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1.
Proc Natl Acad Sci U S A ; 121(17): e2312330121, 2024 Apr 23.
Article in English | MEDLINE | ID: mdl-38625936

ABSTRACT

The apolipoprotein B messenger RNA editing enzyme, catalytic polypeptide (APOBEC) family is composed of nucleic acid editors with roles ranging from antibody diversification to RNA editing. APOBEC2, a member of this family with an evolutionarily conserved nucleic acid-binding cytidine deaminase domain, has neither an established substrate nor function. Using a cellular model of muscle differentiation where APOBEC2 is inducibly expressed, we confirmed that APOBEC2 does not have the attributed molecular functions of the APOBEC family, such as RNA editing, DNA demethylation, and DNA mutation. Instead, we found that during muscle differentiation APOBEC2 occupied a specific motif within promoter regions; its removal from those regions resulted in transcriptional changes. Mechanistically, these changes reflect the direct interaction of APOBEC2 with histone deacetylase (HDAC) transcriptional corepressor complexes. We also found that APOBEC2 could bind DNA directly, in a sequence-specific fashion, suggesting that it functions as a recruiter of HDAC to specific genes whose promoters it occupies. These genes are normally suppressed during muscle cell differentiation, and their suppression may contribute to the safeguarding of muscle cell fate. Altogether, our results reveal a unique role for APOBEC2 within the APOBEC family.


Subject(s)
Chromatin , Muscle Proteins , APOBEC Deaminases/genetics , APOBEC-1 Deaminase/genetics , Cell Differentiation/genetics , Chromatin/genetics , Cytidine Deaminase/metabolism , DNA , Muscle Fibers, Skeletal/metabolism , Muscle Proteins/metabolism , Myoblasts/metabolism , RNA, Messenger/genetics , Animals , Mice
2.
PLoS One ; 8(6): e65235, 2013.
Article in English | MEDLINE | ID: mdl-23776455

ABSTRACT

Dying-back degeneration of motor neuron axons represents an established feature of familial amyotrophic lateral sclerosis (FALS) associated with superoxide dismutase 1 (SOD1) mutations, but axon-autonomous effects of pathogenic SOD1 remained undefined. Characteristics of motor neurons affected in FALS include abnormal kinase activation, aberrant neurofilament phosphorylation, and fast axonal transport (FAT) deficits, but functional relationships among these pathogenic events were unclear. Experiments in isolated squid axoplasm reveal that FALS-related SOD1 mutant polypeptides inhibit FAT through a mechanism involving a p38 mitogen activated protein kinase pathway. Mutant SOD1 activated neuronal p38 in mouse spinal cord, neuroblastoma cells and squid axoplasm. Active p38 MAP kinase phosphorylated kinesin-1, and this phosphorylation event inhibited kinesin-1. Finally, vesicle motility assays revealed previously unrecognized, isoform-specific effects of p38 on FAT. Axon-autonomous activation of the p38 pathway represents a novel gain of toxic function for FALS-linked SOD1 proteins consistent with the dying-back pattern of neurodegeneration characteristic of ALS.


Subject(s)
Amyotrophic Lateral Sclerosis/metabolism , Amyotrophic Lateral Sclerosis/pathology , Axonal Transport/drug effects , Nerve Degeneration/pathology , Superoxide Dismutase/toxicity , p38 Mitogen-Activated Protein Kinases/metabolism , Animals , Axonal Transport/physiology , Decapodiformes , Immunohistochemistry , Kinesins/antagonists & inhibitors , Kinesins/metabolism , Mass Spectrometry , Mice , Mutation/genetics , Phosphorylation , Spinal Cord/metabolism , Superoxide Dismutase/genetics , Superoxide Dismutase/metabolism , Superoxide Dismutase-1
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