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Phytochemistry ; 69(8): 1653-60, 2008 May.
Article in English | MEDLINE | ID: mdl-18377939

ABSTRACT

Pokeweed antiviral protein (PAP) isolated from Phytolacca americana is a ribosome-inactivating protein (RIP) that has RNA N-glycosidase (RNG) activity towards both eukaryotic and prokaryotic ribosomes. In contrast, karasurin-A (KRN), a RIP from Trichosanthes kirilowii var. japonica, is active only on eukaryotic ribosomes. Stepwise selection of chimera proteins between PAP and KRN indicated that the C-terminal region of PAP (residues 209-225) was critical for RNG activity toward prokaryotic ribosomes. When the region of PAP (residues 209-225) was replaced with the corresponding region of KRN the PAP chimera protein, like KRN, was active only on eukaryotic ribosomes. Furthermore, insertion of the region of PAP (residues 209-225) into the KRN chimera protein resulted not only in the detectable RNG activity toward prokaryotic ribosome, but also activity toward the eukaryotic ribosomes as well that was seven-fold higher than for the original KRN. In this study, the possibility of genetic manipulation of the activity and substrate specificity of RIPs is demonstrated.


Subject(s)
Prokaryotic Cells/physiology , RNA , Ribosome Inactivating Proteins, Type 1/genetics , Ribosome Inactivating Proteins/physiology , Ribosomes/physiology , Amino Acid Sequence , Crystallography, X-Ray , Enzyme Activation , Models, Molecular , Molecular Sequence Data , N-Glycosyl Hydrolases/chemistry , N-Glycosyl Hydrolases/genetics , N-Glycosyl Hydrolases/physiology , Plant Proteins/chemistry , Plant Proteins/genetics , Plant Proteins/physiology , Protein Conformation , RNA/chemistry , Recombinant Fusion Proteins/biosynthesis , Recombinant Fusion Proteins/chemistry , Recombinant Fusion Proteins/genetics , Ribosome Inactivating Proteins/chemistry , Ribosome Inactivating Proteins/genetics , Ribosome Inactivating Proteins, Type 1/chemistry , Ribosome Inactivating Proteins, Type 1/physiology , Sequence Alignment , Structure-Activity Relationship , Substrate Specificity
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