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Comput Math Methods Med ; 2018: 5490513, 2018.
Article in English | MEDLINE | ID: mdl-29666661

ABSTRACT

The selection of feature genes with high recognition ability from the gene expression profiles has gained great significance in biology. However, most of the existing methods have a high time complexity and poor classification performance. Motivated by this, an effective feature selection method, called supervised locally linear embedding and Spearman's rank correlation coefficient (SLLE-SC2), is proposed which is based on the concept of locally linear embedding and correlation coefficient algorithms. Supervised locally linear embedding takes into account class label information and improves the classification performance. Furthermore, Spearman's rank correlation coefficient is used to remove the coexpression genes. The experiment results obtained on four public tumor microarray datasets illustrate that our method is valid and feasible.


Subject(s)
Computational Biology , Gene Expression Profiling , Linear Models , Neoplasms/genetics , Oligonucleotide Array Sequence Analysis , Tissue Array Analysis , Algorithms , Bayes Theorem , Data Interpretation, Statistical , Databases, Genetic , False Positive Reactions , Humans , Reproducibility of Results , Software
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