Suspended sediment and sediment-associated contaminants in San Francisco Bay.

Water-quality managers desire information on the temporal and spatial variability of contaminant concentrations and the magnitudes of watershed and bed-sediment loads in San Francisco Bay. To help provide this information, the Regional Monitoring Program for Trace Substances in the San Francisco Estuary (RMP) takes advantage of the association of many contaminants with sediment particles by continuously measuring suspended-sediment concentration (SSC), which is an accurate, less costly, and more easily measured surrogate for several trace metals and organic contaminants. Continuous time series of SSC are collected at several sites in the Bay. Although semidiurnal and diurnal tidal fluctuations are present, most of the variability of SSC occurs at fortnightly, monthly, and semiannual tidal time scales. A seasonal cycle of sediment inflow, wind-wave resuspension, and winnowing of fine sediment also is observed. SSC and, thus, sediment-associated contaminants tend to be greater in shallower water, at the landward ends of the Bay, and in several localized estuarine turbidity maxima. Although understanding of sediment transport has improved in the first 10 years of the RMP, determining a simple mass budget of sediment or associated contaminants is confounded by uncertainties regarding sediment flux at boundaries, change in bed-sediment storage, and appropriate modeling techniques. Nevertheless, management of sediment-associated contaminants has improved greatly. Better understanding of sediment and sediment-associated contaminants in the Bay is of great interest to evaluate the value of control actions taken and the need for additional controls.

The slow recovery of San Francisco Bay from the legacy of organochlorine pesticides.

The use of organochlorine pesticides, including DDTs, chlordanes, and dieldrin, peaked in San Francisco Bay's watershed 30-40 years ago, yet residues of the pesticides remain high. Known as legacy pesticides for their persistence in the Bay decades after their uses ended, the compounds and their breakdown products occur at concentrations high enough to contribute to advisories against the consumption of sport fish from the Bay. Combined with other data sets, the long-term monitoring data collected by the San Francisco Estuary Regional Monitoring Program (RMP) for trace substances allow us to track recovery of the Bay from these inputs and predict its future improvement. Legacy pesticides enter the water and sediment of San Francisco Bay from a variety of sources, including runoff from California's Central Valley and local watersheds, municipal and industrial wastewater, atmospheric deposition, erosion of historically contaminated sediment deposits, and dredging and disposal of dredged material. Runoff from small-urbanized tributaries may contribute as much or more to the loads than runoff from the agricultural Central Valley, even though 90 percent of the freshwater flow comes from the Central Valley via the Sacramento and San Joaquin rivers. The fates of legacy pesticides in San Francisco Bay are controlled by their chemical properties, including their solubilities and partition coefficients. Degradation in the sediments, outflow through the Golden Gate, and volatilization-in that relative order-result in removal of pesticides from the Bay. A contaminant fate model was used to estimate recovery times of the Bay under various scenarios. For example, under a scenario in which no new legacy pesticides entered the Bay, model predictions suggested that concentrations of pesticides in the water and the active sediment layer would reach risk-reduction goals within one to three decades. Under scenarios of continued inputs to the Bay, recovery time would be considerably longer or not reached at all. Long-term tissue monitoring corroborates model predictions of slow declines in DDT and chlordane concentrations. Field-transplanted bivalve samples indicate declines since 1980, and lipid-weight concentrations of pesticides have declined in fishes, but the declines are slow. The critical management question for the Bay is whether there are feasible management actions that would decrease concentrations in sport fish significantly faster than the existing slow progress that has been observed.

Polycyclic aromatic hydrocarbon (PAH) contamination in San Francisco Bay: a 10-year retrospective of monitoring in an urbanized estuary.

Polycyclic aromatic hydrocarbons (PAH) are widespread contaminants in the San Francisco Bay. Several exceedances of water quality criteria raise the possibility that PAH may be impacting aquatic biota. The Regional Monitoring Program for Water Quality in the San Francisco Estuary (RMP) has collected annual monitoring data on PAH in the Bay since 1993. Analysis of Bay water, sediment, and mussel SigmaPAH concentration data showed that there were very few significant (P < 0.05) increasing or decreasing temporal trends in SigmaPAH concentrations in the Bay during the period of 1993-2001. Wet and dry season input of PAH did not show any major influence on water SigmaPAH concentrations over the same period. Based on their relative contribution to the estimated total maximum PAH loading (10,700 kg/yr) into the Bay, the PAH loading pathways are ranked as storm water runoff ( approximately 51%) >tributary inflow ( approximately 28%) >wastewater treatment plant effluent ( approximately 10%) >atmospheric deposition ( approximately 8%) >dredged material disposal ( approximately 2%). The PAH sediment quality threshold of 1000 ng/g, which has been previously suggested by NOAA to protect estuarine fish such as English sole against adverse health effects, was frequently exceeded at individual monitoring stations (11 of the 26 stations exceeded the threshold over 50% of the time). Modeling results have shown that the predominant loss pathway for PAH is degradation in sediments, and unless external loading levels of PAH are controlled, the Bay is not expected to recover rapidly.

Effective application of monitoring information: the case of San Francisco Bay.

The San Francisco Estuary Regional Monitoring Program (RMP) for Trace Substances is an innovative partnership among a regulatory agency, more than 70 regulated entities, and an independent scientific organization. The institutional arrangement behind the RMP has made the regulatory system increasingly responsive to emerging management needs, particularly with regard to the development of total maximum daily loads and ecosystem impairment assessment. Through multiagency partnerships within and outside the RMP institutional structure, major information gaps for several pollutants of concern have been narrowed, resulting in a successful consensus-based regulatory approach to managing copper and nickel mass inputs into the Estuary. Short-term research efforts, based upon monitoring results, helped identify the most cost-effective control and remediation options for various bioaccumulative substances. Additionally, adaptive changes to the monitoring program documented the existence of widespread aquatic toxicity in the Estuary that is apparently due to pesticide runoff from agricultural and urban areas. One of the most important contributions of this collaborative monitoring program is the deliberate and systematic adjustment of management and research questions that serve to influence and add relevance to the overall research agenda related to San Francisco Estuary ecosystem assessment.