X-Ray cardiac angiographic vessel segmentation based on pixel classification using machine learning and region growing.

This work proposes a pixel-classification approach for vessel segmentation in x-ray angiograms. The proposal uses textural features such as anisotropic diffusion, features based on the Hessian matrix, mathematical morphology and statistics. These features are extracted from the neighborhood of each pixel. The approach also uses the ELEMENT methodology, which consists of creating a pixel-classification controlled by region-growing where the result of the classification affects further classifications of pixels. The Random Forests classifier is used to predict whether the pixel belongs to the vessel structure. The approach achieved the best accuracy in the literature (95.48%) outperforming unsupervised state-of-the-art approaches.

Influence of inlet water on the biotic and abiotic variables in a fish pond / Influência da água de entrada sobre as variáveis bióticas e abióticas em um viveiro de piscicultura

Abstract The effects of treated and untreated water inlets with macrophytes on the improvement of water quality and zooplankton community were evaluated in a fish pond with continuous water flow. Water and zooplankton samples were retrieved at four sites during nine months. There were differences (p<0.01) between inlet water from fish pond and inlet water from canal with macrophytes, featuring higher concentrations of nutrient load, mainly TAN and TP in the former. The inlet water from fish pond contained a higher number of abundant species (9 species), whilst the water supply from the canal with macrophytes had a greater richness (31 species) of zooplankton species. Results showed that inlet water without macrophytes directly affected the characteristics of the water column and the dominance of zooplankton species such as Thermocyclops decipiens, and greater abundance of Rotifera species. Since aquatic plants in the inlet water of fish pond analyzed showed lower allochthonous material loads from the previous fish pond, the management adopted with macrophytes may be applied to avoid eutrophication risks, common in farm ponds.

Resumo Os efeitos do abastecimento tratado e não tratado com macrófitas sobre a qualidade da água e comunidade zooplanctônica foram avaliados em um viveiro de piscicultura com fluxo contínuo de água. Houve maior concentração de fósforo total e nitrogênio amoniacal na água não tratada (p<0,01). Na água de entrada sem tratamento de macrófitas foi observado maior número de espécies abundantes (9 espécies), contudo, a entrada de água tratada com macrófitas apresentou maior riqueza de espécies (31 espécies) zooplanctônicas. Os resultados obtidos mostraram que a água de entrada sem macrófitas influenciou as características da coluna de água com predominância de espécies zooplanctônicas, como Thermocyclops decipiens e maior abundância de espécies de Rotifera. A água tratada com macrófita apresentou menor carga de materiais alóctones provenientes do viveiro anterior, indicando que o manejo adotado com macrófitas pode ser aplicado para evitar riscos de eutrofização, comuns em piscicultura.

Influence of inlet water on the biotic and abiotic variables in a fish pond.

The effects of treated and untreated water inlets with macrophytes on the improvement of water quality and zooplankton community were evaluated in a fish pond with continuous water flow. Water and zooplankton samples were retrieved at four sites during nine months. There were differences (p<0.01) between inlet water from fish pond and inlet water from canal with macrophytes, featuring higher concentrations of nutrient load, mainly TAN and TP in the former. The inlet water from fish pond contained a higher number of abundant species (9 species), whilst the water supply from the canal with macrophytes had a greater richness (31 species) of zooplankton species. Results showed that inlet water without macrophytes directly affected the characteristics of the water column and the dominance of zooplankton species such as Thermocyclops decipiens, and greater abundance of Rotifera species. Since aquatic plants in the inlet water of fish pond analyzed showed lower allochthonous material loads from the previous fish pond, the management adopted with macrophytes may be applied to avoid eutrophication risks, common in farm ponds.

Functional expression, monodispersity and conformational changes in the SBMV virus viral VPg on binding TFE.

Southern bean mosaic virus (SBMV) RNA purified from infected plants was used for cloning the viral genome-linked protein (VPg) and was subsequently expressed in Escherichia coli. Circular dichroism (CD), dynamic light scattering (DLS) and saturation transfer difference (STD) by nuclear magnetic resonance (NMR) measurements were employed to determine the degree of monodispersity and to investigate the conformational changes in the absence and presence of trifluoroethanol (TFE) which indicated increased helical content with increasing concentration of TFE. 8-Anilino-1-naphthalenesulfonic acid (ANS) was used as a probe to compare the unfolding regions of the protein before and after addition of TFE. The results indicated that although the TFE concentration influences VPg folding, it does not play a role in nucleotide binding and that the local solvent hydrophobicity causes significant conformational changes.

A novel approach for the automated segmentation and volume quantification of cardiac fats on computed tomography.

The deposits of fat on the surroundings of the heart are correlated to several health risk factors such as atherosclerosis, carotid stiffness, coronary artery calcification, atrial fibrillation and many others. These deposits vary unrelated to obesity, which reinforces its direct segmentation for further quantification. However, manual segmentation of these fats has not been widely deployed in clinical practice due to the required human workload and consequential high cost of physicians and technicians. In this work, we propose a unified method for an autonomous segmentation and quantification of two types of cardiac fats. The segmented fats are termed epicardial and mediastinal, and stand apart from each other by the pericardium. Much effort was devoted to achieve minimal user intervention. The proposed methodology mainly comprises registration and classification algorithms to perform the desired segmentation. We compare the performance of several classification algorithms on this task, including neural networks, probabilistic models and decision tree algorithms. Experimental results of the proposed methodology have shown that the mean accuracy regarding both epicardial and mediastinal fats is 98.5% (99.5% if the features are normalized), with a mean true positive rate of 98.0%. In average, the Dice similarity index was equal to 97.6%.

Influência da poluição aérea gerada pelo tráfego veicular na produção do óleo essencial e das atividades antifúngica e citotóxica in vitro de Cyrtocymura scorpioides (Lam. ) H. Rob. (Asteraceae) / Air pollution influence generated by vehicular traffic in essential oil production and antifungal and cytotoxic activities in vitro Cyrtocymura scorpioides (Lam. ) H. Rob. (Asteraceae)

RESUMO Cyrtocymura scorpioides (sin. Vernonia scorpioides (Lam.) Pers.), Piracá é utilizada popularmente para tratamento de úlceras, traumatismos, candidíase, processos inflamatórios e dores musculares. Objetivou-se verificar nas plantas cultivadas na Vila Nair, Jardim São Dimas e Urbanova em São José dos Campos - SP, a influência da poluição veicular nos rendimentos da matéria seca (folhas), no óleo essencial, e no extrato bruto, bem como a ação citotóxica em células HEP-2 e L929, e identificar os componentes do óleo essencial e ação fungicida em Candida albicans. As estacas (54) foram cultivadas durante 6 meses em solo + adubo (2:1) na Universidade do Vale do Paraíba - UNIVAP, e distribuídas nas estações Dutra (E1 - tráfego intenso), Teotônio (E2 - tráfego médio) e Urbanova (E3 - tráfego baixo), onde 18 mudas foram cultivadas durante 6 meses, sendo 3 repetições de 6 plantas. O óleo essencial foi extraído por hidrodestilação e seus componentes identificados por cromatografia gasosa acoplado a espectrômetro de massas (CG-MS), através de indice de similaridade com a base de espectros Wiley L. O extrato bruto foi concentrado por rotavapor. A ação fúngica foi avaliada pelo teste de difusão em disco e a citotoxicidade pelo teste MTT. Em Urbanova (E3) verificouse maior rendimento da matéria seca, do extrato bruto e do óleo essencial. Identificou-se no óleo essencial: ß-cariofileno, α-cariofileno, germacreno D, delta-cadineno e cariofileno. O Óleo Essencial possui possui baixa ação fungicida em C. albicans, enquanto o extrato hidroalcóolico se mostrou citotóxico para L929 e HEp-2.

ABSTRACT Cyrtocymura scorpioides (syn. Vernonia scorpioides (Lam.) Pers.), known as Piracá, is popularly used for the treatment of ulcers, trauma, candidiasis, inflammatory disorders, and muscle pain. This study aimed to assess the influence of vehicular pollution on the yield of dry matter (leaves), essential oil, and crude extract, and the cytotoxic action in HEP-2 and L929 cells. This study also aimed to identify the components of the essential oil, and verify its fungicidal action against Candida albicans in plants grown in Vila Nair, Jardim São Dimas, and Urbanova, São José dos Campos - SP, Brazil. The seedlings (54) were grown in soil + fertilizer (2:1) at the Universidade do Vale do Paraiba - UNIVAP, and distributed to different stations, Dutra (E1 - heavy traffic), Teotônio (E2 - medium traffic), and Urbanova (E3 - low traffic), where 18 seedlings were cultivated for 6 months, with 3 replicates of 6 plants. The essential oil was extracted by hydrodistillation and its components were identified by by Gas chromatography - mass spectrometry (GC-MS), with a similarity index computed using the Wiley L spectra. The crude extract was concentrated in a Buchi Rotary Evaporator R-114, the fungicidal action and cytoptoxicity were evaluated using the disk diffusion method and the MTT test, respectively. In Urbanova (E3), high yields of dry matter, crude extract, and essential oil were obtained. The following components were identified in the oil: ß-caryophyllene, α -caryophyllene, germacrene D, delta-cardinene, and caryophyllene oxide. The oil was found to have low fungicidal action against C. albicans, while the hydroalcoholic extract was cytotoxic to L929 and HEP-2.

Growth of Haematococcus pluvialis Flotow in alternative media.

Current study investigates the effect of two alternative media NPK (20-5-20) fertilizer and NPK plus macrophyte (M+NPK) compared to the commercial medium (WC) under growth rate and physiological parameters in batch culture mode (2-L), and verifies whether the use of fertilizer (NPK) and macrophyte (Eichhornia crassipes) would be a good tool for Haematococcus pluvialis culture in the laboratory. The highest number of cells of H. pluvialis has been reported in NPK medium (5.4 × 105 cells.mL-1) on the 28th day, and in the M+NPK and WC media (4.1 × 105 cells.mL-1 and 2.1 × 105 cells.mL-1) on the 26th day, respectively. Chlorophyll-a contents were significantly higher (p<0.05) in NPK medium (41-102 µg.L-1) and lower in WC and M+NPK media (14-61 µg.L-1). The astaxanthin content was less than 0.04 mg.L-1. Production cost of 10-L of H. pluvialis was low in all media, and NPK and M+NPK media had a cost reduction of 65% and 82%, respectively when compared with commercial medium (WC). The use of a medium based on commercial fertilizer and macrophyte (E. crassipes) produced a new medium formulation that proved to be efficient, at least in batch culture mode, in promoting high density culture of H. pluvialis. NPK and macrophyte (E. crassipes) medium seems to be an adequate alternative to replace the conventional one (WC).

Growth of Haematococcus pluvialis Flotow in alternative media / Crescimento de Haematococcus pluvialis Flotow em meios alternativos

Abstract Current study investigates the effect of two alternative media NPK (20-5-20) fertilizer and NPK plus macrophyte (M+NPK) compared to the commercial medium (WC) under growth rate and physiological parameters in batch culture mode (2-L), and verifies whether the use of fertilizer (NPK) and macrophyte (Eichhornia crassipes) would be a good tool for Haematococcus pluvialis culture in the laboratory. The highest number of cells of H. pluvialis has been reported in NPK medium (5.4 × 105cells.mL–1) on the 28th day, and in the M+NPK and WC media (4.1 × 105 cells.mL–1 and 2.1 × 105 cells.mL–1) on the 26th day, respectively. Chlorophyll-a contents were significantly higher (p<0.05) in NPK medium (41-102 µg.L–1) and lower in WC and M+NPK media (14-61 µg.L–1). The astaxanthin content was less than 0.04 mg.L–1. Production cost of 10-L of H. pluvialis was low in all media, and NPK and M+NPK media had a cost reduction of 65% and 82%, respectively when compared with commercial medium (WC). The use of a medium based on commercial fertilizer and macrophyte (E. crassipes) produced a new medium formulation that proved to be efficient, at least in batch culture mode, in promoting high density culture of H. pluvialis. NPK and macrophyte (E. crassipes) medium seems to be an adequate alternative to replace the conventional one (WC).

Resumo O presente estudo investigou o efeito de dois meios alternativos, NPK (20-5-20) e NPK mais macrófita (M+NPK), em relação ao meio comercial (WC) para avaliar a taxa de crescimento e parâmetros fisiológicos em cultivo estático (2-L), a fim de verificar se o fertilizante (NPK) e a macrófita (Eichhornia crassipes) podem ser utilizados no cultivo de Haematococcus pluvialis em laboratório. O maior número de células de H. pluvialis foi observado no meio NPK (5,4 × 105 células.mL–1) no vigésimo oitavo dia, e nos meios M+NPK e WC foi de 4,1 × 105 células.mL–1 e 2,1 × 105.celulas.mL–1 no vigésimo sexto dia, respectivamente. Os teores de clorofila-a foram significativamente maiores (p<0,05) em meio NPK (41-102 g.L–1) quando comparado aos meios WC e M+NPK (14-61 g.L–1). O teor de astaxantina foi menor que 0,04 mg.L–1. O custo de produção de 10-L de H. pluvialis foi baixo em todos os meios sendo que os meios NPK e M+NPK apresentaram uma redução de custos de 65% e 82%, respectivamente, quando comparados ao meio comercial. O meio contendo fertilizante e o de macrófita (E. crassipes) obtiveram resultados eficientes em cultivo estático, com alta densidade celular de H. pluvialis. O meio NPK e o de macrófita (E. crassipes) demonstraram ser uma alternativa adequada para substituir o meio comercial (WC).

[Calcifying tendinitis of the rotator cuff with focal umeral osteolysis. Imaging features]. / Tendinopatia calcificante da coifa dos rotadores com osteólise umeral focal: achados imagiológicos.

Calcifying tendinitis occurs most commonly in the rotator cuff tendons, particularly involving the supraspinatus tendon insertion, and is often asymptomatic. Cortical erosion secondary to calcifying tendinitis has been reported in multiple locations, including in the rotator cuff tendons. The authors report two cases of symptomatic calcifying tendinitis involving the infraspinatus tendon with cortical erosion with correlative radiographic, and MR findings. The importance of considering this diagnosis when evaluating lytic lesions of the humerus and the imaging differential diagnosis of calcifying tendinitis and cortical erosion are discussed.

[Calcifying tendinitis of the rotator cuff with focal umeral osteolysis. Imaging features.] / TENDINOPATIA CALFICICANTE COM OSTEÓLISE UMERAL FOCAL. ACHADOS IMAGIOLÓGICOS.

Calcifying tendinitis occurs most commonly in the rotator cuff tendons, particularly involving the supraspinatus tendon insertion, and is often asymptomatic. Cortical erosion secondary to calcifying tendinitis has been reported in multiple locations, including in the rotator cuff tendons. The authors report two cases of symptomatic calcifying tendinitis involving the infraspinatus tendon with cortical erosion with correlative radiographic, and MR findings. The importance of considering this diagnosis when evaluating lytic lesions of the humerus and the imaging differential diagnosis of calcifying tendinitis and cortical erosion are discussed.

Growth and development time of subtropical Cladocera Diaphanosoma birgei Korinek, 1981 fed with different microalgal diets.

The aim of this work was to investigate the growth performance of Diaphanosoma birgei fed with two Chlorophyceae algae, Ankistrodesmus gracilis and Haematococcus pluvialis using monoalgal diets and simpler mixed diets. D. birgei was daily fed on four treatments: 1) 100% Ankistrodesmus gracilis (Ag); 2) 100% Haematoccocus pluvialis (Hp); 3) 25% A. gracilis + 75% H. pluvialis (Ag-25+Hp-75) and 4) 75% A. gracilis + 25% H. pluvialis (Ag-75+Hp-25). The fecundity curve of D. birgei showed that the mixed feed Ag-25+Hp-75 and temperature 24±2°C triggered fast fecundity at approximately two days. The fecundity was low when based only on H. pluvialis (Hp), albeit with greater longevity (19 days) and a higher number of broods (8). D. birgei fed on Ag and Ag-75+Hp-25 diets in this experiment sustained higher growth rate and higher lipid content in these treatments. The present study showed that A. gracilis diet and mixed microalgae diets tested were able to support the egg production and development of D. birgei.

[Arterio-arterial fistula between pulmonary and intercostal arteries--case report of "unilateral rib notching"]. / Fístula arterio-arterial entre a artéria pulmonar e artérias intercostais--a propósito de um caso clínico de "unilateral rib notching".

The authors present a clinical case of a 35-year-old patient who was diagnosed with intercostal artery-to-pulmonary artery fistula and review the literature of systemic-to- pulmonary fistulae based on radiological findings of an exceptional case report.

Effects of some parameters in upscale culture of Haematococcus pluvialis Flotow.

Growth rate and medium parameters between two bench scale volumes (13-L and 250-L) were compared. Experiments were maintained batch mode and culture parameters were periodically measured during a 13-day period. Culture growth during the cultivation of algae Haematococcus pluvialis was determined qualitatively by cell counting, optical density, dry weight, ash content, amount of chlorophyll-a, total organic carbon content and by direct measuring of medium nutrients and some abiotic aspects. Vegetative cell growth was higher when cultured in 13-L with 1.33 x 10(5) cells.mL(-1) on the 12th day than when cultured in 250-L. Significant difference (p < 0.05) in the biology and water culture of H. pluvialis, with the exception of dry weight, ash, nitrite and ammonia, was reported between the volumes. Data obtained in current study for the upscale culture maintenance of H. pluvialis in laboratory conditions shows that it should be undertaken in a 13-L volume due to a greater time span of cells in a vegetative state, greater cell density, lipids and chlorophyll-a contents. Light was of paramount importance on the direct performance of H. pluvialis on the algal biological conditions.

Detection of hantaviruses in Brazilian rodents by SYBR-Green-based real-time RT-PCR.

Current knowledge of the pathogenic hantavirus indicates that wild rodents are its primary natural reservoir. Specific primers to detect the presence of viral genomes were developed using an SYBR-Green-based real-time RT-PCR protocol. One hundred sixty-four rodents native to the Atlantic Forest biome were captured in São Paulo State, Brazil, and their tissues were tested. The presence of hantavirus RNA was detected in sixteen rodents: three specimens of Akodon montensis, three of Akodon cursor, two of Necromys lasiurus, one of Juliomys sp., one of Thaptomys nigrita, five of Oligoryzomys nigripes, and one of Oryzomys sp. This SYBR Green real-time RT-PCR method for detection of hantavirus may be useful for surveying hantaviruses in Brazil.

Normal flow-mediated vasodilatation of the brachial artery and carotid artery intima-media thickness in subclinical hypothyroidism

Subclinical hypothyroidism (SHT) is a disease for which exact therapeutic approaches have not yet been established. Previous studies have suggested an association between SHT and coronary heart disease. Whether this association is related to SHT-induced changes in serum lipid levels or to endothelial dysfunction is unclear. The aim of this study was to determine endothelial function measured by the flow-mediated vasodilatation of the brachial artery and the carotid artery intima-media thickness (IMT) in a group of women with SHT compared with euthyroid subjects. Triglycerides, total cholesterol, HDL-C, LDL-C, apoprotein A (apo A), apo B, and lipoprotein(a) were also determined. Twenty-one patients with SHT (mean age: 42.4 ± 10.8 years and mean thyroid-stimulating hormone (TSH) levels: 8.2 ± 2.7 µIU/mL) and 21 euthyroid controls matched for body mass index, age and atherosclerotic risk factors (mean age: 44.2 ± 8.5 years and mean TSH levels: 1.4 ± 0.6 µIU/mL) participated in the study. Lipid parameters (except HDL-C and apo A, which were lower) and IMT values were higher in the common carotid and carotid bifurcation of SHT patients with positive serum thyroid peroxidase antibodies (TPO-Ab) (0.62 ± 0.2 and 0.62 ± 0.16 mm for the common carotid and carotid bifurcation, respectively) when compared with the negative TPO-Ab group (0.55 ± 0.24 and 0.58 ± 0.13 mm, for common carotid and carotid bifurcation, respectively). The difference was not statistically significant. We conclude that minimal thyroid dysfunction had no adverse effects on endothelial function in the population studied. Further investigation is warranted to assess whether subclinical hypothyroidism, with and without TPO-Ab-positive serology, has any effect on endothelial function.

Normal flow-mediated vasodilatation of the brachial artery and carotid artery intima-media thickness in subclinical hypothyroidism.

Subclinical hypothyroidism (SHT) is a disease for which exact therapeutic approaches have not yet been established. Previous studies have suggested an association between SHT and coronary heart disease. Whether this association is related to SHT-induced changes in serum lipid levels or to endothelial dysfunction is unclear. The aim of this study was to determine endothelial function measured by the flow-mediated vasodilatation of the brachial artery and the carotid artery intima-media thickness (IMT) in a group of women with SHT compared with euthyroid subjects. Triglycerides, total cholesterol, HDL-C, LDL-C, apoprotein A (apo A), apo B, and lipoprotein(a) were also determined. Twenty-one patients with SHT (mean age: 42.4 +/- 10.8 years and mean thyroid-stimulating hormone (TSH) levels: 8.2 +/- 2.7 microIU/mL) and 21 euthyroid controls matched for body mass index, age and atherosclerotic risk factors (mean age: 44.2 +/- 8.5 years and mean TSH levels: 1.4 +/- 0.6 microIU/mL) participated in the study. Lipid parameters (except HDL-C and apo A, which were lower) and IMT values were higher in the common carotid and carotid bifurcation of SHT patients with positive serum thyroid peroxidase antibodies (TPO-Ab) (0.62 +/- 0.2 and 0.62 +/- 0.16 mm for the common carotid and carotid bifurcation, respectively) when compared with the negative TPO-Ab group (0.55 +/- 0.24 and 0.58 +/- 0.13 mm, for common carotid and carotid bifurcation, respectively). The difference was not statistically significant. We conclude that minimal thyroid dysfunction had no adverse effects on endothelial function in the population studied. Further investigation is warranted to assess whether subclinical hypothyroidism, with and without TPO-Ab-positive serology, has any effect on endothelial function.

A serosurvey for hantavirus infection in wild rodents from the states of Rio de Janeiro and Pernambuco, Brazil.

Sera from 269 rodents obtained during the routine surveillance operations in plague areas of Rio de Janeiro and Pernambuco states, Brazil were tested by ELISA for specific IgG antibodies against a recombinant nucleocapsid (N) protein of Araraquara hantavirus. ELISA-positive sera were submitted to reverse transcriptase-polymerase chain reaction (RT-PCR) for amplification of the virus genome and later sequencing for identification of the viral variant. The samples from the state of Pernambuco were antibody negative, and although four from Rio de Janeiro were ELISA-positive, they failed to yield viral cDNA by RT-PCR. This is the first report of the presence of antibodies to a hantavirus among rodents from Rio de Janeiro and suggests the possibility of human cases of hantavirus pulmonary syndrome (HPS) in that state, although no case has yet been reported.

Contagem de reticulócitos de cães saudáveis ou anêmicos pela citometria de fluxo / Count of reticulocyte counts of healthy or anemic dogs by flow cytometry

Compararam-se os resultados da contagem de reticulócitos pela microscopia de luz e pelo método da citometria de fluxo em 25 cães saudáveis (controle), 60 cães com anemia regenerativa e 40 com anemia arregenerativa. Houve diferença nas contagens absolutas obtidas pela microscopia de luz e pela citometria de fluxo nos três grupos estudados. A contagem de reticulócitos foi mais alta pela citometria de fluxo que a contagem pela microscopia de luz, mostrando ser um método mais sensível, simples e seguro para a quantificação de reticulócitos.

Counts of reticulocytes using both the light microscopy and flow cytometry (FC) methods in 25 healthy control dogs, 60 dogs with regenerative anemia, and 40 dogs with non-regenerative anemia were compared. The absolute counts were submitted to the paired t-Student test, which determined significant differences (P<0.0001) between those methods in the three studied groups. Counts of retyculocytes were higher under flow cytometry, which proved to be a more sensitive method. Flow cytometry is a simple and reliable method for the quantification of reticulocytes.