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2.
Bioorg Khim ; 37(4): 496-503, 2011.
Article in Russian | MEDLINE | ID: mdl-22096992

ABSTRACT

Currently, a range of biologically active molecules have been attached to plant and bacterial viras nanoscaffolds, yielding stable nanoparticles that display multiple copies of the desired molecule. In this paper we propose a new method of non-covalent attachment of peptides to the surface of virios. We have demonstrated that this method is efficient in a model system that includes tobacco mosaic virus particles, synthetic polycation (quaternized poly(4-vinylpyridine) carrying ethyl ethyl pendant radicals) and polypeptide of interest. This principle of step-by-step binding to the surface of virions was used for electrostatic association with hydrophilic fragment of influenza virus haemagglutinin.


Subject(s)
Immobilized Proteins/chemistry , Nanoparticles/chemistry , Orthomyxoviridae/chemistry , Virion/chemistry , Amino Acid Sequence , Animals , Hemagglutinins/chemistry , Hemagglutinins/immunology , Humans , Mice , Molecular Sequence Data , Orthomyxoviridae/immunology , Polyamines/chemical synthesis , Polyelectrolytes , Polyvinyls/chemistry , Pyridinium Compounds/chemistry , Tobacco Mosaic Virus/chemistry
3.
Mol Biol (Mosk) ; 39(5): 896-904, 2005.
Article in Russian | MEDLINE | ID: mdl-16240723

ABSTRACT

Viruses of genus Carlavirus encode a small cysteine-rich protein (CRP) of unknown function. To investigate the role of CRP of carlavirus chrysanthemum virus B (CVB), a recombinant potato virus X (PVX) genome was constructed, which carried the CVB CRP gene. Expression of CVB CRP in the PVX genetic background drastically changed the PVX symptom phenotype in N. benthamiana. Instead of symptomless infection and mild mosaic, which are characteristic of PVX in this plant host, the recombinant virus expressing CVB CRP induced formation of necrotic local lesions on inoculated leaves and necrosis of the apical leaves. In N. tabacum, the infection pattern depended on the host genotype: the recombinant PVX was able to spread systemically only in N gene-carrying plants. In agroinfiltration-mediated transient expression assay, CVB CRP did not exhibit the properties of avirulence factor in N. benthamiana and was unable to suppress post-transcriptional gene silencing. Thus, CVB CRP is the viral pathogenicity determinant controlling the virus interaction with plant hosts in a manner which depends on plant defense mediated by resistance genes such as the N gene.


Subject(s)
Carlavirus/pathogenicity , Gene Silencing , Nicotiana/virology , Plant Diseases/virology , Viral Proteins/metabolism , Carlavirus/genetics , Cysteine/chemistry , Genes, Viral , Genome, Viral , Plants, Genetically Modified , Potexvirus/genetics , Nicotiana/immunology , Viral Proteins/chemistry
4.
Mol Biol (Mosk) ; 37(6): 1080-8, 2003.
Article in Russian | MEDLINE | ID: mdl-14714504

ABSTRACT

A study was made of the in vitro interactions of virions and the coat protein (CP) of the potato virus X (PVX) with microtubules (MT). Both virions and CP cosedimented with taxol-stabilized MT. In the presence of PVX CP, tubulin polymerized to produce structures resistant to chilling. Electron microscopy revealed the aberrant character of the resulting tubulin polymers (protofilaments and their sheets), which differed from MT assembled in the presence of cell MAP2. In contrast, PVX virions induced the assembly of morphologically normal MT sensitive to chilling. Virions were shown to compete with MAP2 for MT binding, suggesting an overlap for the MT sites interacting with MAP2 and with PVX virions. It was assumed that PVX virions interact with MT in vivo and that, consequently, cytoskeleton elements participate in intracellular compartmentalization of the PVX genome.


Subject(s)
Biopolymers/metabolism , Microtubules/metabolism , Potexvirus/metabolism , Tubulin/metabolism , Viral Envelope Proteins/metabolism , Virion/metabolism , Animals , Cattle
11.
Bioorg Khim ; 18(12): 1487-95, 1992 Dec.
Article in Russian | MEDLINE | ID: mdl-1301001

ABSTRACT

The full-length genomic DNA of a small plant virus--coconut foliar decay virus (CFDV)--has been synthesized by a combination of chemical synthesis, ligation and polymerase chain reaction. Three separately cloned DNA fragments of the genomic DNA were sequenced and assembled in the pPCV002 plasmid vector.


Subject(s)
DNA, Viral/metabolism , Enzymes/metabolism , Genome, Viral , Plant Viruses/metabolism , Base Sequence , Cloning, Molecular , Molecular Sequence Data , Plasmids
13.
Mol Biol (Mosk) ; 26(1): 59-69, 1992.
Article in Russian | MEDLINE | ID: mdl-1324402

ABSTRACT

DNA-peroxidase probes were synthesized according to a modified method (Renzetal) for the detection of lambda phage DNA (model system), polio, potato X and M, tobacco mosaic viral RNAs by spot hybridization onto nitrocellulose membranes. cDNAs (300-1400 bases) complementary to the viral RNAs were cloned in M13 phage DNA or pTZ19. Efficacy of each step of the probe construction and the diagnostic procedure were thoroughly examined. Peroxidase activity manifested with non-toxic stain (NTS) was 3-5 fold more sensitive in comparison with alpha-Cl-naphthol or bisanisidine. It was found that HRP became much more stable to heat in diluted samples and was 2-3 fold more active after coupling with polyethylene imine spacer. Also, sodium borohydride reduction of the cDNA and PEI-HRP adduct crosslinked by the glutardialdehyde resulted in the stabilization of the probes. Target nucleic acids or diagnostic samples were efficiently fixed onto nitrocellulose membranes by a short-time UV irradiation. Diagnostics of cellular extracts with the preliminary prepared probes takes 4-5 hours due to express hybridization (1 hr) with 100-200 ng/ml of specific nucleotide sequence. Up to 20 pg (less than 10(-17) M) of the purified viral nucleic acids and 30-50 pg of them in the total fraction of the cellular nucleic acids isolated from the infected cells were identified with the probes. 50-10000 fold diluted lysate of the HeLa cells infected with poliovirus (PV1) and both crude extracts of potato tuber or potato and tobacco leaf tissues infected with PVX, PVM or TMV displayed specific signals with the respective DNA-HRP probes.


Subject(s)
DNA Probes , Horseradish Peroxidase , Plant Viruses/metabolism , Poliovirus/metabolism , Virus Diseases/diagnosis , DNA , DNA, Viral/analysis , HeLa Cells , Humans , Nucleic Acid Hybridization , RNA, Viral/analysis
14.
Mol Biol (Mosk) ; 24(2): 448-59, 1990.
Article in Russian | MEDLINE | ID: mdl-2362590

ABSTRACT

The sequence of 2630 3'-terminal nucleotides has been determined for the genomic RNA of potato virus M (PVM), a type member of the carlavirus group. Analysis of this nucleotide sequence revealed five open reading frames coding for proteins of mol. wt. 25, 12, 7, 34 and 11 kDa (in 5'----3' direction). The PVM genome organization has been shown to be basically analogous to that of potexviruses, except that the latter at their 3' end lack the gene encoding 11K protein. Amino acid sequence comparison between the PVM 34K protein and the coat proteins of potexviruses has shown a high extent of homology in the C-terminal amino acids. Homology has also been found between the 25, 12 and 7K proteins encoded by PVM RNA and corresponding potexvirus proteins. All this gave grounds for suggestion that carlaviruses and potexviruses belong to the same subgroup of phytoviruses.


Subject(s)
Genes, Viral , Plant Viruses/genetics , RNA, Viral/genetics , Amino Acid Sequence , Base Sequence , Capsid/genetics , Cloning, Molecular , DNA/genetics , Molecular Sequence Data , Solanum tuberosum/microbiology
17.
Mol Gen Mikrobiol Virusol ; (3): 32-8, 1987 Mar.
Article in Russian | MEDLINE | ID: mdl-3033484

ABSTRACT

DNA copies of the potato virus X (PVX) RNA corresponding to 2300 nucleotides at the 3'-end have been cloned. The cloned cDNA copies containing the nucleotides 445-1280 from the 3'-end have been sequenced. The 5'-terminal region of the PVX coat protein gene corresponds to residues 445-786 from the 3'-end. The amino acid sequences of two more open reading frames (ORF) have been deduced from the nucleotide sequence. The potential translation products of these ORF's would correspond to the nonstructural viral proteins. We have located the ORF1 within the region of residues 799-1009 preceding the coat protein cistron. The tentative protein is composed of 70 amino acids and has an aminoterminal segment which is markedly hydrophobic. ORF2 in the PVX sequence ends with UAG at nucleotides 942-944 and extends to the 5'-terminus for additional 340 nucleotides. The distant sequence homology exists between a carboxyterminal portion of PVX ORF2 and that of the nonstructural "30 K-proteins" of the plant tobamoviruses.


Subject(s)
Genes, Viral , Genes , Plant Viruses/genetics , Solanum tuberosum/microbiology , Viral Envelope Proteins/analysis , Base Sequence , DNA/genetics , DNA Restriction Enzymes , RNA Caps/analysis , RNA Caps/genetics
18.
Article in Russian | MEDLINE | ID: mdl-4063407

ABSTRACT

The data given testify that picornavirus RNA-dependent RNA-polymerase, RNA-polymerase encoded by the genome of MS2 phage and the certain polypeptides involved in the replication of RNA genomes of alphaviruses, tobamoviruses and tricornaviruses include the homologous stretches of the amino acids. The common sequences are located in the COOH-terminal regions of the viral proteins. These sequences have been found to be conserved also in RNA-replicase MS2 phage. The similarity of the primary structure between the RNA-polymerase phages and proteins of eucaryotic plus-RNA-containing viruses testifies in favour of the hypothesis on possible ancestral relationship of virus RNA-polymerases genes. These data point out that it is possible to localize an indispensable functional domain conserved upon evolutionary divergence of an ancestral RNA-polymerase gene. Such conservative region is recently found in the composition of RNA-dependent DNA-polymerases animals and plants virus. An attention is drawn to the region of protein similarity between conservative domains of viral RNA-dependent DNA-polymerases and RNA-polymerases.


Subject(s)
Bacteriophages/genetics , DNA-Directed RNA Polymerases/genetics , Genes, Viral , Plant Viruses/genetics , RNA Viruses/genetics , Amino Acid Sequence , Animals , Bacteriophages/enzymology , Biological Evolution , Plant Viruses/enzymology , RNA Viruses/enzymology , Sequence Homology, Nucleic Acid , Viral Proteins/genetics
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