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1.
Comb Chem High Throughput Screen ; 15(3): 216-20, 2012 Mar.
Article in English | MEDLINE | ID: mdl-22221054

ABSTRACT

DNA hypermethylation of CpG islands plays an important role in gene regulation during cancer development. Many techniques have been developed to detect global DNA methylation in cancer cells compared to normal tissues. This knowledge helps us to better understand cancer progression and also aids in the development of new biomarker for early cancer detection. New prognostic tools for monitoring drug efficacy during cancer treatment can also be developed. In this review, we will examine the different techniques that have been used to study DNA methylation, as well as the emerging high resolution, high throughput techniques for identification of methylated regions to defining cancer related genes in the cancer methylome.


Subject(s)
DNA Methylation , DNA/metabolism , High-Throughput Screening Assays/methods , Neoplasms/metabolism , Animals , CpG Islands , DNA/genetics , Genes, Neoplasm , Genetic Techniques , Humans , Neoplasms/genetics
2.
Mol Cell Proteomics ; 10(10): M110.005397, 2011 Oct.
Article in English | MEDLINE | ID: mdl-21622897

ABSTRACT

Colorectal cancer (CRC) is the third most commonly diagnosed cancer in males and second in females worldwide. Unfortunately 40-50% of patients already have metastatic disease at presentation when prognosis is poor with a 5-year survival of <10%. Reactive oxygen species (ROS) have been proposed to play a crucial role in tumor metastasis. We now show that higher levels of ROS accumulation are found in a colorectal cancer-derived metastatic cell line (SW620) compared with a cell line (SW480) derived from the primary lesion from the same patient. In addition, ROS accumulation can affect both the migratory and invasive capacity of SW480 and SW620 cells. To explore the molecular mechanism underlying ROS-induced migration and invasion in CRC, we have compared protein expression patterns between SW480 and SW620 cells using a two-dimensional electrophoresis-based proteomics strategy. A total of 63 altered proteins were identified from tandem MS analysis. Cluster analysis revealed dysregulated expression of multiple redox regulative or ROS responsive proteins, implicating their functional roles in colorectal cancer metastasis. Molecular and pathological validation demonstrated that altered expression of PGAM1, GRB2, DJ-1, ITGB3, SOD-1, and STMN1 was closely correlated with the metastatic potential of CRC. Functional studies showed that ROS markedly up-regulated expression of ITGB3, which in turn promoted an aggressive phenotype in SW480 cells, with concomitant up-regulated expression of STMN1. In contrast, knockdown of ITGB3 expression could mitigate the migratory and invasive potential of SW620 or H(2)O(2)-treated SW480 cells, accompanied by down-regulated expression of STMN1. The function of ITGB3 was dependent on the surface expression of integrin αvß3 heterodimer. Furthermore, STMN1 expression and the PI3K-Akt-mTOR pathway were found to be involved in ROS-induced and ITGB3-mediated migration and invasion of colorectal cancer cells. Taken together, these studies suggest that ITGB3 plays an important role in ROS-induced migration and invasion in CRC.


Subject(s)
Colorectal Neoplasms/pathology , Integrin beta3/metabolism , Reactive Oxygen Species/metabolism , Adult , Aged , Aged, 80 and over , Cell Line, Tumor , Cell Movement , Colorectal Neoplasms/genetics , Colorectal Neoplasms/metabolism , Female , Gene Expression Regulation, Neoplastic , Humans , Hydrogen Peroxide/metabolism , Integrin beta3/genetics , Male , Middle Aged , Neoplasm Invasiveness , Neoplasm Metastasis , Proteomics , Reactive Oxygen Species/analysis
3.
Am J Physiol Heart Circ Physiol ; 290(2): H517-24, 2006 Feb.
Article in English | MEDLINE | ID: mdl-16172162

ABSTRACT

We aimed to determine whether nitroparacetamol (NO-paracetamol) and paracetamol exhibit cardioprotective effects. Myocardial infarction (MI) was induced in rats, and drug treatment was started 1 wk before surgery. Mortality rate and infarct size at 2 days after MI were compared. Treatment groups included vehicle (saline), paracetamol (5 mg x kg(-1) x day(-1)) and NO-paracetamol (15 mg x kg(-1) x day(-1)). Mortality rates for vehicle (n = 80), paracetamol (n = 79), and NO-paracetamol (n = 76) groups were 37.5%, 21.5%, and 26.3%, respectively. Infarct size for the vehicle group was 44.8% (+/-6.1%) of the left ventricle (LV). For the paracetamol and NO-paracetamol groups, infarct size was 31.3% (+/-5.6%) and 30.7% (+/-8.1%) of the LV, respectively. Both paracetamol- and NO-paracetamol-treated groups showed increased activities of catalase and SOD compared with the vehicle group. They could attenuate endothelial, inducible, and neuronal nitric oxide synthase and cyclooxygenase-1 and -2 gene expression after MI. The observation indicates the potential clinical significance of the cardioprotective effects of these drugs.


Subject(s)
Acetaminophen/analogs & derivatives , Acetaminophen/pharmacology , Cardiotonic Agents/pharmacology , Myocardial Infarction/physiopathology , Nitrates/pharmacology , Animals , Capillaries/pathology , Coronary Vessels/pathology , Hemodynamics/drug effects , Liver/enzymology , Male , Myocardial Infarction/mortality , Myocardial Infarction/pathology , Nitrates/blood , Nitric Oxide Synthase/genetics , Nitrites/blood , Oxidoreductases/metabolism , Prostaglandin-Endoperoxide Synthases/genetics , RNA, Messenger/metabolism , Rats , Rats, Wistar
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