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1.
J Lipid Res ; 56(6): 1172-81, 2015 Jun.
Article in English | MEDLINE | ID: mdl-25910941

ABSTRACT

HDL is typically isolated ultracentrifugally at 40,000 rpm or greater, however, such high centrifugal forces are responsible for altering the recovered HDL particle. We demonstrate that this damage to HDL begins at approximately 30,000 rpm and the magnitude of loss increases in a rotor speed-dependent manner. The HDL is affected by elevated ultracentrifugal fields resulting in a lower particle density due to the shedding of associated proteins. To circumvent the alteration of the recovered HDL, we utilize a KBr-containing density gradient and a lowered rotor speed of 15,000 rpm to separate the lipoproteins using a single 96 h centrifugation step. This recovers the HDL at two density ranges; the bulk of the material has a density of about 1.115 g/ml, while lessor amounts of material are recovered at >1.2 g/ml. Thus, demonstrating the isolation of intact HDL is possible utilizing lower centrifuge rotor speeds.


Subject(s)
Centrifugation, Density Gradient/methods , Lipoproteins, HDL/isolation & purification , Ultracentrifugation/methods , Centrifugation, Density Gradient/instrumentation , Humans , Kinetics , Lipoproteins, HDL/chemistry
2.
J Biol Inorg Chem ; 10(8): 913-23, 2005 Dec.
Article in English | MEDLINE | ID: mdl-16283393

ABSTRACT

Yeasts lacking copper-zinc superoxide dismutase (sod1Delta) exhibit a broad range of phenotypes, many of which can be rescued by growth in the presence of high levels of ionic manganese. We undertook a comprehensive survey of the effects of manganese on wild-type and sod1Delta yeasts and found that 5 mM Mn2+ rescued all known growth-related phenotypes, such as slow growth in air, temperature sensitivity, specific amino acid auxotrophies, no growth in high oxygen, poor growth in nonfermentable carbon sources, and decreased stationary-phase survival. Iron-related phenotypes-elevated electron paramagnetic resonance detectable ("free") iron, decreased aconitase activity, and fragmenting vacuoles-as well as zinc sensitivity were also rescued. The activity of manganese superoxide dismutase remained constant or was reduced when the yeasts were grown in the presence of MnCl2, indicating that induction of this alternative superoxide dismutase is not the explanation. In contrast to MnCl2 treatment, addition of two manganese-containing superoxide dismutase mimetic compounds to the growth medium did not provide any rescue of sod1Delta yeast growth but rather had an sod1Delta-selective inhibitory effect at micromolar concentrations. Mechanisms by which ionic manganese can effect this rescue, while the mimetic compounds do not, are discussed.


Subject(s)
Manganese/pharmacology , Oxygen/antagonists & inhibitors , Saccharomyces cerevisiae/drug effects , Superoxide Dismutase/metabolism , Electron Spin Resonance Spectroscopy , Gene Deletion , Iron/analysis , Iron/metabolism , Manganese/metabolism , Oxygen/toxicity , Phenotype , Saccharomyces cerevisiae/enzymology , Saccharomyces cerevisiae/genetics , Saccharomyces cerevisiae Proteins/genetics , Saccharomyces cerevisiae Proteins/metabolism , Superoxide Dismutase/genetics , Temperature , Vacuoles/metabolism , Zinc/metabolism , Zinc/pharmacology
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