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1.
Neotrop Entomol ; 41(1): 46-56, 2012 Feb.
Article in English | MEDLINE | ID: mdl-23950009

ABSTRACT

In Colombia, like most Neotropical countries, faunistic studies on flower flies have been occasional and most of them have been primarily focused on taxonomy. Colombia is the second-most species-rich country in flower fly diversity in the Neotropics after Brazil, and has one of the highest numbers of species per unit area (2.49 per 10,000 km²), based on a review of literature and national collections. Including new data presented here, a total of 47 genera and 300 species are recorded in Colombia. The genera Scaeva Fabricius and Lycastrirhyncha Bigot, as well as 101 species are recorded here for the first time. The altitudinal range and the distribution of the flower fly genera in Colombia are presented. A preliminary comparison of the fauna of Colombia with that of other Neotropical countries is given. A historical perspective is also provided in order to illustrate how Colombian Syrphidae knowledge has progressed over the last 168 years. Information presented here will be useful for ongoing and future biodiversity research as well as conservation projects on Syrphidae in the Neotropical region.


Subject(s)
Diptera , Animals , Colombia , Demography , Flowers
2.
Water Sci Technol ; 57(9): 1445-50, 2008.
Article in English | MEDLINE | ID: mdl-18496011

ABSTRACT

The effect of the use of treated wastewater on the growth of cabernet sauvignon and merlot grapes from the Guadalupe Valley, Mexico was evaluated. Secondary advanced effluent was used to irrigate the grapevines at a rate of 66 L/vine/week. Wastewater quality results confirmed that all parameters complied with Mexican legislation for crop irrigation as well as reuse in activities in which the public would be in direct or indirect contact with the reclaimed water. Results showed that the number of leaves per shoot and the overall biomass increased in plants irrigated with wastewater and grape production per plant was 20% higher. The concentration of carbohydrates, organic acids and pH were similar in grapes from vines irrigated with wastewater to those irrigated with groundwater. Throughout the experiment, no fecal coliform bacteria were detected in the cultivated grapes. The wastewater caused an increase in the biomass of the grapevines and there was no presence of microbial indicators in the final product so a higher wine production could be achieved without an increase in health risk related problems. If 200 L/s of reclaimed wastewater would be returned to be used for grapevine irrigation in Valle de Guadalupe (the same amount that is currently being sent as drinking water to Ensenada), assuming an irrigation application of 6,000-7.500 m3/ha/year, approximately 837-1046 hectares (ha) of grapevines could be irrigated. Part of ongoing research includes an economical analysis of the best options for Ensenada and the Valle de Guadalupe in order to establish the optimum volume of water to be returned, the cost of its transportation, as well as the cost of irrigation.


Subject(s)
Conservation of Natural Resources/methods , Vitis/drug effects , Water Pollutants, Chemical/toxicity , Agriculture/methods , Ammonia/analysis , Biomass , Carbohydrates/analysis , Geography , Mexico , Nitrates/analysis , Phosphates/analysis , Plant Leaves/drug effects , Plant Leaves/growth & development , Plant Leaves/metabolism , Plant Shoots/drug effects , Plant Shoots/growth & development , Plant Shoots/metabolism , Seasons , Vitis/growth & development , Vitis/metabolism , Waste Disposal, Fluid/methods
3.
Mol Gen Genet ; 233(3): 427-35, 1992 Jun.
Article in English | MEDLINE | ID: mdl-1620098

ABSTRACT

We have selected a tobacco cell line, SU-27D5, that is highly resistant to sulfonylurea and imidazolinone herbicides. This line was developed by selection first on a lethal concentration of cinosulfuron and then on increasing concentrations of primisulfuron, both sulfonylurea herbicides. SU-27D5 was tested against five sulfonylureas and one imidazolinone herbicide and was shown, in every case, to be two to three orders of magnitude more resistant than wild-type cells. The acetohydroxyacid synthase (AHAS) of SU-27D5 was 50- to 780-fold less sensitive than that of wild-type cells to herbicide inhibition. The specific activity of AHAS in the SU-27D5 cell lysate was 6 to 7 times greater than that in wild-type cells. Using Southern analysis, we showed that cell line SU-27D5 had amplified its SuRB AHAS gene about 20-fold while maintaining a normal diploid complement of the SuRA AHAS gene. Genomic clones of both AHAS genes were isolated and used to transform wild-type tobacco protoplasts. SuRB clones gave rise to herbicide-resistant transformants, whereas SuRA clones did not. DNA sequencing showed that all SuRB clones contained a point mutation at nucleotide 588 that converted amino acid 196 of AHAS from proline to serine. In contrast, no mutations were found in the SuRA clones. The stability of SuRB gene amplification was variable in the absence of selection. In one experiment, the withdrawal of selection reduced the copy number of the amplified SuRB gene to the normal level within 30 days. In another experiment, amplification remained stable after extended cultivation on herbicide-free medium.(ABSTRACT TRUNCATED AT 250 WORDS)


Subject(s)
Acetolactate Synthase/genetics , Gene Amplification/genetics , Herbicides/pharmacology , Nicotiana/enzymology , Plants, Toxic , Sulfonylurea Compounds , Blotting, Southern , Cell Line , Cloning, Molecular , Drug Resistance/genetics , Multigene Family/genetics , Mutation/genetics , Nicotiana/drug effects , Nicotiana/genetics
4.
Proc Natl Acad Sci U S A ; 88(17): 7763-7, 1991 Sep 01.
Article in English | MEDLINE | ID: mdl-1909028

ABSTRACT

This paper presents the map and DNA sequence analysis of pRi8196 transferred DNA (T-DNA) genes encoding root-inducing and mannopine synthesis functions. A canonical 24-base-pair border repeat as well as two "pseudoborders" are present at the functional right T-DNA border. To the left of this border are homologs of the mas1' and mas2' genes of TR pRiA4. Next to these are five open reading frames (ORFs) homologous to ORFs 10-14 of TL of pRiA4. ORFs 10-12 (rolA, rolB, and rolC) are less related to their pRiA4 homologs than are the other large ORFs analyzed here. In contrast to T-DNA genes of pRiA4, pRi8196 T-DNA ORFs 11 and 12 (rolB and rolC) are sufficient to induce hairy roots on carrot disks.


Subject(s)
DNA, Bacterial/genetics , Genes, Bacterial , Mannitol/analogs & derivatives , Plasmids , Rhizobium/genetics , Base Sequence , Cloning, Molecular , Mannitol/metabolism , Molecular Sequence Data , Open Reading Frames , Plants/microbiology , Restriction Mapping , Rhizobium/metabolism , Rhizobium/physiology
5.
Theor Appl Genet ; 80(3): 353-8, 1990 Sep.
Article in English | MEDLINE | ID: mdl-24220969

ABSTRACT

Inbred lines of corn (Zea mays L.) have been characterized, which exhibit differential sensitivity to the sulfonylurea herbicide primisulfuron (2-[3-(4,6-bis(di-fluoromethoxy) pyrimidin-2-yl)-ureidosulfonyl]-benzoic acid methylester). When treated postemergence with 160 g a.i. per hectare, inbred 4CO exhibited complete tolerance while inbred 4N5 was killed. The F1 hybrid 4C0 x 4N5 was uniformly tolerant indicating dominance of the tolerance trait. The field observations correlated with laboratory tests in which seedling root growth was measured. Based on IC50, inbred 4CO was more than ten times more tolerant than inbred 4N5. In the F2 and F3 generations, a 3∶1 segregation of tolerant and sensitive individuals was observed, consistent with tolerance being inherited as a single dominant trait. Backcrosses of heterozygous F1 plants with the sensitive parent (4N5) yielded progeny that segreated at the expected 1∶1 ratio. Backcrosses with 4C0 yielded tolerant offspring only. Inhibition characteristics of acetohydroxyacid synthase (AHAS; E.C. 4.1.3.18) were determined. The enzymes from both inbreds and their F1 hybrid were equally sensitive and strongly inhibited by primisulfuron (IC50: 7 nM). The fate of (14)C-labeled primisulfuron in seedling tissues of inbred 4C0 and the hybrid, 4C0 x 4N5, indicated rapid metabolism with a half-life (t 1/2) of approximately 3 h. On the other hand, the herbicide-sensitive inbred 4N5 was considerably slower to metabolize primisulfuron (t 1/2 >24 h). These data indicate that differential metabolism is the mechanism of tolerance to the sulfonylurea herbicide primisulfuron in tolerant corn.

6.
J Bacteriol ; 167(1): 387-8, 1986 Jul.
Article in English | MEDLINE | ID: mdl-3722126

ABSTRACT

Agrobacterium-infected carrot disks continually produced elevated levels of ethylene. Ethylene production was mediated by the elevated levels of auxin synthesized in transformed tissues.


Subject(s)
Ethylenes/biosynthesis , Plant Tumors/microbiology , Plants/microbiology , Plasmids , Rhizobium/genetics , Indoleacetic Acids/biosynthesis , Plants/metabolism
7.
Cell ; 29(3): 1005-14, 1982 Jul.
Article in English | MEDLINE | ID: mdl-7151163

ABSTRACT

The A6S/2 tumor incited on tobacco by Agrobacterium tumefaciens harboring the octopine-type A6 Ti plasmid contains one insert of Ti-plasmid sequences (the T DNA). This 13 kb insert is derived from a colinear sequence in the Ti plasmid (the T region) and becomes attached to plant DNA in the nucleus of the host cell. We have determined the DNA sequence encompassing the left end of the T region of the A6 Ti plasmid and the corresponding portion of the A6S/2 T DNA. The two sequences are identical for at least 806 bp. To the left of the divergence point, the tumor contains five partially overlapping sequences that are direct or inverted repeats of sequences to the right of the divergence point. The Ti plasmid contains only the right member of each of these repeats. We have also performed heteroduplex studies that indicate that this T DNA has a 520 bp inverted repeat of an internal sequence at the right end near its junction with plant DNA. The repeated sequences near the ends of the T DNA resemble the repeats of adenovirus type 12 sequences found near its junction with host DNA. We discuss data suggesting that the 23 bp to the immediate right of the divergence point of the A6 left junction form a site important in some step in the transfer of T-region DNA from the bacteria to the plant.


Subject(s)
Plant Tumors/genetics , Plasmids , Rhizobium/genetics , Base Sequence , Gene Expression Regulation , Genetic Linkage , Repetitive Sequences, Nucleic Acid
8.
Cell ; 19(3): 729-39, 1980 Mar.
Article in English | MEDLINE | ID: mdl-7363328

ABSTRACT

The Ti plasmid sequences (T DNA) maintained in four unorganized crown gall tumor lines were defined by using restriction endonucleases and molecular hybridization techniques. Each tumor line contains a "core" T DNA which is apparently responsible for maintaining the transformed state; the core T DNA is colinear with the Ti plasmid and contains the Ti plasmid sequences referred to as the "common DNA"--sequences found in all Ti plasmids studied to date. A given Ti plasmid does not always give rise to the same T DNA complement. The data suggest that the majority if not all of the T DNA is integrated into plant DNA, that preferred regions of the Ti plasmid serve as the points of attachment to plant DNA and that the T DNA can be linked to more than one site in the plant genome.


Subject(s)
DNA/genetics , Plant Tumors , Plasmids , Recombination, Genetic , Rhizobium/genetics , Base Sequence , DNA, Bacterial/genetics , Nucleic Acid Hybridization , Plant Tumors/microbiology
10.
Mol Gen Genet ; 177(4): 637-43, 1980.
Article in English | MEDLINE | ID: mdl-6247611

ABSTRACT

The Ti plasmid DNA maintained in octopine-type crown gall tumor lines is variable, but always includes at least part of the Ti plasmid that maps over the region of Hind III fragment 1 of pTiB6-806. The right-hand boundary of transferred DNA (T-DNA) varies considerably among the three independent tumor lines examined; the left boundary was not located definitively. The T-DNA of two sibling clones of the same tumor line, E1 and E9, appears identical. The copy number of T-DNA in E9 tumor DNA appears higher for the right end (about 30 copies) than for the left end (approximately 1 copy).


Subject(s)
DNA, Bacterial/genetics , DNA, Neoplasm/genetics , Plasmids , Rhizobium/genetics , Cell Line , Chromosome Mapping , DNA Replication , DNA Restriction Enzymes/metabolism , Neoplasms
11.
In Vitro ; 16(1): 87-92, 1980 Jan.
Article in English | MEDLINE | ID: mdl-7364453

ABSTRACT

Transformation of plant tissues into crown gall tumors has been associated with the transfer of a portion of a tumor-inducing plasmid (Ti-plasmid) into plant DNA. Various laboratories have regenerated normal-appearing plants from a number of crown gall tumors. This study investigates the fate of the foreign DNA in a series of tissues derived from various parts of a plant regenerated from the tumor BT-37 by Braum and his coworkers. It was found that all the foreign DNA sequences were lost from tissues that had lost all their tumorous traits; whereas the plasmid DNA sequences were still present in tissues that appeared normal but still exhibited tumorous traits when returned to tissue culture media. From these studies it would appear that the presence of the Ti-plasmid sequences in the plant DNA is required for the maintenance of the transformed state.


Subject(s)
DNA, Neoplasm/genetics , Plant Tumors/etiology , DNA/genetics , Plasmids
12.
J Bacteriol ; 136(3): 909-15, 1978 Dec.
Article in English | MEDLINE | ID: mdl-721779

ABSTRACT

Most biotype 2 strains of Agrobacterium tumefaciens and A. radiobacter which utilize nopaline also degrade octopine. In all such strains studied, the ability to degrade octopine did not appear to be transferred to plasmidless recipient cells under conditions of plasmid transfer in which the ability to utilize nopaline was transferred. An octopine-degrading mutant was isolated in a strain cured of its plasmid, suggesting that genes of octopine degradation may have a chromosomal location in some strains. In strains in which octopine utilization is coded by plasmid genes, octopine degradation was always inducible, whereas in strains which degrade both octopine and nopaline, octopine utilization was constitutive although nopaline degradation was inducible. When plasmids coding for octopine-utilizing ability were transformed into a strain containing either a nopaline- or null-type plasmid, transformants able to degrade octopine were either not observed or were unstable upon purification. All of these data suggest that plasmids associated with virulence are incompatible with one another, and therefore imply that the major groups of plasmids associated with virulence have a common origin.


Subject(s)
Genes , Plasmids , Rhizobium/genetics , Arginine/analogs & derivatives , Arginine/metabolism , Chromosomes, Bacterial , Glutarates/metabolism , Mutation , Rhizobium/metabolism
16.
J Bacteriol ; 129(1): 101-7, 1977 Jan.
Article in English | MEDLINE | ID: mdl-830636

ABSTRACT

Crown gall tumors produced octopine or nopaline or neither compound, depending on the bacterial strain that incited the tumor. The genes specifying production of octopine or nopaline by the tumor were transferred to recipient bacterial strains when the large plasmid associated with virulence was transferred by either conjugation or deoxyribonucleic acid-mediated transformation. Our results, which confirm the work of others (Bomhoff et al., 1976; Goldman et al., 1968; Petit et al., 1970), indicate that, in general, the strains that utilize octopine induce tumors that synthesize octopine, and those that utilize nopaline induce tumors that synthesize nopaline. However, there were several notable exceptions. One class utilized both octopine and nopaline, but the tumors induced by these strains produced only nopaline. Another class utilized nopaline, but their tumors synthesized neither nopaline nor octopine. Mutants were isolated from a number of either octopine- or nopaline-utilizing strains that no longer could utilize the relevant guanido amino acid. These strains, which were mutant in the gene specifying octopine or nopaline oxidase, still retained the permease for these amino acids as well as virulence. Tumors induced by these mutants still synthesized approximately the same levels of octopine and nopaline as tumors induced by their parents. These results suggest that the plasmid gene that determines production of octopine or nopaline by the tumor is distinct from the plasmid gene that determines their catabolism by the bacteria.


Subject(s)
Arginine/analogs & derivatives , Extrachromosomal Inheritance , Genes , Plant Tumors , Plasmids , Rhizobium/metabolism , Arginine/biosynthesis , Arginine/metabolism , Conjugation, Genetic , Glutarates/metabolism , Oxidoreductases Acting on CH-NH Group Donors/metabolism , Rhizobium/pathogenicity , Transformation, Genetic
18.
J Bacteriol ; 126(2): 699-705, 1976 May.
Article in English | MEDLINE | ID: mdl-4431

ABSTRACT

Two transaminases exist for tyrosine and phenylalanine synthesis in Bacillus subtilis. One enzyme is also responsible for the transamination of imidazole acetol phosphate to histidinol phosphate, an obligatory reaction in the synthesis of histidine. The gene involved in the synthesis of this enzyme lies in the middle of a cluster of genes, all of which are concerned with the synthesis of the aromatic amino acids. The other gene has not yet been mapped. Mutants have been isolated that lack one or the other enzyme activity. These mutants are prototrophic for tyrosine and phenylalanine. However, both classes of mutants are more sensitive than the wild-type strain to the phenylalanine analogue, fluorophenylalanine, suggesting that each of these mutants synthesizes less phenylalanine than does the wild-type strain. The two enzymes can be separated from one another by ion-exchange chromatography and glycerol-gradient centrifugation. The significance of the observation that an enzyme of histidine synthesis also plays a role in the synthesis of the aromatic acids is considered in light of cross-pathways regulation between the two pathways.


Subject(s)
Bacillus subtilis/enzymology , Histidine/biosynthesis , Phenylalanine/biosynthesis , Transaminases , Tyrosine/biosynthesis , Bacillus subtilis/metabolism , Cell-Free System , Genes , Mutation , Transaminases/metabolism , Tyrosine Transaminase/metabolism , p-Fluorophenylalanine/pharmacology
19.
J Biol Chem ; 250(19): 7675-81, 1975 Oct 10.
Article in English | MEDLINE | ID: mdl-170268

ABSTRACT

In Bacillus subtilis shikimate kinase enzyme activity can be demonstrated when a small polypeptide forms a trifunctional complex with the bifunctional enzyme 3-deoxy-D-arabinoheptulosonate-7-phosphate synthetase-chorismate mutase. The shikimate kinase polypeptide whoch carries the catalytic site has been purified to homogeneity by a five-step procedure. The skikimate kinase was determined to have a molecular weight of 10,000 by superfine Sephadex G-75 thin layer chromatography and by calculation of the minimum chemical molecular weight from its amino acid composition. This number corresponds closely to the molecular weight determined by the mobility of the protein following electrophoresis on polyacrylamide gels containing sodium dodecyl sulfate. The enzyme aggregates with itself forming larger molecular weight proteins. Thes aggregational pattersn depend on protein concentration and sulfhydryl bridges. The enzyme activity is completely inhibited by EDTA and the requirement for Mg2+ can be partially replaced by Mn2+, Ca2+, and Co2+. The inhibition of shikimate kinase activity by p-hydroxymercuribenzoate is reversed completely when the enzyme complex is treated with dithiothreitol, suggesting the sulfhydryl groups may be involved with the active site. The trifunctional complex is relatively unstable, and the nonidentical subunits dissociate readily. This dissociation results in a 99% loss in shikimate kinase activity and a 30% decrease in the chorismate mutase-DAHP synthetase activities. Shikimate kinase activity is subject to a variety of controls. It is inhibited by the allosteric effectors chorismate and prephenate, the products of the reaction, ADP, and shikimate 5-phosphate. The activity responds to changes in the energy charge of the cell. Because of the variety of controls exerted on this enzyme, this member of the regulatory complex may represent the key enzyme in the allosteric control of the synthesis of the common precursors of aromatic acid synthesis.


Subject(s)
Bacillus subtilis/enzymology , Phosphotransferases/metabolism , Adenosine Diphosphate/pharmacology , Amino Acids/analysis , Cations, Divalent , Energy Transfer , Kinetics , Molecular Weight , Organophosphorus Compounds/pharmacology , Peptides/pharmacology , Phosphotransferases/isolation & purification , Phosphotransferases (Alcohol Group Acceptor) , Shikimic Acid/pharmacology , Thermodynamics
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