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1.
Eur J Med Chem ; 259: 115674, 2023 Nov 05.
Article in English | MEDLINE | ID: mdl-37536209

ABSTRACT

Neutral sphingomyelinase 2 (nSMase2) has gained increasing attention as a therapeutic target to regulate ceramide production in various disease conditions. Phenyl (R)-(1-(3-(3,4-dimethoxyphenyl)-2,6-dimethylimidazo[1,2-b]pyridazin-8-yl)-pyrrolidin-3-yl)carbamate (PDDC) is a submicromolar nSMase2 inhibitor and has been widely used to study the pharmacological effects of nSMase2 inhibition. Through screening of compounds containing a bicyclic 5-6 fused ring, larotrectinib containing a pyrazolo[1,5-a]pyrimidine ring was identified as a low micromolar inhibitor of nSMase2. This prompted us to investigate the pyrazolo[1,5-a]pyrimidin-3-amine ring as a novel scaffold to replace the imidazo[1,2-b]pyridazine-8-amine ring of PDDC. A series of molecules containing a pyrazolo[1,5-a]pyrimidin-3-amine ring were synthesized and tested for their ability to inhibit human nSMase2. Several compounds exhibited nSMase2 inhibitory potency superior to that of PDDC. Among these, N,N-dimethyl-5-morpholinopyrazolo[1,5-a]pyrimidin-3-amine (11j) was found to be metabolically stable in liver microsomes and orally available with a favorable brain-to-plasma ratio, demonstrating the potential of pyrazolo[1,5-a]pyrimidine ring as an effective scaffold for nSMase2 inhibition.


Subject(s)
Amines , Sphingomyelin Phosphodiesterase , Humans , Pyrimidines/pharmacology , Ceramides
2.
Angew Chem Int Ed Engl ; 62(2): e202213563, 2023 01 09.
Article in English | MEDLINE | ID: mdl-36346622

ABSTRACT

Increasing the speed, specificity, sensitivity, and accessibility of mycobacteria detection tools are important challenges for tuberculosis (TB) research and diagnosis. In this regard, previously reported fluorogenic trehalose analogues have shown potential, but their green-emitting dyes may limit sensitivity and applications in complex settings. Here, we describe a trehalose-based fluorogenic probe featuring a molecular rotor turn-on fluorophore with bright far-red emission (RMR-Tre). RMR-Tre, which exploits the unique biosynthetic enzymes and environment of the mycobacterial outer membrane to achieve fluorescence activation, enables fast, no-wash, low-background fluorescence detection of live mycobacteria. Aided by the red-shifted molecular rotor fluorophore, RMR-Tre exhibited up to a 100-fold enhancement in M. tuberculosis labeling compared to existing fluorogenic trehalose probes. We show that RMR-Tre reports on M. tuberculosis drug resistance in a facile assay, demonstrating its potential as a TB diagnostic tool.


Subject(s)
Mycobacterium tuberculosis , Tuberculosis , Humans , Molecular Probes , Trehalose , Fluorescent Dyes
3.
ACS Chem Biol ; 17(1): 17-23, 2022 01 21.
Article in English | MEDLINE | ID: mdl-34904435

ABSTRACT

Macrodomains are a class of conserved ADP-ribosylhydrolases expressed by viruses of pandemic concern, including coronaviruses and alphaviruses. Viral macrodomains are critical for replication and virus-induced pathogenesis; therefore, these enzymes are a promising target for antiviral therapy. However, no potent or selective viral macrodomain inhibitors currently exist, in part due to the lack of a high-throughput assay for this class of enzymes. Here we developed a high-throughput ADP-ribosylhydrolase assay using the SARS-CoV-2 macrodomain Mac1. We performed a pilot screen that identified dasatinib and dihydralazine as ADP-ribosylhydrolase inhibitors. Importantly, dasatinib inhibits SARS-CoV-2 and MERS-CoV Mac1 but not the closest human homologue, MacroD2. Our study demonstrates the feasibility of identifying selective inhibitors based on ADP-ribosylhydrolase activity, paving the way for the screening of large compound libraries to identify improved macrodomain inhibitors and to explore their potential as antiviral therapies for SARS-CoV-2 and future viral threats.


Subject(s)
Antiviral Agents/pharmacology , High-Throughput Screening Assays/methods , N-Glycosyl Hydrolases/antagonists & inhibitors , SARS-CoV-2/drug effects , Dasatinib/pharmacology , Protein Domains , SARS-CoV-2/enzymology
4.
J Mol Biol ; 432(19): 5390-5410, 2020 09 04.
Article in English | MEDLINE | ID: mdl-32795535

ABSTRACT

Streptococcus pneumoniae (Spn) is an important Gram-positive human pathogen that causes millions of infections worldwide with an increasing occurrence of antibiotic resistance. Fe acquisition is a crucial virulence determinant in Spn; further, Spn relies on exogenous FeIII-siderophore scavenging to meet nutritional Fe needs. Recent studies suggest that the human catecholamine stress hormone, norepinephrine (NE), facilitates Fe acquisition in Spn under conditions of transferrin-mediated Fe starvation. Here we show that the solute binding lipoprotein PiuA from the piu Fe acquisition ABC transporter PiuBCDA, previously described as an Fe-hemin binding protein, binds tetradentate catechol FeIII complexes, including NE and the hydrolysis products of enterobactin. Two protein-derived ligands (H238, Y300) create a coordinately saturated FeIII complex, which parallel recent studies in the Gram-negative intestinal pathogen Campylobacter jejuni. Our in vitro studies using NMR spectroscopy and 54Fe LC-ICP-MS confirm the FeIII can move from transferrin to apo-PiuA in an NE-dependent manner. Structural analysis of PiuA FeIII-bis-catechol and GaIII-bis-catechol and GaIII-(NE)2 complexes by NMR spectroscopy reveals only localized structural perturbations in PiuA upon ligand binding, largely consistent with recent descriptions of other solute binding proteins of type II ABC transporters. We speculate that tetradentate FeIII complexes formed by mono- and bis-catechol species are important Fe sources in Gram-positive human pathogens, since PiuA functions in the same way as SstD from Staphylococcus aureus.


Subject(s)
Catechols/metabolism , Ferric Compounds/metabolism , Streptococcus pneumoniae/metabolism , Amino Acid Sequence , Catechols/chemistry , Crystallography, X-Ray , Ferric Compounds/chemistry , Humans , Models, Molecular , Nuclear Magnetic Resonance, Biomolecular , Pneumococcal Infections/metabolism , Pneumococcal Infections/microbiology , Protein Conformation , Streptococcus pneumoniae/chemistry
5.
Org Lett ; 21(7): 2200-2203, 2019 04 05.
Article in English | MEDLINE | ID: mdl-30855974

ABSTRACT

Lantibiotics are a class of peptide antibiotics with activity against most Gram-positive bacteria. Lanthionine (Lan) and ß-MeLan are unusual thioether-bridged, non-proteinogenic amino acids, which are characteristic features of lantibiotics. In this paper, we report the facile stereoselective synthesis of ß-methyllanthionines with orthogonal protection by nucleophilic ring opening of aziridines. This method leads to an expedient access to ß-methyllanthionines and allows production of over 30 g of ß-methyllanthionine in a single batch.


Subject(s)
Alanine/analogs & derivatives , Amino Acids/chemistry , Aziridines/chemistry , Gram-Positive Bacteria/drug effects , Indium/chemistry , Sulfides/chemical synthesis , Alanine/chemical synthesis , Alanine/chemistry , Gram-Positive Bacteria/chemistry , Molecular Structure , Sulfides/chemistry
6.
Nat Chem ; 11(4): 335-341, 2019 04.
Article in English | MEDLINE | ID: mdl-30804500

ABSTRACT

Peptidoglycan is an essential cell wall component that maintains the morphology and viability of nearly all bacteria. Its biosynthesis requires periplasmic transpeptidation reactions, which construct peptide crosslinkages between polysaccharide chains to endow mechanical strength. However, tracking the transpeptidation reaction in vivo and in vitro is challenging, mainly due to the lack of efficient, biocompatible probes. Here, we report the design, synthesis and application of rotor-fluorogenic D-amino acids (RfDAAs), enabling real-time, continuous tracking of transpeptidation reactions. These probes allow peptidoglycan biosynthesis to be monitored in real time by visualizing transpeptidase reactions in live cells, as well as real-time activity assays of D,D- and L,D-transpeptidases and sortases in vitro. The unique ability of RfDAAs to become fluorescent when incorporated into peptidoglycan provides a powerful new tool to study peptidoglycan biosynthesis with high temporal resolution and prospectively enable high-throughput screening for inhibitors of peptidoglycan biosynthesis.


Subject(s)
Amino Acids/metabolism , Bacterial Proteins/metabolism , Peptidoglycan/biosynthesis , Peptidyl Transferases/metabolism , Amino Acids/chemistry , Bacillus subtilis/enzymology , Bacillus subtilis/metabolism , Cell Wall/metabolism , Enzyme Assays/methods , Kinetics , Streptomyces/enzymology , Streptomyces/metabolism
7.
Angew Chem Int Ed Engl ; 57(34): 10994-10998, 2018 08 20.
Article in English | MEDLINE | ID: mdl-29750851

ABSTRACT

Advanced intermediates for the syntheses of tetrodotoxin reported by the groups of Fukuyama, Alonso, and Sato were prepared. Key steps include the toluene dioxygenase mediated dihydroxylation of either iodobenzene or benzyl acetate. The resulting diene diols were transformed into Fukuyama's intermediate in six steps, into Alonso's intermediate in nine steps, and into Sato's intermediate in ten steps.


Subject(s)
Oxidoreductases/chemistry , Tetrodotoxin/chemical synthesis , Benzyl Compounds/chemistry , Hydroxylation , Iodobenzenes/chemistry , Molecular Structure , Tetrodotoxin/chemistry
8.
Chem Sci ; 8(9): 6313-6321, 2017 Sep 01.
Article in English | MEDLINE | ID: mdl-28989665

ABSTRACT

Fluorescent d-amino acids (FDAAs) enable efficient in situ labeling of peptidoglycan in diverse bacterial species. Conducted by enzymes involved in peptidoglycan biosynthesis, FDAA labeling allows specific probing of cell wall formation/remodeling activity, bacterial growth and cell morphology. Their broad application and high biocompatibility have made FDAAs an important and effective tool for studies of peptidoglycan synthesis and dynamics, which, in turn, has created a demand for the development of new FDAA probes. Here, we report the synthesis of new FDAAs, with emission wavelengths that span the entire visible spectrum. We also provide data to characterize their photochemical and physical properties, and we demonstrate their utility for visualizing peptidoglycan synthesis in Gram-negative and Gram-positive bacterial species. Finally, we show the permeability of FDAAs toward the outer-membrane of Gram-negative organisms, pinpointing the probes available for effective labeling in these species. This improved FDAA toolkit will enable numerous applications for the study of peptidoglycan biosynthesis and dynamics.

9.
Molecules ; 22(10)2017 Oct 07.
Article in English | MEDLINE | ID: mdl-28991159

ABSTRACT

Skeletal muscle is a major insulin-target tissue and plays an important role in glucose homeostasis. Impaired insulin action in muscles leads to insulin resistance and type 2 diabetes mellitus. 5' AMP-activated kinase (AMPK) is an energy sensor, its activation increases glucose uptake in skeletal muscle and AMPK activators have been viewed as a targeted approach in combating insulin resistance. We previously reported AMPK activation and increased muscle glucose uptake by rosemary extract (RE). In the present study, we examined the effects and the mechanism of action of rosmarinic acid (RA), a major RE constituent, in L6 rat muscle cells. RA (5.0 µM) increased glucose uptake (186 ± 4.17% of control, p < 0.001) to levels comparable to maximum insulin (204 ± 10.73% of control, p < 0.001) and metformin (202 ± 14.37% of control, p < 0.001). Akt phosphorylation was not affected by RA, while AMPK phosphorylation was increased. The RA-stimulated glucose uptake was inhibited by the AMPK inhibitor compound C and was not affected by wortmannin, an inhibitor of phosphoinositide 3-kinase (PI3K). The current study shows an effect of RA to increase muscle glucose uptake and AMPK phosphorylation. RA deserves further study as it shows potential to be used as an agent to regulate glucose homeostasis.


Subject(s)
AMP-Activated Protein Kinases/metabolism , Cinnamates/pharmacology , Depsides/pharmacology , Glucose/metabolism , Muscle, Skeletal/drug effects , Polyphenols/pharmacology , Rosmarinus/chemistry , Animals , Carbohydrate Metabolism , Cell Line , Cinnamates/isolation & purification , Depsides/isolation & purification , Enzyme Activation , Muscle, Skeletal/metabolism , Phosphoinositide-3 Kinase Inhibitors , Phosphorylation , Plant Extracts/chemistry , Polyphenols/isolation & purification , Pyrazoles/metabolism , Pyrimidines/metabolism , Rats , Wortmannin/pharmacology , Rosmarinic Acid
10.
Org Lett ; 19(5): 1156-1159, 2017 03 03.
Article in English | MEDLINE | ID: mdl-28186763

ABSTRACT

The hydroxylated cyclohexenone carboxylic acid moiety of xylosmin was synthesized in eight steps from benzoic acid. The key steps in the synthesis involved the enzymatic dihydroxylation of benzoic acid by the whole cell fermentation with Ralstonia eutrophus B9, and Henbest epoxidation. Early attempts led to the synthesis of a C6 epimer of the methyl ester of the hydroxylated cyclohexenone carboxylic acid moiety. The absolute stereochemistry of an advanced intermediate was confirmed by X-ray crystallography. Complete characterization of the previously reported but not fully characterized hydroxylated cyclohexenone carboxylic acid is provided.

11.
Clin Exp Pharmacol Physiol ; 44(1): 94-102, 2017 01.
Article in English | MEDLINE | ID: mdl-27716981

ABSTRACT

Compounds that increase the activity of the energy sensor AMP-activated kinase (AMPK) have the potential to regulate blood glucose levels. Although rosemary extract (RE) has been reported to activate AMPK and reduce blood glucose levels in vivo, the chemical components responsible for these effects are not known. In the present study, we measured the levels of the polyphenol carnosic acid (CA) in RE and examined the effects and the mechanism of action of CA on glucose transport system in muscle cells. High performance liquid chromatography (HPLC) was used to measure the levels of CA in RE. Parental and GLUT4myc or GLUT1myc overexpressing L6 rat myotubes were used. Glucose uptake was assessed using [3 H]-2-deoxy-d-glucose. Total and phosphorylated levels of Akt and AMPK were measured by immunoblotting. Plasma membrane GLUT4myc and GLUT1myc levels were examined using a GLUT translocation assay. Statistics included analysis of variance (ANOVA) followed by Tukey's post-hoc test. At concentrations found in rosemary extract, CA stimulated glucose uptake in L6 myotubes. At 2.0 µmol/L CA a response (226 ± 9.62% of control, P=.001), similar to maximum insulin (201 ± 7.86% of control, P=.001) and metformin (213 ± 10.74% of control, P=.001) was seen. Akt phosphorylation was not affected by CA while AMPK and ACC phosphorylation was increased and the CA-stimulated glucose uptake was significantly reduced by the AMPK inhibitor compound C. Plasma membrane GLUT4 or GLUT1 glucose transporter levels were not affected by CA. Our study shows increased muscle cell glucose uptake and AMPK activation by low CA concentrations, found in rosemary extract, indicating that CA may be responsible for the antihyperglycemic properties of rosemary extract seen in vivo.


Subject(s)
AMP-Activated Protein Kinases/metabolism , Abietanes/pharmacology , Glucose/metabolism , Muscle Cells/metabolism , Muscle, Skeletal/metabolism , Rosmarinus , Abietanes/isolation & purification , Animals , Cells, Cultured , Dose-Response Relationship, Drug , Muscle Cells/drug effects , Muscle, Skeletal/cytology , Muscle, Skeletal/drug effects , Plant Extracts/isolation & purification , Plant Extracts/pharmacology , Rats
12.
Aust N Z J Psychiatry ; 41(3): 239-46, 2007 Mar.
Article in English | MEDLINE | ID: mdl-17464705

ABSTRACT

OBJECTIVE: The aim of the present study was to investigate the economic case for the implementation of the Triple P-Positive Parenting Program on a population basis in Queensland, Australia, in order to reduce the prevalence of conduct disorder in children. METHOD: Threshold analysis was undertaken together with a limited cost-effectiveness analysis. RESULTS: The Triple P-Positive Parenting Program is a dominant intervention; that is, it costs less than the amount it saves, until the reduction in prevalence falls below 7% where net costs become positive. CONCLUSIONS: Triple P is likely to be a worthwhile use of limited health funds. The economic case is promising, but further research is required to confirm the study results.


Subject(s)
Child Behavior Disorders/prevention & control , Education/economics , Health Plan Implementation/economics , Child , Child Behavior Disorders/economics , Child Behavior Disorders/epidemiology , Child, Preschool , Cohort Studies , Cost-Benefit Analysis/economics , Cross-Sectional Studies , Female , Humans , Male , Models, Economic , Queensland , Resource Allocation/economics
13.
J Drug Educ ; 29(1): 5-24, 1999.
Article in English | MEDLINE | ID: mdl-10349824

ABSTRACT

Fetal Alcohol Syndrome (FAS) is currently the major cause of mental retardation in the Western world. Since FAS is not a natural phenomenon and is created by mixing alcohol and pregnancy, the solution to decreasing the incidence of all alcohol-related birth defects is therefore entirely preventable. To date, little is known about the effectiveness of prevention programs in reducing the incidence of FAS. Therefore, it is the intention of this article to review the effectiveness of prevention programs in lowering the incidence of FAS. The present review revealed that prevention programs, to date, have been successful in raising awareness of FAS levels across the groups examined. However, this awareness has not been translated into behavioral changes in "high risk" drinkers as consumption levels in this group have decreased only marginally, indicating prevention programs have had minimal or no impact in lowering the incidence of FAS. Urgent steps must now be taken to fully test prevention programs, and find new strategies involving both sexes, to reduce and ultimately eliminate the incidence of FAS.


Subject(s)
Fetal Alcohol Spectrum Disorders/prevention & control , Health Promotion , Ethics , Female , Fetal Alcohol Spectrum Disorders/epidemiology , Humans , Incidence , Pregnancy , Prevalence , Risk Factors
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