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1.
J Org Chem ; 86(10): 7046-7058, 2021 May 21.
Article in English | MEDLINE | ID: mdl-33890780

ABSTRACT

Porous materials, which can capture a specific compound from a hard-to-separate molecular mixture, are strongly desired for practical separation and purification processes. Aiming to develop such materials, we have investigated the performance of our original host compounds, [3,3'-thiobis(5-tert-butyl-2-hydroxybenzene)-1,1'-diyl]diacetic acid (2) and its monopropyl ester (3), in discriminating among regio- or stereoisomers of three groups of amines, 2-, 3-, and 4-methylpyridine, 2-, 6-, and 8-methylquinoline, and cis- and trans-4-cyclohexanamine. Diacid 2 selectively included 4-methylpyridine in hexane and 3-methylpyridine in toluene in competitive inclusion among the three regioisomers. Mechanistic studies revealed that the inclusions of 3- and 4-methylpyridine are favored under kinetic and thermodynamic control, respectively. Solvent-dependent switching in guest selectivity was also observed in competitive inclusion among the methylquinoline isomers with diacid 2, whereas trans-4-methylcyclohexanamine was selectively included over the cis-isomer by monoester 3, as well as diacid 2, regardless of the solvent employed. X-ray crystallographic analysis of the resulting inclusion crystals suggests that the wide guest scope of the host compounds originates from their flexible ability to form complexes with amines.

2.
RSC Adv ; 10(58): 35473-35479, 2020 Sep 21.
Article in English | MEDLINE | ID: mdl-35515675

ABSTRACT

The extraction ability of 1,3-diaminocalix[4]arene (2: H2L) toward platinum group metals (PGMs) has been investigated, which revealed that 2 is able to extract Pd(ii) and Pt(ii) from hydrochloric acid via different extraction modes. The extraction species for Pd(ii) and Pt(ii) are [PdL] and [Pt2Cl6(H3L)2], respectively, as evidenced by equilibrium analysis and X-ray crystallography. In [PdL], the two phenoxide oxygens and two amino nitrogens of L2- coordinate to the Pd ion. On the other hand, in [Pt2Cl6(H3L)2], two anionic trichloro complexes PtCl3 - are sandwiched between two H3L+, in which one amino nitrogen directly coordinates to a PtCl3 - species and another protonated amino group forms an ion pair with another PtCl3 -. Utilizing the different extraction modes, switching of the extraction selectivity has been achieved in the competitive extraction between Pd(ii) and Pt(ii) by varying the concentrations of H+ and Cl- in the aqueous phase. Finally, from the extracted organic phase, back-extraction of Pd(ii) and Pt(ii) was easily performed, respectively.

3.
Front Microbiol ; 9: 784, 2018.
Article in English | MEDLINE | ID: mdl-29740415

ABSTRACT

In mammals, D-Ser is synthesized by serine racemase (SR) and degraded by D-amino acid oxidase (DAO). D-Ser acts as an endogenous ligand for N-methyl-D-aspartate (NMDA)- and δ2 glutamate receptors, and is involved in brain functions such as learning and memory. Although SR homologs are highly conserved in eukaryotes, little is known about the significance of D-Ser in non-mammals. In contrast to mammals, the slime mold Dictyostelium discoideum genome encodes SR, DAO, and additionally D-Ser specific degradation enzyme D-Ser dehydratase (DSD), but not NMDA- and δ2 glutamate receptors. Here, we studied the significances of D-Ser and DSD in D. discoideum. Enzymatic assays demonstrated that DSD is 460- and 1,700-fold more active than DAO and SR, respectively, in degrading D-Ser. Moreover, in dsd-null cells D-Ser degradation activity is completely abolished. In fact, while in wild-type D. discoideum intracellular D-Ser levels were considerably low, dsd-null cells accumulated D-Ser. These results indicated that DSD but not DAO is the primary enzyme responsible for D-Ser decomposition in D. discoideum. We found that dsd-null cells exhibit delay in development and arrest at the early culmination stage. The efficiency of spore formation was considerably reduced in the mutant cells. These phenotypes were further pronounced by exogenous D-Ser but rescued by plasmid-borne expression of dsd. qRT-PCR analysis demonstrated that mRNA expression of key genes in the cAMP signaling relay is perturbed in the dsd knockout. Our data indicate novel roles for D-Ser and/or DSD in the regulation of cAMP signaling in the development processes of D. discoideum.

4.
J Org Chem ; 83(4): 2235-2243, 2018 02 16.
Article in English | MEDLINE | ID: mdl-29385344

ABSTRACT

The development of separation materials for hard-to-separate molecular mixtures is highly desired from environmental and economic perspectives. Although the crystal of p-tert-butylthiacalix[4]arene exhibits high guest selectivity in inclusion from a mixture of molecules with similar sizes and shapes, it cannot include molecules larger than its calix cavity. To extend its guest inclusivity, we designed and synthesized an open-chain host, [3,3'-thiobis(5-tert-butyl-2-hydroxybenzene)-1,1'-diyl]diacetic acid (4). The competitive inclusion among toluidine isomers using compound 4 gave inclusion crystals containing the p-isomer in 1:1 (host/guest) ratio, with lesser amounts of other isomers and/or solvent molecules. The isomer selectivity varied between 66% and 97% depending on the solvent employed. X-ray analysis of inclusion crystals 4·p-toluidine·MeCN and 4·p-toluidine·(o-toluidine)0.5 revealed that compound 4 includes p-toluidine by forming macrocyclic 2:2 inclusion complex(es) and that its higher-order structure has vacant spaces, in which molecules other than p-toluidine are included. Compound 4 was then transformed into monopropyl ester 5 to fill the vacant spaces with propyl moieties. Compound 5 included p-toluidine with high selectivity (∼96%) without the coinclusion of other molecules, regardless of the solvent employed.

5.
Chemosphere ; 197: 181-184, 2018 Apr.
Article in English | MEDLINE | ID: mdl-29348048

ABSTRACT

The treatment of cesium-contaminated wastewater has become one of the biggest issues. The selective Cs+ removal from wastewater containing competitive alkali metal ions such as Na+ is desired to reduce the volume of sludge. Therefore, the present work focused on water-soluble calix[4]arene-bis-crown-6 (W-BisC6) to selectively capture Cs+. For characterization of the complex, UV-vis spectroscopy is commonly used, however, due to the limited availability of information it can be hard to quickly identify the specific structures of some complexes. In this work, the electrospray ionization time of flight spectrometry (ESI-TOF-MS) is successfully utilized to identify the number and type of cations in W-BisC6-cation complexes. ESI-TOF-MS accurately recognized 4 types of complex (W-BisC6-Na+, W-BisC6-Cs+, W-BisC6-2Na+, W-BisC6-Na+-Cs+), and the experimental and simulated results were almost perfectly matched. It also revealed the difficulty of W-BisC6-2Cs+ complex formation under the present conditions. Thus, this technique is significantly helpful for rapid identification of the specific structures of complexes during Cs+-contaminated wastewater treatment.


Subject(s)
Calixarenes/analysis , Cesium/analysis , Sewage/analysis , Sodium/analysis , Spectrometry, Mass, Electrospray Ionization/methods , Calixarenes/chemistry , Cations/analysis , Cations/chemistry , Cesium/chemistry , Sewage/chemistry , Sodium/chemistry , Spectrum Analysis , Water/chemistry , Water Purification/methods
6.
J Org Chem ; 80(2): 1070-81, 2015 Jan 16.
Article in English | MEDLINE | ID: mdl-25495561

ABSTRACT

A facile synthesis of 1,3-diiodocalix[4]arene 6 has been achieved by copper-catalyzed iodination of the 1,3-bistriflate ester 2a of p-tert-butylcalix[4]arene. After protection of the hydroxy groups with iodomethane, diiodide 6 is subjected to halogen­lithium exchange with butyllithium, followed by carbonation with CO2 or formylation with N-formylpiperidine and subsequent deprotection of the hydroxy groups to give novel dicarboxylic acid 11 or dialdehyde 16 in practical yields. The iodo groups of diiodide 6 pass through the calixarene macrocycle; the activation free energy for the conversion of the more stable syn conformer 6syn to the less stable anti conformer 6anti is ΔG(⧧) = 104 kJ mol(­1) at 298 K. Dialdehyde 16 shows fast self-exchange between two equivalent species with a cone conformation, ΔG(⧧), being 63.2 kJ mol(­1). Dicarboxylic acid 11 adopts a cone conformation and forms a dimer in solution as suggested by 1H NMR and X-ray crystallographic analyses. The arrangement of the iodide groups of compound 6 can be fixed predominantly to anti (17a and 17b) by introducing bulky alkyl groups (e.g., propyl groups) onto the hydroxy groups. The stereospecific alkylation of the iodo groups of the resulting di-O-alkylated anti-1,3-diiodides provides access to the anti-1,3-dialkylcalixarenes 19, which is otherwise difficult to obtain.


Subject(s)
Calixarenes/chemical synthesis , Phenols/chemical synthesis , Calixarenes/chemistry , Crystallography, X-Ray , Halogenation , Magnetic Resonance Spectroscopy , Molecular Conformation , Phenols/chemistry
7.
J Org Chem ; 78(2): 597-605, 2013 Jan 18.
Article in English | MEDLINE | ID: mdl-23215449

ABSTRACT

Dielectrically controlled resolution (DCR) has been achieved during the crystallization of (S)-1-phenylethylamides of racemic 1,1'-binaphthalene-2,2'-dicarboxylic acid (RS(a),S)-1. For example, a water well-shaped plot is obtained for the diastereomeric excess (de) of the deposited amide versus the solvent permittivity (ε) for the crystallization of (RS(a),S)-1 from three-component mixed solvents, consisting of 25 vol % of dichloromethane and 75 vol % of varying ratios of two solvents (i.e., an alcohol and either hexane or water). The de value drastically changes within two narrow ε ranges and diastereomerically pure crystals of either (R(a),S)-1 (13.9 ≤ ε ≤ 17.9) or (S(a),S)-1·CH(2)Cl(2) (ε ≤ 11.9 and ε ≥ 21.8) deposit, depending on the solvent permittivity. X-ray crystallographic analyses reveal that the major difference between the crystal structures of (S(a),S)-1 and (R(a),S)-1 is the presence of solvent molecules that fill the spatial voids in the (S(a),S)-1 crystals. The ε-dependence of the chemical shifts of (S(a),S)-1 and (R(a),S)-1 suggests that their aggregation states are similar in the same solvents and change discontinuously at two ε values. The ε-dependence of the C═O stretching vibrations suggests that the lower ε is a transition point where the amide molecules, which aggregate through intermolecular hydrogen bonds in low-permittivity solvents, begin to dissociate. An absorption experiment suggests that dichloromethane is easily incorporated into solvent-free (S(a),S)-1 crystals in high-permittivity solvents. On the basis of these observations, a feasible molecular mechanism is proposed for the present DCR phenomenon.


Subject(s)
Carboxylic Acids/chemistry , Naphthalenes/chemistry , Crystallization , Crystallography, X-Ray , Hydrogen Bonding , Magnetic Resonance Spectroscopy , Models, Molecular , Solvents/chemistry , Stereoisomerism
8.
Org Lett ; 13(13): 3292-5, 2011 Jul 01.
Article in English | MEDLINE | ID: mdl-21657252

ABSTRACT

Powdery crystals of p-tert-butylthiacalix[4]arene (2) selectively include EtOH from 1:1 mixtures of MeOH-EtOH and EtOH-PrOH, and EtCO(2)H from HCO(2)H-EtCO(2)H. On the other hand, no acid is included from HCO(2)H-MeCO(2)H, even though MeCO(2)H is included from the neat acid. The origins of these phenomena are discussed based on X-ray analysis of inclusion crystals prepared separately by crystallization.


Subject(s)
Alcohols/chemistry , Carboxylic Acids/chemistry , Phenols/chemistry , Crystallography, X-Ray , Models, Molecular , Molecular Structure
9.
J Org Chem ; 76(7): 2168-79, 2011 Apr 01.
Article in English | MEDLINE | ID: mdl-21381729

ABSTRACT

Practical methods are described for the preparation of monoamines 4 and 1,3-diamines 5, bearing one or two amino group(s) instead of the hydroxy group(s) at the 28-position or at both the 26- and 28-positions of p-tert-butylcalix[4]arene (1a) and p-tert-butylthiacalix[4]arene (1b), via the Ullmann-type amination or amidation. Thus, the copper-catalyzed or mediated amination of the 1,3-bistriflate ester (2a) of 1a with benzylamine affords either mono(benzylamino) triflate 7a or 1,3-bis(benzylamine) 8 in a high yield, depending on the reaction conditions. On the other hand, the 1,3-bistriflate ester (2b) of 1b resists disubstitution and produces, under stoichiometric conditions, mono(benzylamino) triflate 7b. The disubstitution of 2b is achieved by amidation with tosylamide, giving 1,3-bis(tosylamide) 17b. The hydrogenolysis of the benzylamino moiety of 7a, followed by the hydrolysis of the Tf moiety, affords monoamine 4a, while the hydrogenolysis of 8 affords 1,3-diamine 5a. The amino moiety of 7b can be deprotected under acidic conditions to give, after hydrolysis, monoamine 4b. The hydrolysis of 17b affords 1,3-diamine 5b. The overall yields of compounds 4a, 4b, 5a, and 5b are 72%, 45%, 78%, and 24%, respectively, based on commercially available compounds 1 and are much higher than the ones previously reported in the literature.


Subject(s)
Calixarenes/chemical synthesis , Diamines/chemistry , Mesylates/chemistry , Amination , Calixarenes/chemistry , Magnetic Resonance Spectroscopy , Molecular Structure
10.
J Org Chem ; 75(22): 7855-62, 2010 Nov 19.
Article in English | MEDLINE | ID: mdl-21033692

ABSTRACT

The Lewis acid-mediated direct carboxylation of aromatic compounds with CO2 is efficiently promoted by the addition of silyl chlorides bearing three alkyl and/or aryl substituents in total on the silicon atom. Thus, toluene, xylenes, mesitylene, and some other alkylbenzenes are treated with a 1:1 mixture of AlBr3 and Ph3SiCl in neat substrates under CO2 pressure (3.0 MPa) at room temperature, to give the corresponding carboxylic acids in 60-97% yields, based on AlBr3. Polycyclic arenes, including naphthalene, phenanthrene, and biphenyl, are regioselectively carboxylated in 91-98% yields with the aid of 1 molar equiv of AlBr3 and Ph3SiCl in an appropriate solvent, chosen from benzene, chlorobenzene, and fluorobenzene. These solvents, as well as bromobenzene, resist carboxylation; however, they are also carboxylated in moderate yields when treated with a 1:5 mixture of AlBr3 and (i)PrSiCl at elevated temperatures. The FT-IR spectrum of a mixture prepared by exposing a suspension of AlBr3 and Ph3SiCl in cyclohexane to CO2 exhibits an absorption band around 1650 cm(-1), assigned to the C═O stretching vibration of a species consisting of CO2, AlBr3, and Ph3SiCl, which suggests that the silyl chlorides activate CO2 in cooperation with AlBr3. (1)H NMR analysis of unworked-up reaction mixtures reveals that the products merge as aluminum carboxylates. The mass balance concerning silicon indicates that the silyl chlorides are recycled during the reaction sequence. On the basis of these observations, a feasible mechanism is proposed for the present carboxylation.


Subject(s)
Aluminum Compounds/chemistry , Bromates/chemistry , Carbon Dioxide/chemistry , Carboxylic Acids/chemistry , Hydrocarbons, Halogenated/chemistry , Lewis Acids/chemistry , Silicon Compounds/chemistry , Molecular Structure , Spectroscopy, Fourier Transform Infrared
11.
Org Lett ; 10(13): 2845-8, 2008 Jul 03.
Article in English | MEDLINE | ID: mdl-18540672

ABSTRACT

Stereocontrol in the synthesis of dinuclear metal complexes of sulfinylcalix[4]arenes 2 has been achieved by the arrangement of sulfinyl functionalities. Thus, the treatment of the(rtct) isomer of 2 (2(rtct)) with an excess of Et(3)B affords syn dinuclear boron complex 4, while a similar treatment of rctt and rcct isomers 2(rctt) and 2(rcct) yields anti dinuclear complexes 5 and 6, respectively.

12.
J Org Chem ; 72(22): 8327-31, 2007 Oct 26.
Article in English | MEDLINE | ID: mdl-17900142

ABSTRACT

The conformational behaviors of all four stereoisomers [5(rctt), 5(rcct), 5(rtct), and 5(rccc)] of tetra-O-methylsulfinylcalix[4]arene were studied by the 1H NMR spectroscopic method. Variable-temperature (VT) NMR experiments of 5(rctt), 5(rcct), and 5(rtct) revealed that each compound adopted the same conformation as that in the crystals at low temperatures and exhibited a self-exchange between the two equivalent species of this conformation at elevated temperatures. The values of the activation enthalpy DeltaH for the self-exchange were similar (approximately 70 kJ mol-1). Further, the activation entropy DeltaS++ was more important for 5(rtct) (-40 J mol-1 K-1) than for 5(rctt) (-5 J mol-1 K-1) and 5(rcct) (-7 J mol-1 K-1); consequently, the exchange rate of 5(rtct) was 150-180 times less than that of the other isomers at 273 K. On the other hand, 5(rccc) was in an equilibrium state between cone and partial-cone conformers at 253 K with the molar ratio being 85:15, which was in reasonable agreement with the relative stability between the two conformers calculated by the ab initio molecular orbital method.


Subject(s)
Calixarenes/chemistry , Sulfur Compounds/chemistry , Crystallography, X-Ray , Magnetic Resonance Spectroscopy/methods , Molecular Conformation , Oxidation-Reduction
13.
Chem Rev ; 106(12): 5291-316, 2006 Dec.
Article in English | MEDLINE | ID: mdl-17165689
14.
Chem Pharm Bull (Tokyo) ; 53(1): 90-4, 2005 Jan.
Article in English | MEDLINE | ID: mdl-15635237

ABSTRACT

The binding properties of dipeptides possessing aromatic residues towards quaternary ammonium ions have been investigated by 1H-NMR spectroscopy. The intermolecular hydrogen bonding between exchangeable protons (OH and NH) of aromatic residues of dipeptides and the counter anion of ammonium ion is the primary force. After the formation of the intermolecular hydrogen bonding, two aromatic residues of dipeptides can provide pi-base cavity to interact with the quaternary ammonium moiety.


Subject(s)
Allosteric Regulation/physiology , Dipeptides/chemistry , Dipeptides/metabolism , Quaternary Ammonium Compounds/chemistry , Quaternary Ammonium Compounds/metabolism , Anions , Dipeptides/analysis , Drug Interactions/physiology , Hydrogen Bonding , Quaternary Ammonium Compounds/analysis
15.
Org Biomol Chem ; 2(6): 890-8, 2004 Mar 21.
Article in English | MEDLINE | ID: mdl-15007419

ABSTRACT

Treatment of p-tert-butylcalix[4]arene (C1) and its sulfur-bridged analog T1 with 1,3-dichloro-1,1,3,3-tetraisopropyldisiloxane in the presence of imidazole gives proximally O,O'-disiloxane-1,3-diyl-bridged calixarenes C2 and T2 in excellent yields, respectively. Subsequent base-catalyzed etherification of the remaining hydroxy groups with alkyl halides gives syn- and anti-O'',O'''-dialkylated products, the stereoselectivity of which varies depending on the nature of the macrocycle, as well as the metal cation of the base employed. Thus, conventional calixarene C2 preferentially affords syn compounds of 1,2-alternate conformation (C3) with the aid of tert-BuOK and K(2)CO(3) and anti counterparts of partial-cone conformation (C4) with Cs(2)CO(3). On the other hand, thiacalixarene T2 affords syn compounds of 1,2-alternate conformation (T3) with any of the bases. The disiloxanediyl bridge of the resulting products can readily be removed by treatment with tetrabutylammonium fluoride. Thus, the net process provides an efficient method for the regio- and stereoselective synthesis of proximally dialkylated calix[4]arenes.

16.
J Org Chem ; 68(6): 2099-108, 2003 Mar 21.
Article in English | MEDLINE | ID: mdl-12636367

ABSTRACT

A naturally occurring 1,1'-biphenanthrene, blestriarene C (1), was prepared in 13 steps and 30% overall yield. The key steps are the ester-mediated nucleophilic aromatic substitution on 2,6-di-tert-butyl-4-methoxyphenyl 5-isopropoxy-2-methoxybenzoate (4) by 2-methoxy-4-methoxymethoxy-6-methylphenylmagnesium bromide (5) and a novel intramolecular cyclization of the resulting 4-isopropoxy-2'-methoxy-4'-methoxymethoxy-6'-methylbiphenyl-2-carboxylic ester 14 to 7-isopropoxy-4-methoxy-2-(methoxymethoxy)phenanthren-9-ol (15). The racemic blestriarene C was optically resolved by chiral HPLC on a preparative scale to give several 10-mg yields of both the enantiomers in up to 95% ee. The absolute stereochemistry was determined to be S(a)-(-) by the axial chirality recognition method, which was based on the stereospecific formation of a 12-membered cyclic diester containing two biaryl-o,o'-diyl unites joined by ester -CO(2)- linkages. The validity of the method was confirmed by an X-ray crystallographic analysis and ab initio conformational analyses of such 12-membered cyclic diesters. It was found that blestriarene C and its 7,7'-diisopropyl ether 2 underwent rapid photoracemization even under ambient light exposure.


Subject(s)
Phenanthrenes , Phenanthrenes/chemistry , Stilbenes , Chromatography, High Pressure Liquid , Crystallography, X-Ray , Molecular Conformation , Molecular Structure , Nuclear Magnetic Resonance, Biomolecular , Phenanthrenes/analysis , Phenanthrenes/chemical synthesis , Stereoisomerism
17.
J Org Chem ; 68(6): 2324-33, 2003 Mar 21.
Article in English | MEDLINE | ID: mdl-12636398

ABSTRACT

All four stereoisomers of p-tert-butylsulfinylcalix[4]arene [4(rccc), 4(rcct), 4(rctt), and 4(rtct)], arising from the disposition of the four sulfinyl groups with respect to the mean plane of the four bridging sulfur atoms, have been prepared via oxidation of p-tert-butylthiacalix[4]arene (2) or its tetra-O-benzyl ethers 5 of defined conformations. Thus, treatment of 2 with 4.4 molar equiv of NaBO(3).4H(2)O gave the rtct and rctt isomers in 27% and 17% yields, respectively, while oxidation of cone 5 (5(C)) and partial cone 5 (5(PC)) proceeded stereoselectively to give, after debenzylation of the resulting tetrasulfoxides 12 and 15, the rccc and rcct isomers in 56% and 28% yields, respectively, based on 5. The sulfinylcalix[4]arenes 4 were treated with iodomethane in the presence of a base to give the corresponding tetramethyl ethers 16, the structures of which in regard to the disposition of the sulfinyl groups and the conformation of the phenol units were determined by X-ray crystallography. Also reported is the synthesis of all four conformational isomers of tetra-O-benzyl ether of 2 (5(C), 5(PC), 5(1,2-A), and 5(1,3-A)).

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