Metal-organic frameworks for the capture of α-pinene traces.

A dual computational/experimental approach enabled ranking of the performance of a series of MOFs for α-pinene capture in terms of affinity and uptake. UiO-66(Zr) is demonstrated to be a good candidate for adsorbing α-pinene at sub-ppm levels, while MIL-125(Ti)-NH2 shows ideal performances for abating α-pinene at concentrations encountered in indoor air.

Cyclooxygenases and lipoxygenases are used by the fungus Podospora anserina to repel nematodes.

Oxylipins are secondary messengers used universally in the living world for communication and defense. The paradigm is that they are produced enzymatically for the eicosanoids and non-enzymatically for the isoprostanoids. They are supposed to be degraded into volatile organic compounds (VOCs) and to participate in aroma production. Some such chemicals composed of eight carbons are also envisoned as alternatives to fossil fuels. In fungi, oxylipins have been mostly studied in Aspergilli and shown to be involved in signalling asexual versus sexual development, mycotoxin production and interaction with the host for pathogenic species. Through targeted gene deletions of genes encoding oxylipin-producing enzymes and chemical analysis of oxylipins and volatile organic compounds, we show that in the distantly-related ascomycete Podospora anserina, isoprostanoids are likely produced enzymatically. We show the disappearance in the mutants lacking lipoxygenases and cyclooxygenases of the production of 10-hydroxy-octadecadienoic acid and that of 1-octen-3-ol, a common volatile compound. Importantly, this was correlated with the inability of the mutants to repel nematodes as efficiently as the wild type. Overall, our data show that in this fungus, oxylipins are not involved in signalling development but may rather be used directly or as precursors in the production of odors against potential agressors. SIGNIFICANCE: We analyzse the role in inter-kingdom communication of lipoxygenase (lox) and cyclooxygenase (cox) genes in the model fungus Podospora anserina. Through chemical analysis we define the oxylipins and volatile organic compounds (VOCs)produce by wild type and mutants for cox and lox genes, We show that the COX and LOX genes are required for the production of some eight carbon VOCs. We show that COX and LOX genes are involved in the production of chemicals repelling nematodes. This role is very different from the ones previously evidenced in other fungi.

A new approach to detect early or hidden fungal development in indoor environments.

In addition to the biodegradation problems encountered in buildings, exposure of their occupants to mold is responsible for numerous diseases such as respiratory infections, immediate or delayed allergies and different types of irritations. However, current techniques are unable to detect mold at an early stage of development or hidden contaminants. Moularat et al., in 2008 has established chemical fingerprints of moldy growth from Volatile Organic Compounds (VOCs) arising specifically from fungal metabolism and developed the Fungal Contamination Index (FCI) (Moularat et al., 2008a,b). This index has the advantage of detecting fungal development both reliably and rapidly before any visible signs of contamination could be detected. However, even though the FCI has been widely tested, VOCs' analysis by GC/MS, which is required for index calculation, is incompatible with real-time monitoring strategy for indoor environments. In this context, researches around FCI exploitation have been followed up in order to provide a monitoring device widely deployable which is the result of the miniaturization of an analytical chain for portable, reliable and low-cost applications. This device is based on one hand the selection and concentration of chemical compounds from the sample of interest and on the other hand the development of an array of different conducting polymer based sensors in order to obtain a specific footprint. This fungal contamination detection device was the subject of patent applications by the CSTB. The modularity of the system (ability to vary both the elements of detection polymers and retention time of interest) allows for expansion of its use to other pollutants.

'Core species' in three sources of indoor air belonging to the human micro-environment to the exclusion of outdoor air.

Although we spend the majority of our lives indoors, the airborne microbial content of enclosed spaces still remains inadequately described. The objective of this study was to characterize the bacterial diversity of indoor air in three different enclosed spaces with three levels of occupancy, and, in particular, to highlight the 'core' species, the opportunistic pathogens and their origins. Our findings provide an overall description of bacterial diversity in these indoor environments. Data gathered from the three enclosed spaces revealed the presence of a common indoor signature (60% of total sequences in common). This work will provide a clearer understanding of the dominant groups of bacteria encountered in enclosed spaces: Actinobacteria, Proteobacteria, Firmicutes and Bacteroidetes. Thus, certain evidence revealed a connection between 'core' species and the human micro-environment (20% of phylotypes and 12% of sequences of human origin). Overall PCA analysis showed that the indoor environment is influenced mainly by the microbial diversity from nose and skin. Among the 'core species' found during this study, a large number (72% of all pathogen-related sequences were concentrated in 'core species') of genera and species are known to be responsible for opportunistic or nosocomial diseases or to include human commensal bacteria such as Mycobacterium sp., Acinetobacter baumanii, Aerococcus viridians, Thermoactinomyces vulgaris or Clostridium perfringens.

Airborne fungal volatile organic compounds in rural and urban dwellings: detection of mould contamination in 94 homes determined by visual inspection and airborne fungal volatile organic compounds method.

Moulds can both degrade the materials and structures they colonise and contribute to the appearance of symptoms and diseases in the inhabitants of contaminated dwellings. Only few data have compared the levels of contamination in urban and rural environments and the results are not consistent. The aim of this study was to use a fungal contamination index, based on the detection of specific Microbial Volatile Organic Compounds (MVOC), to determine the exposure to moulds of individuals living in urban and rural dwellings. For this purpose, 94 dwellings (47 in an urban setting in Clermont-Ferrand and 47 in rural areas of the Auvergne region, France) were studied. By demonstrating marked disparities between the proportion of visible contamination (19%) and that of active, visible and/or hidden contamination (59%) and the fact that almost all visible contamination was identified by MVOC, we were able to show that use of the index seemed relevant to confirm the actual presence of fungal contamination in a dwelling. Furthermore, it was possible to demonstrate a relationship between moulds and the presence of water on surfaces (condensation, infiltrations, water damage, etc.). A higher proportion of positive fungal contamination index in rural homes was observed compared to the proportion in urban ones (68% versus 49%; p<0.05).

Detection of fungal development in a closed environment through the identification of specific VOC: demonstration of a specific VOC fingerprint for fungal development.

The occurrence of disease amongst the occupants of "mouldy" environments has been widely described in the literature. However, the detection of such moulds in closed environments remains difficult, particularly in the event of recent (before the first deterioration) or masked contamination (behind a material). In this context, the present study aimed to determine a specific chemical fingerprint for fungal development detectable in closed environments (dwellings, office, museum...). To achieve this, chemical emissions from sterile and artificially contaminated by moulds materials were analyzed and compared using a descriptive statistical method. Principal Component Analysis is thus chosen to analyze the results. PCA generated optimum and similar graphical representations of the scatterplot representing the data matrix. This statistical approach made it possible to identify an emission fingerprint without applying any preconception as to the type of emitted compound. Statistical analysis of the data then enabled confirmation of the impact of moulds on total VOC emissions. This emission of specific compounds resulted in obtaining a signature for the presence of fungal development in an environment, defined by specific ions. This analysis, and use of these ions applied to dwellings, made it possible to distinguish those with proven fungal development from those with no sign of mould or with a context favorable to fungal development, thus demonstrating that a chemical fingerprint specific to fungal development could be detected in indoor environments.

Detection of fungal development in closed spaces through the determination of specific chemical targets.

In addition to the biodegradation problems encountered in buildings, exposure of their occupants to moulds is responsible for numerous diseases: infections (invasive nosocomial aspergillosis), immediate or delayed allergies, food-borne infections and different types of irritation. In this context, the aim of our work has been to determine specific chemical tracers for fungal development on construction materials. More generally, by detecting a specific chemical fingerprint of fungal development, our objective was to propose a microbiological alert system which could control systems and/or procedures for the microbiological treatment of indoor areas. We therefore characterized the chemical emissions from six types of construction material contaminated artificially by moulds. Chemical fingerprints were established for 19 compounds arising specifically from fungal metabolism: 2-ethylhexanoic acid methyl ester, 1-octen-3-ol, 3-heptanol, 3-methyl-1-butanol, 2-methyl-1-butanol, 1,3-octadiene, 2-(5H)-furanone, 2-heptene, alpha-pinene, 2-methylisoborneol, 4-heptanone, 2-methylfuran, 3-methylfuran, dimethyldisulfide, methoxybenzene, a terpenoid and three sesquiterpenes. Determining the origin of these compounds and their specific links with a growth substrate or fungal species made it possible to judge the pertinence of choosing these compounds as tracers. Thus the detecting specific volatile organic compounds emitted as from the second day of fungal growth demonstrated that this approach had the advantage of detecting fungal development both reliably and rapidly before any visible signs of contamination could be detected.

Impact of Health on Particle Size of Exhaled Respiratory Aerosols: Case-control Study.

Individuals with viral infection could possibly emit an infectious aerosol. The distinction between exhaled breaths of infected and healthy individuals should facilitate an understanding of the airborne transmission of infections. In this context, the present study is aimed at distinguishing healthy individuals from symptomatic ones by the study of their exhaled breath. A setup composed of a modified hood connected to an electrical low pressure impactor, which allows for the study of a wide range of particle sizes (from 7 nm to 10 µm), has been developed in order to collect exhaled breaths. This setup has been used with seventy eight volunteers. The results obtained using Principal Component Analysis (PCA) showed that exhaled breaths of individuals without symptoms have statistical similarities and are different from those of individuals with symptoms. This separation was made by the greater proportional emission by individuals with symptoms of particles collected on stages 3 (D 50 = 0.09 µm), 6 (D 50 = 0.38 µm), 8 (D 50 = 0.95 µm), 10 (D 50 = 2.40 µm), and 12 (D 50 = 4.02 µm) of the impactor. There was not a specific size distribution obtained for the individuals with symptoms. As a consequence, further research on the exhaled breath should be undertaken with symptomatic volunteers and would require the analysis of this wide range of particle sizes.

Characterisation of exposure to airborne fungi: measurement of ergosterol.

In order to gain a clearer understanding of the level of fungal air contamination in indoor environments, we have adapted and tested a method to evaluate fungal biomass. Liquid phase chromatography (HPLC) of ergosterol, a component of the cell membrane of microscopic fungi, was employed. This method permits the detection and identification of ergosterol molecules at a concentration of 40 microg/ml (n=33, sigma=5). By combining this assay with a rotating cup collection apparatus, it was possible to measure fungal flora levels with a limit of quantification of 0.4 ng/m3 or a theoretical value of 150 spores per cubic meter (m3). Measurements of ergosterol levels performed on different sites showed that this method reflected the different situations of exposure of occupants to airborne fungal flora.