicates that viscosity and diffusion in supercooled liquids are non-Arrhenius over a wide range of temperatures. The non-Arrhenius temperature dependence of the relaxation time of the slow modes in glass-forming liquids is investigated in connection with the topology of the potential energy landscape in configuration space. An analogy is made between the derived dynamical equations and Cooper's formulation of the pair equation in superconductivity.