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1.
Anal Sci ; 40(1): 101-113, 2024 Jan.
Article in English | MEDLINE | ID: mdl-37819571

ABSTRACT

With the prevalence of glucosamine- and chondroitin-containing dietary supplements for people with osteoarthritis in the marketplace, it is important to have an accurate and reproducible analytical method for the quantitation of these compounds in finished products. NMR spectroscopic method based both on low- (80 MHz) and high- (500-600 MHz) field NMR instrumentation was established, compared and validated for the determination of chondroitin sulfate and glucosamine in dietary supplements. The proposed method was applied for analysis of 20 different dietary supplements. In the majority of cases, quantification results obtained on the low-field NMR spectrometer are similar to those obtained with high-field 500-600 MHz NMR devices. Validation results in terms of accuracy, precision, reproducibility, limit of detection and recovery demonstrated that the developed method is fit for purpose for the marketed products. The NMR method was extended to the analysis of methylsulfonylmethane, adulterant maltodextrin, acetate and inorganic ions. Low-field NMR can be a quicker and cheaper alternative to more expensive high-field NMR measurements for quality control of the investigated dietary supplements. High-field NMR instrumentation can be more favorable for samples with complex composition due to better resolution, simultaneously giving the possibility of analysis of inorganic species such as potassium and chloride.


Subject(s)
Glucosamine , Osteoarthritis , Humans , Reproducibility of Results , Dietary Supplements/analysis , Chondroitin Sulfates/analysis
2.
J Pharm Biomed Anal ; 219: 114915, 2022 Sep 20.
Article in English | MEDLINE | ID: mdl-35777175

ABSTRACT

Nuclear magnetic resonance (NMR) spectrometric methods for the quantitative analysis of pure heparin in crude heparin is proposed. For quantification, a two-step routine was developed using a USP heparin reference sample for calibration and benzoic acid as an internal standard. The method was successfully validated for its accuracy, reproducibility, and precision. The methodology was used to analyze 20 authentic porcine heparinoid samples having heparin content between 4.25 w/w % and 64.4 w/w %. The characterization of crude heparin products was further extended to a simultaneous analysis of these common ions: sodium, calcium, acetate and chloride. A significant, linear dependence was found between anticoagulant activity and assayed heparin content for thirteen heparinoids samples, for which reference data were available. A Diffused-ordered NMR experiment (DOSY) can be used for qualitative analysis of specific glycosaminoglycans (GAGs) in heparinoid matrices and, potentially, for quantitative prediction of molecular weight of GAGs. NMR spectrometry therefore represents a unique analytical method suitable for the simultaneous quantitative control of organic and inorganic composition of crude heparin samples (especially heparin content) as well as an estimation of other physical and quality parameters (molecular weight, animal origin and activity).


Subject(s)
Heparin , Heparinoids , Animals , Glycosaminoglycans , Heparin/analysis , Ions , Magnetic Resonance Spectroscopy/methods , Quality Control , Reproducibility of Results , Swine
3.
Anal Chem ; 94(9): 3997-4004, 2022 03 08.
Article in English | MEDLINE | ID: mdl-35201769

ABSTRACT

Although several successful applications of benchtop nuclear magnetic resonance (NMR) spectroscopy in quantitative mixture analysis exist, the possibility of calibration transfer remains mostly unexplored, especially between high- and low-field NMR. This study investigates for the first time the calibration transfer of partial least squares regressions [weight average molecular weight (Mw) of lignin] between high-field (600 MHz) NMR and benchtop NMR devices (43 and 60 MHz). For the transfer, piecewise direct standardization, calibration transfer based on canonical correlation analysis, and transfer via the extreme learning machine auto-encoder method are employed. Despite the immense resolution difference between high-field and low-field NMR instruments, the results demonstrate that the calibration transfer from high- to low-field is feasible in the case of a physical property, namely, the molecular weight, achieving validation errors close to the original calibration (down to only 1.2 times higher root mean square errors). These results introduce new perspectives for applications of benchtop NMR, in which existing calibrations from expensive high-field instruments can be transferred to cheaper benchtop instruments to economize.


Subject(s)
Lignin , Calibration , Least-Squares Analysis , Magnetic Resonance Spectroscopy , Molecular Weight
4.
J Pharm Biomed Anal ; 212: 114649, 2022 Apr 01.
Article in English | MEDLINE | ID: mdl-35158188

ABSTRACT

Lignin is a promising renewable biopolymer being investigated worldwide as an environmentally benign substitute of fossil-based aromatic compounds, e.g. for the use as an excipient with antioxidant and antimicrobial properties in drug delivery or even as active compound. For its successful implementation into process streams, a quick, easy, and reliable method is needed for its molecular weight determination. Here we present a method using 1H spectra of benchtop as well as conventional NMR systems in combination with multivariate data analysis, to determine lignin's molecular weight (Mw and Mn) and polydispersity index (PDI). A set of 36 organosolv lignin samples (from Miscanthus x giganteus, Paulownia tomentosa and Silphium perfoliatum) was used for the calibration and cross validation, and 17 samples were used as external validation set. Validation errors between 5.6% and 12.9% were achieved for all parameters on all NMR devices (43, 60, 500 and 600 MHz). Surprisingly, no significant difference in the performance of the benchtop and high-field devices was found. This facilitates the application of this method for determining lignin's molecular weight in an industrial environment because of the low maintenance expenditure, small footprint, ruggedness, and low cost of permanent magnet benchtop NMR systems.


Subject(s)
Lignin , Poaceae , Lignin/chemistry , Magnetic Resonance Imaging , Magnetic Resonance Spectroscopy , Molecular Weight , Poaceae/chemistry
5.
J Pharm Biomed Anal ; 209: 114530, 2022 Feb 05.
Article in English | MEDLINE | ID: mdl-34915326

ABSTRACT

NMR standardization approach that uses the 2H integral of deuterated solvent for quantitative multinuclear analysis of pharmaceuticals is described. As a proof of principle, the existing NMR procedure for the analysis of heparin products according to US Pharmacopeia monograph is extended to the determination of Na+ and Cl- content in this matrix. Quantification is performed based on the ratio of a 23Na (35Cl) NMR integral and 2H NMR signal of deuterated solvent, D2O, acquired using the specific spectrometer hardware. As an alternative, the possibility of 133Cs standardization using the addition of Cs2CO3 stock solution is shown. Validation characteristics (linearity, repeatability, sensitivity) are evaluated. A holistic NMR profiling of heparin products can now also be used for the quantitative determination of inorganic compounds in a single analytical run using a single sample. In general, the new standardization methodology provides an appealing alternative for the NMR screening of inorganic and organic components in pharmaceutical products.


Subject(s)
Pharmaceutical Preparations , Magnetic Resonance Spectroscopy , Nuclear Magnetic Resonance, Biomolecular , Reference Standards , Solvents
6.
ACS Omega ; 6(44): 29516-29524, 2021 Nov 09.
Article in English | MEDLINE | ID: mdl-34778623

ABSTRACT

The molecular weight properties of lignins are one of the key elements that need to be analyzed for a successful industrial application of these promising biopolymers. In this study, the use of 1H NMR as well as diffusion-ordered spectroscopy (DOSY NMR), combined with multivariate regression methods, was investigated for the determination of the molecular weight (M w and M n) and the polydispersity of organosolv lignins (n = 53, Miscanthus x giganteus, Paulownia tomentosa, and Silphium perfoliatum). The suitability of the models was demonstrated by cross validation (CV) as well as by an independent validation set of samples from different biomass origins (beech wood and wheat straw). CV errors of ca. 7-9 and 14-16% were achieved for all parameters with the models from the 1H NMR spectra and the DOSY NMR data, respectively. The prediction errors for the validation samples were in a similar range for the partial least squares model from the 1H NMR data and for a multiple linear regression using the DOSY NMR data. The results indicate the usefulness of NMR measurements combined with multivariate regression methods as a potential alternative to more time-consuming methods such as gel permeation chromatography.

7.
Anal Bioanal Chem ; 413(11): 3107-3118, 2021 May.
Article in English | MEDLINE | ID: mdl-33730203

ABSTRACT

Most drugs are no longer produced in their own countries by the pharmaceutical companies, but by contract manufacturers or at manufacturing sites in countries that can produce more cheaply. This not only makes it difficult to trace them back but also leaves room for criminal organizations to fake them unnoticed. For these reasons, it is becoming increasingly difficult to determine the exact origin of drugs. The goal of this work was to investigate how exactly this is possible by using different spectroscopic methods like nuclear magnetic resonance and near- and mid-infrared spectroscopy in combination with multivariate data analysis. As an example, 56 out of 64 different paracetamol preparations, collected from 19 countries around the world, were chosen to investigate whether it is possible to determine the pharmaceutical company, manufacturing site, or country of origin. By means of suitable pre-processing of the spectra and the different information contained in each method, principal component analysis was able to evaluate manufacturing relationships between individual companies and to differentiate between production sites or formulations. Linear discriminant analysis showed different results depending on the spectral method and purpose. For all spectroscopic methods, it was found that the classification of the preparations to their manufacturer achieves better results than the classification to their pharmaceutical company. The best results were obtained with nuclear magnetic resonance and near-infrared data, with 94.6%/99.6% and 98.7/100% of the spectra of the preparations correctly assigned to their pharmaceutical company or manufacturer.


Subject(s)
Acetaminophen/chemistry , Analgesics, Non-Narcotic/chemistry , Spectrum Analysis/methods , Tablets/chemistry , Discriminant Analysis , Multivariate Analysis , Principal Component Analysis
8.
Molecules ; 26(4)2021 Feb 05.
Article in English | MEDLINE | ID: mdl-33562747

ABSTRACT

As a low-input crop, Miscanthus offers numerous advantages that, in addition to agricultural applications, permits its exploitation for energy, fuel, and material production. Depending on the Miscanthus genotype, season, and harvest time as well as plant component (leaf versus stem), correlations between structure and properties of the corresponding isolated lignins differ. Here, a comparative study is presented between lignins isolated from M. x giganteus, M. sinensis, M. robustus and M. nagara using a catalyst-free organosolv pulping process. The lignins from different plant constituents are also compared regarding their similarities and differences regarding monolignol ratio and important linkages. Results showed that the plant genotype has the weakest influence on monolignol content and interunit linkages. In contrast, structural differences are more significant among lignins of different harvest time and/or season. Analyses were performed using fast and simple methods such as nuclear magnetic resonance (NMR) spectroscopy. Data was assigned to four different linkages (A: ß-O-4 linkage, B: phenylcoumaran, C: resinol, D: ß-unsaturated ester). In conclusion, A content is particularly high in leaf-derived lignins at just under 70% and significantly lower in stem and mixture lignins at around 60% and almost 65%. The second most common linkage pattern is D in all isolated lignins, the proportion of which is also strongly dependent on the crop portion. Both stem and mixture lignins, have a relatively high share of approximately 20% or more (maximum is M. sinensis Sin2 with over 30%). In the leaf-derived lignins, the proportions are significantly lower on average. Stem samples should be chosen if the highest possible lignin content is desired, specifically from the M. x giganteus genotype, which revealed lignin contents up to 27%. Due to the better frost resistance and higher stem stability, M. nagara offers some advantages compared to M. x giganteus. Miscanthus crops are shown to be very attractive lignocellulose feedstock (LCF) for second generation biorefineries and lignin generation in Europe.


Subject(s)
Lignin/chemistry , Poaceae/chemistry , Solvents/chemistry
9.
J Pharm Biomed Anal ; 194: 113811, 2021 Feb 05.
Article in English | MEDLINE | ID: mdl-33281004

ABSTRACT

The investigation of the possibility to determine various characteristics of powder heparin (n = 115) was carried out with infrared spectroscopy. The evaluation of heparin samples included several parameters such as purity grade, distributing company, animal source as well as heparin species (i.e. Na-heparin, Ca-heparin, and heparinoids). Multivariate analysis using principal component analysis (PCA), soft independent modelling of class analogy (SIMCA), and partial least squares - discriminant analysis (PLS-DA) were applied for the modelling of spectral data. Different pre-processing methods were applied to IR spectral data; multiplicative scatter correction (MSC) was chosen as the most relevant. Obtained results were confirmed by nuclear magnetic resonance (NMR) spectroscopy. Good predictive ability of this approach demonstrates the potential of IR spectroscopy and chemometrics for screening of heparin quality. This approach, however, is designed as a screening tool and is not considered as a replacement for either of the methods required by USP and FDA.


Subject(s)
Heparin , Animals , Discriminant Analysis , Least-Squares Analysis , Multivariate Analysis , Principal Component Analysis
10.
Talanta ; 222: 121504, 2021 Jan 15.
Article in English | MEDLINE | ID: mdl-33167217

ABSTRACT

Quantitative nuclear magnetic resonance (qNMR) is routinely performed by the internal or external standardization. The manuscript describes a simple alternative to these common workflows by using NMR signal of another active nuclei of calibration compound. For example, for any arbitrary compound quantification by NMR can be based on the use of an indirect concentration referencing that relies on a solvent having both 1H and 2H signals. To perform high-quality quantification, the deuteration level of the utilized deuterated solvent has to be estimated. In this contribution the new method was applied to the determination of deuteration levels in different deuterated solvents (MeOD, ACN, CDCl3, acetone, benzene, DMSO-d6). Isopropanol-d6, which contains a defined number of deuterons and protons, was used for standardization. Validation characteristics (precision, accuracy, robustness) were calculated and the results showed that the method can be used in routine practice. Uncertainty budget was also evaluated. In general, this novel approach, using standardization by 2H integral, benefits from reduced sample preparation steps and uncertainties, and can be applied in different application areas (purity determination, forensics, pharmaceutical analysis, etc.).

11.
Anal Sci ; 36(12): 1467-1471, 2020 Dec 10.
Article in English | MEDLINE | ID: mdl-32801287

ABSTRACT

Heparin is an anticoagulant medication that is usually injected subcutaneously. The quality of a set of commercial heparin injections from different producers was examined by NMR, IR, UV-Vis spectroscopies and potentiometric multisensor system. The type of raw material regarding heparin animal origin and producer, heparin molecular weight and activity values were derived based on the non-targeted analysis of 1H NMR fingerprints. DOSY NMR spectroscopy was additionally used to study homogeneity and additives profile. UV-Vis and IR, being cheaper than NMR, combined with multivariate statistics were successfully applied to study excipients composition as well as semi-estimation of activity values. Potentiometric multisensor measurements were found to be an important additional source of information about inorganic composition of finished heparin formulations. All investigated instrumental techniques are useful for finished heparin injections and should be selected according to availability as well as the information and confidence required for a specific sample.


Subject(s)
Heparin/administration & dosage , Drug Compounding , Heparin/chemistry , Injections , Quality Control
12.
J Pharm Biomed Anal ; 188: 113457, 2020 Sep 05.
Article in English | MEDLINE | ID: mdl-32663766

ABSTRACT

Fast and inexpensive analytical tools for identification of the origin of pharmaceutical formulations are important to ensure consumers safety. This study explores the potential of potentiometric multisensor systems ("electronic tongues") in this type of application. 72 paracetamol samples purchased in different countries and produced by various companies were studied via infrared spectroscopy (IR), near infrared spectroscopy (NIR), nuclear magnetic resonance spectroscopy (NMR) and multisensor system (ET). A variety of chemometric tools was applied to explore and compare the information yielded by these methods. It was found that ET is capable of distinguishing paracetamol formulations from different producers. The chemical information derived from potentiometric sensor responses has something in common with that derived from NIR and IR; however, it is orthogonal to that from NMR. ET can be a valuable tool in express quality assessment of drugs.


Subject(s)
Acetaminophen , Electronic Nose , Drug Compounding , Potentiometry , Spectroscopy, Near-Infrared , Tongue
13.
Biomacromolecules ; 21(5): 1929-1942, 2020 05 11.
Article in English | MEDLINE | ID: mdl-32186856

ABSTRACT

A catalyst-free organosolv pulping process was applied to cup plant (Silphium perfoliatum, S), Miscanthus grass (Miscanthus x giganteus, M), and the Paulownia tree (Paulownia tomentosa, P), resulting in high-purity lignins with no signals for cellulose, hemicellulose, or other impurities in two-dimensional heteronuclear single quantum coherence (HSQC) nuclear magnetic resonance (NMR) spectra. Different biomass particle sizes used for the organosolv pulping (1.6-2.0 mm (1); 0.5-1.0 mm (2); <0.25 mm (3)) influenced the molecular weight and chemical structure of the isolated lignins. Principal component analysis (PCA) of 1H NMR data revealed a high intergroup variance of Miscanthus and Paulownia lignins, separating the small particle fraction from the larger ones. Furthermore, monolignol ratios identified via HSQC NMR differ significantly: Miscanthus lignins were composed of all three monolignols (guaiacyl (G), p-hydroxyphenyl (H), syringyl (S)), while for Paulownia and Silphium lignins only G and S units were observed (except for P3).


Subject(s)
Lignin , Poaceae , Biomass , Cellulose , Spectroscopy, Fourier Transform Infrared
14.
RSC Adv ; 10(18): 10740-10751, 2020 Mar 11.
Article in English | MEDLINE | ID: mdl-35492943

ABSTRACT

Miscanthus crops possess very attractive properties such as high photosynthesis yield and carbon fixation rate. Because of these properties, it is currently considered for use in second-generation biorefineries. Here we analyze the differences in chemical composition between M. x giganteus, a commonly studied Miscanthus genotype, and M. nagara, which is relatively understudied but has useful properties such as increased frost resistance and higher stem stability. Samples of M. x giganteus (Gig35) and M. nagara (NagG10) have been separated by plant portion (leaves and stems) in order to isolate the corresponding lignins. The organosolv process was used for biomass pulping (80% ethanol solution, 170 °C, 15 bar). Biomass composition and lignin structure analysis were performed using composition analysis, Fourier-transform infrared (FTIR), ultraviolet-visible (UV-Vis) and nuclear magnetic resonance (NMR) spectroscopy, thermogravimetric analysis (TGA), size exclusion chromatography (SEC) and pyrolysis gas-chromatography/mass spectrometry (Py-GC/MS) to determine the 3D structure of the isolated lignins, monolignol ratio and most abundant linkages depending on genotype and harvesting season. SEC data showed significant differences in the molecular weight and polydispersity indices for stem versus leaf-derived lignins. Py-GC/MS and hetero-nuclear single quantum correlation (HSQC) NMR revealed different monolignol compositions for the two genotypes (Gig35, NagG10). The monolignol ratio is slightly influenced by the time of harvest: stem-derived lignins of M. nagara showed increasing H and decreasing G unit content over the studied harvesting period (December-April).

15.
J Pharm Biomed Anal ; 177: 112847, 2020 Jan 05.
Article in English | MEDLINE | ID: mdl-31505431

ABSTRACT

The quantification of a drug, its impurities, and e.g. components of a mixture has become routine in NMR laboratories and many applications have been described in the literature. However, besides simply using 1D 1H or 13C NMR, a number of more advanced methods has been developed and used in the past. Here, we want to describe the applicability of nuclei beyond the classical ones 1H and 13C. Mixtures can be characterized much better by applying various chemometric methods and separating the signals of mixture components can be achieved by DOSY experiments. All these methods contribute to the platform of qNMR methods and extend the possibilities of NMR for quantification and quality evaluation of drugs, excipients, polymers, and plant extracts. However, for quantification purposes, validation is always an issue and it is necessary to think about taking NMR related measures which might be different from the ones considered for chromatographic methods.


Subject(s)
Chemistry, Pharmaceutical/methods , Magnetic Resonance Spectroscopy/methods , Quality Control , Chemistry, Pharmaceutical/history , Chemistry, Pharmaceutical/statistics & numerical data , Excipients/analysis , Excipients/chemistry , History, 20th Century , History, 21st Century , Magnetic Resonance Spectroscopy/history , Plant Extracts/analysis , Plant Extracts/chemistry , Polymers/analysis , Polymers/chemistry , Publications/history , Publications/statistics & numerical data
16.
Talanta ; 208: 120451, 2020 Feb 01.
Article in English | MEDLINE | ID: mdl-31816793

ABSTRACT

Independent components analysis (ICA) is a probabilistic method, whose goal is to extract underlying component signals, that are maximally independent and non-Gaussian, from mixed observed signals. Since the data acquired in many applications in analytical chemistry are mixtures of component signals, such a method is of great interest. In this article recent ICA applications for quantitative and qualitative analysis in analytical chemistry are reviewed. The following experimental techniques are covered: fluorescence, UV-VIS, NMR, vibrational spectroscopies as well as chromatographic profiles. Furthermore, we reviewed ICA as a preprocessing tool as well as existing hybrid ICA-based multivariate approaches. Finally, further research directions are proposed. Our review shows that ICA is starting to play an important role in analytical chemistry, and this will definitely increase in the future.

17.
Anal Bioanal Chem ; 411(27): 7055-7059, 2019 Nov.
Article in English | MEDLINE | ID: mdl-31598742

ABSTRACT

A new perspective on the relevant problem-creating simple, rapid, and efficient protein sensors based on microstructured optical fibers using a simple homogeneous analysis format-was proposed. Commercially available long-period grating hollow core microstructured optical fibers (LPG HCMOF) were used to determine bovine serum albumin (BSA) and albumin from chicken eggs (OVA) in binary mixtures as well as immunoglobulin G (IgG) in the presence of BSA and OVA. LPG HCMOF transmission spectra allowed the detection of both BSA and OVA up to 10 mg/mL with LOD as low as 0.1 and 0.8 µg/mL, respectively. Partial least squares regression (PLS) was utilized for modeling of LPG HCMOF spectral data and quantitative analysis of BSA, OVA, total protein, and IgG in binary and ternary mixtures. Rather high coefficients of determination (R2) and low root mean square error for the calibration (RMSEC) (15%) and prediction (RMSEP) (20%) were obtained for all PLS models. The proposed approach was tested in the analysis of BSA in spiked horse blood hemolyzed (HBH). The results demonstrated the functionality of the proposed approach and offered the opportunity for the creation of a wide range of sensors for protein determination in complex mixtures. Graphical abstract.


Subject(s)
Immunoglobulin G/analysis , Ovalbumin/analysis , Serum Albumin, Bovine/analysis , Animals , Blood Chemical Analysis/methods , Cattle , Chickens , Horses , Least-Squares Analysis , Mice , Models, Molecular , Optical Fibers
18.
J Pharm Biomed Anal ; 174: 639-643, 2019 Sep 10.
Article in English | MEDLINE | ID: mdl-31279893

ABSTRACT

Heparin is a carbohydrate polymer, which is clinically used as an anticoagulant for the treatment of thrombotic disorders. The anticoagulant process is mainly mediated by the interaction of heparin with antithrombin followed by inhibition of clotting factors IIa (FIIa) and Xa (FXa). The influence of polymer disaccharide structure, average molecular weight and impurity profiling (e.g., chloride and water content) was investigated by NMR spectrometry and principal component analysis (PCA) for a representative dataset of porcine heparin samples (n = 509). A significant linear dependence was found between anticoagulant activity and scores on the third principal component (PC3) based on the non-targeted analysis of 1H NMR fingerprints. The correlation between average molecular values and anticoagulant activity for the 24 porcine heparin samples from two manufacturers was linear (R = 0.85) over typical values for porcine heparin preparations. Chloride and water contents were identified as negatively influencing factors for the actual activity values as their presence decrease the "pharmaceutically active" organic part of heparin preparations. Some suggestions regarding manufacturing process are made according to the results.


Subject(s)
Anticoagulants/analysis , Heparin/analysis , Magnetic Resonance Spectroscopy , Animals , Anticoagulants/chemistry , Chlorides/chemistry , Disaccharides/chemistry , Factor Xa/chemistry , Factor Xa Inhibitors/analysis , Factor Xa Inhibitors/chemistry , Heparin/chemistry , Heparin, Low-Molecular-Weight/analysis , Linear Models , Molecular Weight , Polymers/chemistry , Principal Component Analysis , Prothrombin/chemistry , Swine , Water/chemistry
19.
J Pharm Biomed Anal ; 173: 18-23, 2019 Sep 05.
Article in English | MEDLINE | ID: mdl-31108420

ABSTRACT

NMR spectroscopy has become an essential diagnostic tool for pharmaceutical preparations worldwide, with many runs performed annually on a routine basis. In this study multivariate analysis was performed on a big dataset of 990 NMR heparin spectra recorded over six years (2012-2017) in our laboratory. Several steps of statistical analysis of accumulated data were used to differentiate samples according to animal origin (bovine, porcine and ovine heparin), purity grade (crude and purified heparin), distributing company as well as to estimate their closeness to the heparin reference sample (SST) provided by US Pharmacopeia. The projection of new samples on these models can automatically forecast of all mentioned qualitative heparin properties within one minute. NMR data of heparin pharmaceutical preparations provided a good opportunity to demonstrate the potential of exploratory data analysis considering the same sample preparation and acquisition parameters were used.


Subject(s)
Anticoagulants/analysis , Heparin/analysis , Proton Magnetic Resonance Spectroscopy , Quality Control , Animals , Cattle , Drug Contamination/prevention & control , Multivariate Analysis , Principal Component Analysis , Retrospective Studies , Sheep , Swine
20.
PLoS One ; 14(4): e0210374, 2019.
Article in English | MEDLINE | ID: mdl-30933980

ABSTRACT

Fragmentation of DNA is the very important first step in preparing nucleic acids for next-generation sequencing. Here we report a novel Fragmentation Through Polymerization (FTP) technique, which is a simple, robust, and low-cost enzymatic method of fragmentation. This method generates double-stranded DNA fragments that are suitable for direct use in NGS library construction and allows the elimination of the additional step of reparation of DNA ends.


Subject(s)
DNA Fragmentation , DNA/chemistry , High-Throughput Nucleotide Sequencing/methods , Polymerization , Sequence Analysis, DNA/methods , Computational Biology , DNA/genetics , Deoxyribonuclease I/chemistry , Gene Library
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