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1.
Am J Gastroenterol ; 96(6): 1786-90, 2001 Jun.
Article in English | MEDLINE | ID: mdl-11419830

ABSTRACT

OBJECTIVE: The growing use and complexity of endoscopy procedures in GI units has increased the need for good patient preparation. Earlier studies in this area have focused on the psychological benefits of patient education programs. The present study was directed at determining cost-effectiveness of a patient education program. METHODS: A prospective, randomized, controlled design was used. The patient population consisted of 142 patients aged 18-90 yr referred for an endoscopy procedure. Ninety-one (64%) participated in a targeted educational session conducted by a dedicated departmental nurse (group 1), 38 (27%) did not (group 2), and 13 (9%) received telephonic instruction (group 3). Before the endoscopy, all patients completed a questionnaire covering background data, endoscopy-related variables, anxiety level, and satisfaction. Patient cooperation and success/failure of the procedure were documented by the attending nurse. RESULTS: Male gender, previous endoscopy, and explanation from the referring physician were associated with a low level of anxiety (p < 0.05). There was a significant association between attendance in the education program and success of the endoscopy (p = 0.0009). Cancellations of procedures because of poor preparation occurred in 4.39% of group 1 in comparison with 26.31% and 15.38% of groups 2 and 3, respectively (p = 0.005). The overall cost of the procedure was reduced by 8.6%, 8.9%, and 5.5% for gastroscopy, colonoscopy, and sigmoidoscopy, respectively. All participants expressed satisfaction with the brochure. CONCLUSION: A pre-endoscopy patient education program apparently increase patient compliance, thereby decreasing both the need for repeated examinations and their attendant costs.


Subject(s)
Endoscopy, Gastrointestinal/economics , Patient Compliance , Patient Education as Topic , Adolescent , Adult , Aged , Colonoscopy/economics , Cost-Benefit Analysis , Female , Gastroscopy/economics , Humans , Male , Middle Aged , Prospective Studies , Random Allocation , Sigmoidoscopy/economics
2.
J Mol Biol ; 287(3): 499-510, 1999 Apr 02.
Article in English | MEDLINE | ID: mdl-10092455

ABSTRACT

The tRNALys-specific anticodon nuclease exists in latent form in Escherichia coli strains containing the optional prr locus. The latency is a result of a masking interaction between the anticodon nuclease core-polypeptide PrrC and the Type IC DNA restriction-modification enzyme EcoprrI. Activation of the latent enzyme by phage T4-infection elicits cleavage of tRNALys 5' to the wobble base, yielding 5'-OH and 2', 3'-cyclic phosphate termini. The N-proximal half of PrrC has been implicated with (A/G) TPase and EcoprrI interfacing activities. Therefore, residues involved in recognition and cleavage of tRNALys were searched for at the C-half. Random mutagenesis of the low-G+C portion encoding PrrC residues 200-313 was performed, followed by selection for loss of anticodon nuclease-dependent lethality and production of full-sized PrrC-like protein. This process yielded a cluster of missense mutations mapping to a region highly conserved between PrrC and two putative Neisseria meningitidis MC58 homologues. This cluster included two adjacent members that relaxed the inherent enzyme's cleavage specificity. We also describe another mode of relaxed specificity, due to mere overexpression of PrrC. This mode was shared by wild-type PrrC and the other mutant alleles. The additional substrates recognised under the promiscuous conditions had, in general, anticodons resembling that of tRNALys. Taken together, the data suggest that the anticodon of tRNALys harbours anticodon nuclease identity elements and implicates a conserved region in PrrC in their recognition.


Subject(s)
Escherichia coli Proteins , RNA, Transfer, Lys/metabolism , Ribonucleases/metabolism , Amino Acid Sequence , Bacterial Proteins/chemistry , Bacterial Proteins/genetics , Bacterial Proteins/metabolism , Base Sequence , Binding Sites/genetics , Conserved Sequence , DNA Primers/genetics , Enzyme Activation , Escherichia coli/enzymology , Escherichia coli/genetics , Gene Expression , Genes, Bacterial , Molecular Sequence Data , Mutation, Missense , Phenotype , Ribonucleases/chemistry , Ribonucleases/genetics , Sequence Homology, Amino Acid , Substrate Specificity
3.
J Mol Biol ; 249(5): 857-68, 1995 Jun 23.
Article in English | MEDLINE | ID: mdl-7791212

ABSTRACT

The optional Escherichia coli prr locus encodes two physically associated restriction systems: the type IC DNA restriction-modification enzyme EcoprrI and the tRNA(Lys)-specific anticodon nuclease, specified by the PrrC polypeptide. Anticodon nuclease is kept latent as a result of this interaction. The activation of anticodon nuclease, upon infection by phage T4, may cause depletion of tRNA(Lys) and, consequently, abolition of T4 protein synthesis. However, this effect is counteracted by the repair of tRNA(Lys) in consecutive reactions catalysed by the phage enzymes polynucleotide kinase and RNA ligase. Stp, a short polypeptide encoded by phage T4, has been implicated with activation of the anticodon nuclease. Here we confirm this notion and also demonstrate a second function of Stp: inhibition of EcoprrI restriction. Both effects depend, in general, on the same residues within the N-proximal 18 residue region of Stp. We propose that Stp alters the conformation of EcoprrI and, consequently, of PrrC, allowing activation of the latent anticodon nuclease. Presumably, Stp evolved to offset a DNA restriction system of the host cell but was turned, eventually, against the phage as an activator of the appended tRNA restriction enzyme.


Subject(s)
Bacteriophage T4/genetics , Deoxyribonucleases, Type I Site-Specific/metabolism , Escherichia coli Proteins , Escherichia coli/genetics , Gene Expression Regulation, Bacterial , Gene Expression Regulation, Viral , RNA, Transfer, Lys/metabolism , Ribonucleases/genetics , Site-Specific DNA-Methyltransferase (Adenine-Specific)/metabolism , Viral Nonstructural Proteins/genetics , Amino Acid Sequence , Bacterial Proteins , Base Sequence , Enzyme Activation , Molecular Sequence Data , Mutagenesis , Oligodeoxyribonucleotides/chemistry , RNA, Messenger/genetics , Structure-Activity Relationship
4.
Nucleic Acids Res ; 23(10): 1744-9, 1995 May 25.
Article in English | MEDLINE | ID: mdl-7784179

ABSTRACT

Anticodon nuclease is a bacterial restriction enzyme directed against tRNA(Lys). We report that anticodon nuclease also cleaves mammalian tRNA(Lys) molecules, with preference and site specificity shown towards the natural substrate. Expression of the anticodon nuclease core polypeptide PrrC in HeLa cells from a recombinant vaccinia virus elicited cleavage of intracellular tRNA(Lys),3. The data justify an inquiry into the possible application of anticodon nuclease as an inhibitor of tRNA(Lys),3-primed HIV replication. They also indicate that the anticodon region of tRNA(Lys) is a substrate recognition site and suggest that PrrC harbors the enzymatic activity.


Subject(s)
Bacterial Proteins/metabolism , Escherichia coli Proteins , Escherichia coli/metabolism , HIV/genetics , HIV/physiology , RNA, Transfer, Lys/metabolism , Ribonucleases/metabolism , Animals , Bacterial Proteins/biosynthesis , Base Sequence , HeLa Cells , Humans , Mammals , Molecular Sequence Data , Nucleic Acid Conformation , RNA, Transfer, Lys/chemistry , Recombinant Proteins/biosynthesis , Recombinant Proteins/metabolism , Ribonucleases/biosynthesis , Sequence Homology, Nucleic Acid , Substrate Specificity , Transfection
5.
J Biol Chem ; 268(36): 26842-9, 1993 Dec 25.
Article in English | MEDLINE | ID: mdl-8262917

ABSTRACT

Escherichia coli carrying the optional locus prr harbor a latent, tRNA(Lys)-specific anticodon nuclease, activated by the product of phage T4 stp. Anticodon nuclease latency is ascribed to the masking of prrC, implicated with the enzymatic activity, by flanking, type Ic DNA restriction modification genes (prrA, B&D-hsdM, S&R). Overexpression of plasmid-borne prrC elicited anticodon nuclease activity in uninfected E. coli. In vitro, the prr-C-coded core activity was indifferent to a synthetic Stp polypeptide, GTP, ATP, and endogenous DNA, effectors that synergistically activate the latent enzyme. Several facts suggested that PrrC is highly labile in the absence of the masking proteins. The core activity decayed with t1/2 below 1 min at 30 degrees C, and the PrrC portion of a fusion protein was unstable. Moreover, expression of prrC from its own promoter at low plasmid copy number did not allow detection of core activity. Yet, it sufficed for establishment of a latent, T4-inducible enzyme when complemented by the masking Hsd proteins, which were provided by another replicon. Interaction between the antagonistic components of latent anticodon nuclease was also demonstrated immunochemically. The coupling of anticodon nuclease with a DNA restriction modification system may serve to ward off its inadvertent toxicity and maintain it as an antiviral contingency.


Subject(s)
Bacterial Proteins/genetics , Escherichia coli Proteins , Escherichia coli/genetics , RNA, Transfer, Lys/metabolism , Ribonucleases/genetics , Viral Nonstructural Proteins/genetics , Amino Acid Sequence , Base Sequence , Binding Sites , DNA, Bacterial , Enzyme Activation , Escherichia coli/enzymology , Genes, Bacterial , Guanosine Triphosphate/metabolism , Molecular Sequence Data , Oligodeoxyribonucleotides , Ribonucleases/metabolism , Substrate Specificity , Viral Nonstructural Proteins/metabolism
6.
EMBO J ; 11(8): 3129-34, 1992 Aug.
Article in English | MEDLINE | ID: mdl-1639077

ABSTRACT

Phage T4-induced anticodon nuclease triggers cleavage-ligation of the host tRNA(Lys). The enzyme is encoded in latent form by the optional Escherichia coli locus prr and is activated by the product of the phage stp gene. Anticodon nuclease latency is attributed to the masking of the core function prrC by flanking elements homologous with type I restriction-modification genes (prrA-hsdM and prrD-hsdR). Activation of anticodon nuclease in extracts of uninfected prr+ cells required synthetic Stp, ATP and GTP and appeared to depend on endogenous DNA. Stp could be substituted by a small, heat-stable E. coli factor, hinting that anticodon nuclease may be mobilized in cellular situations other than T4 infection. Hsd antibodies recognized the anticodon nuclease holoenzyme but not the prrC-encoded core. Taken together, these data indicate that Hsd proteins partake in the latent ACNase complex where they mask the core factor PrrC. Presumably, this masking interaction is disrupted by Stp in conjunction with Hsd ligands. The Hsd-PrrC interaction may signify coupling and mutual enhancement of two prokaryotic restriction systems operating at the DNA and tRNA levels.


Subject(s)
DNA Restriction-Modification Enzymes/genetics , DNA Restriction-Modification Enzymes/metabolism , Escherichia coli/genetics , RNA, Transfer, Lys/metabolism , Ribonucleases/metabolism , T-Phages/genetics , Enzyme Activation , Escherichia coli/enzymology , Genes, Bacterial , Genes, Fungal , Genetic Complementation Test , Models, Biological , T-Phages/enzymology
7.
EMBO J ; 8(8): 2411-5, 1989 Aug.
Article in English | MEDLINE | ID: mdl-2676520

ABSTRACT

During phage T4 infection of Escherichia coli strains containing the prr locus the host tRNALys undergoes cleavage-ligation in reactions catalyzed by anticodon nuclease, polynucleotide kinase and RNA ligase. Known genetic determinants of anticodon nuclease are prr, which restricts T4 mutants lacking polynucleotide kinase or RNA ligase, and stp, the T4 suppressor of prr encoded restriction. The present communication describes an in vitro anticodon nuclease assay in which the specific cleavage of tRNALys is driven by an extract from E. coli prrr (restrictive) cells infected by phage T4. The in vitro anticodon nuclease reaction requires factor(s) encoded by prr, is stimulated by a synthetic Stp polypeptide and appears to require additional T4 induced factor(s) distinct from Stp.


Subject(s)
Escherichia coli/genetics , Ribonucleases/metabolism , T-Phages/genetics , Electrophoresis, Polyacrylamide Gel , Escherichia coli/enzymology , Kinetics , Protein Biosynthesis , RNA, Transfer, Lys/metabolism
8.
J Mol Biol ; 199(2): 373-7, 1988 Jan 20.
Article in English | MEDLINE | ID: mdl-3280805

ABSTRACT

Pre-existing host tRNAs are reprocessed during bacteriophage T4 infection of certain Escherichia coli strains. In this pathway, tRNALys is cleaved 5' to the wobble base by anticodon nuclease and is later restored in polynucleotide kinase and RNA ligase reactions. Anticodon nuclease depends on prr, a locus found only in host strains that restrict T4 mutants lacking polynucleotide kinase and RNA ligase; and on stp, the T4 suppressor of prr restriction. stp was cloned and the nucleotide sequences of its wild-type and mutant alleles determined. Their comparison defined an stp open reading frame of 29 codons at 162.8 to 9 kb of T4 DNA (1 kb = 10(3) base-pairs). We suggest that stp encodes a subunit of anticodon nuclease, perhaps one that harbors the catalytic site; while additional subunits, such as a putative prr gene product, impart protein folding environment and tRNA substrate recognition.


Subject(s)
Genes, Viral , Ribonucleases/genetics , T-Phages/genetics , Viral Nonstructural Proteins/genetics , Amino Acid Sequence , Base Sequence , DNA, Viral , Escherichia coli/genetics , Molecular Sequence Data
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