ABSTRACT
The study focuses on the chemistry of groundwater and if it is suitable for drinking and for use in agriculture using water quality indices, GIS mapping, and multivariate analyses in Sharsa Upazila, Jashore district, Bangladesh. In this study, the concentration of NH4+, K+, Ca2+, EC, Turbidity overstep BDWS drinking standards in 69 %, 14 %, 100 %, 40 % (WHO), 73 % of samples respectively. The value of Water Quality Indices (WQI) results inferred that the maximum specimen was held good quality for drinking uses, and the values distributed central eastern part to the south-eastern part were good quality water in the selected studied area. The study area's PH, EC, SAR, Na (%), TH, and NO3- values were mapped using GIS tools to show their spatial distribution. The cluster and correlation matrix analyses are used to validate for Principle Component Analysis (PCA). The five PCA results exhibited that the presence of EC, turbidity, K+, SO42- and NO3- was significant and was caused by both geogenic (rock weathering and cation exchange) and anthropogenic (agrochemicals, animal feedback) factor. According to the hydro-geochemical data, the maximum number of samples is of the Ca-Mg-HCO3-Cl type and is dominated by rocks. The irrigation water indices like MH, KR, SAR, and %Na indicate show high-quality groundwater for irrigation purposes. Most of the samples were satisfactory and compiled with WHO and Bangladeshi criteria for standard drinking water guideline values.
ABSTRACT
Aim and objective: Due to the a lot of unexplored proteins in HIV-1, this research aimed to explore the functional roles of a hypothetical protein (AAB33144.1) that might play a key role in HIV-1 pathogenicity. Methods: The homologous protein was identified along with building and validating the 3D structure by searching several bioinformatics tools. Results: Retroviral aspartyl protease and retropepsin like functional domains and motifs, folding pattern (cupredoxins), and subcellular localization in cytoplasmic membrane were determined as biological activity. Besides, the functional annotation revealed that the chosen hypothetical protein possessed protease-like activity. To validate our generated protein 3D structure, molecular docking was performed with five compounds where nelfinavir showed (-8.2 kcal/mol) best binding affinity against HXB2 viral protease (PDB ID: 7SJX) and main protease (PDB ID: 4EYR) protein. Conclusions: This study suggests that the annotated hypothetical protein related to protease action, which may be useful in viral genetics and drug discovery.
