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1.
Sci Adv ; 5(10): eaaw3113, 2019 10.
Article in English | MEDLINE | ID: mdl-31681835

ABSTRACT

The tumor-suppressing function of SMAD4 is frequently subverted during mammary tumorigenesis, leading to cancer growth, invasion, and metastasis. A long-standing concept is that SMAD4 is not regulated by phosphorylation but ubiquitination. Our search for signaling pathways regulated by breast tumor kinase (BRK), a nonreceptor protein tyrosine kinase that is up-regulated in ~80% of invasive ductal breast tumors, led us to find that BRK competitively binds and phosphorylates SMAD4 and regulates transforming growth factor-ß/SMAD4 signaling pathway. A constitutively active BRK (BRK-Y447F) phosphorylates SMAD4, resulting in its recognition by the ubiquitin-proteasome system, which accelerates SMAD4 degradation. Activated BRK-mediated degradation of SMAD4 is associated with the repression of tumor suppressor gene FRK and increased expression of mesenchymal markers, SNAIL, and SLUG. Thus, our data suggest that combination therapies targeting activated BRK signaling may have synergized the benefits in the treatment of SMAD4 repressed cancers.


Subject(s)
Breast Neoplasms/metabolism , Neoplasm Proteins/metabolism , Protein-Tyrosine Kinases/metabolism , Smad4 Protein/metabolism , Snail Family Transcription Factors/metabolism , Breast Neoplasms/pathology , Cell Line, Tumor , Epithelial-Mesenchymal Transition , Female , Gene Expression Regulation, Neoplastic , Genes, Tumor Suppressor , Humans , Neoplasm Proteins/genetics , Phosphorylation , Protein-Tyrosine Kinases/genetics , Smad4 Protein/genetics , Transforming Growth Factor beta/metabolism , Tyrosine/metabolism , Ubiquitination
2.
J Anim Sci ; 94(8): 3240-3254, 2016 Aug.
Article in English | MEDLINE | ID: mdl-27695781

ABSTRACT

Stresses imposed on livestock have significant impact on their health and productivity as well as public perceptions of animal welfare. Understanding stress responses in livestock may help refine management procedures and facilitate selection of stress-tolerant animals. In this study, behavioral (chute entry order, chute behavior, and exit velocity), physiological (serum cortisol), and biochemical (kinome) responses were evaluated in cattle ( = 20) subjected to three 5-min restraint periods with weekly intervals. Correlations among stress responses were assessed across all animals as well as for subgroups ( = 4) representing animals consistently displaying a high and low extreme of serum cortisol responses. Across all animals, entry order ( = 0.006) and exit velocity ( = 0.023) were positively correlated with serum cortisol; however, these correlations were not consistently reproducible for the high and low serum cortisol responders. Kinome profiling of peripheral blood mononuclear cells revealed distinct signaling events between the high and low cortisol responders. In particular, kinome profiling revealed significant differences in carbohydrate metabolism and apoptosis that were independently validated. Furthermore, changes in serum glucose levels provided a reliable, inexpensive indicator of serum cortisol levels and often had greater predictive value than cortisol for stress-related behavioral responses. Serum cortisol levels displayed a pattern consistent with sensitization, whereas no habituation or sensitization was observed for serum glucose levels or behavioral responses. Collectively, this investigation provides insight into correlations among physiological, behavioral, and biochemical responses of cattle subjected to a brief restraint that may provide biomarkers for selection of stress-tolerant animals.


Subject(s)
Behavior, Animal/physiology , Cattle/physiology , Hydrocortisone/blood , Restraint, Physical/adverse effects , Stress, Physiological , Animal Welfare , Animals , Blood Glucose/analysis , Female , Leukocytes, Mononuclear
3.
Mini Rev Med Chem ; 10(7): 596-614, 2010 Jun.
Article in English | MEDLINE | ID: mdl-20500150

ABSTRACT

Host defence peptides (HDPs) are multi-functional inducers and effectors of host immunity. Through their direct antimicrobial activity HDPs have for been successfully utilized for many years as topical antibiotics and food preservatives. The more recent appreciation of HDP immunomodulatory activities offers additional opportunities for application as systemic antimicrobials, anti-inflammatory agents and vaccine adjuvants. HDPs have demonstrated proof-of-principle success in each of these applications. Optimization of HDPs for these objectives will benefit from a greater comprehension of the structural basis of their various activities. Such an understanding will facilitate rational design and/or selection of peptides with enhanced properties. This is complicated, however, by the diversity of HDP sequences, structures and mechanisms of action. Furthermore, while the ability of HDPs to undergo template-driven formation of bioactive structures enables these small peptides to perform a diverse range of actions it also complicates efforts to understand contributions of particular structural features to specific activities. With recognition of these limitations, but consideration of the emerging importance of this exciting class of molecules, we review the current understanding of the structural basis of select HDP activities as well as present strategies for HDP selection and optimization.


Subject(s)
Peptides/chemistry , Adjuvants, Immunologic/chemistry , Adjuvants, Immunologic/pharmacology , Anti-Infective Agents/chemistry , Anti-Infective Agents/pharmacology , Anti-Inflammatory Agents/chemistry , Anti-Inflammatory Agents/pharmacology , Humans , Immunologic Factors/chemistry , Immunologic Factors/pharmacology , Peptides/immunology , Peptides/pharmacology , Structure-Activity Relationship
4.
J Biol Chem ; 276(45): 41588-93, 2001 Nov 09.
Article in English | MEDLINE | ID: mdl-11551914

ABSTRACT

The active center histidines of the Escherichia coli phosphoenolpyruvate:sugar phosphotransferase system proteins; histidine-containing protein, enzyme I, and enzyme IIA(Glc) were substituted with a series of amino acids (serine, threonine, tyrosine, cysteine, aspartate, and glutamate) with the potential to undergo phosphorylation. The mutants [H189E]enzyme I, [H15D]HPr, and [H90E]enzyme IIA(Glc) retained ability for phosphorylation as indicated by [(32)P]phosphoenolpyruvate labeling. As the active center histidines of both enzyme I and enzyme IIA(Glc) undergo phosphorylation of the N(epsilon2) atom, while HPr is phosphorylated at the N(delta1) atom, a pattern of successful substitution of glutamates for N(epsilon2) phosphorylations and aspartates for N(delta1) phosphorylations emerges. Furthermore, phosphotransfer between acyl residues: P-aspartyl to glutamyl and P-glutamyl to aspartyl was demonstrated with these mutant proteins and enzymes.


Subject(s)
Bacterial Proteins , Escherichia coli/enzymology , Phosphoenolpyruvate Sugar Phosphotransferase System/chemistry , Aspartic Acid , Glutamic Acid , Histidine , Phosphoenolpyruvate Sugar Phosphotransferase System/metabolism , Phosphorylation , Structure-Activity Relationship
5.
J Biol Chem ; 274(31): 21776-82, 1999 Jul 30.
Article in English | MEDLINE | ID: mdl-10419492

ABSTRACT

The active site residue, His(15), in histidine-containing protein, HPr, can be replaced by aspartate and still act as a phosphoacceptor and phosphodonor with enzyme I and enzyme IIA(glucose), respectively. Other substitutions, including cysteine, glutamate, serine, threonine, and tyrosine, failed to show any activity. Enzyme I K(m) for His(15) --> Asp HPr is increased 10-fold and V(max) is decreased 1000-fold compared with wild type HPr. The phosphorylation of Asp(15) led to a spontaneous internal rearrangement involving the loss of the phosphoryl group and a water molecule, which was confirmed by mass spectrometry. The protein species formed had a higher pI than His(15) --> Asp HPr, which could arise from the formation of a succinimide or an isoimide. Hydrolysis of the isolated high pI form gave only aspartic acid at residue 15, and no isoaspartic acid was detected. This indicates that an isoimide rather than a succinimide is formed. In the absence of phosphorylation, no formation of the high pI form could be found, indicating that phosphorylation catalyzed the formation of the cyclization. The possible involvement of Asn(12) in an internal cyclization with Asp(15) was eliminated by the Asn(12) --> Ala mutation in His(15) --> AspHPr. Asn(12) substitutions of alanine, aspartate, serine, and threonine in wild type HPr indicated a general requirement for residues capable of forming a hydrogen bond with the Nepsilon(2) atom of His(15), but elimination of the hydrogen bond has only a 4-fold decrease in k(cat)/K(m).


Subject(s)
Aspartic Acid , Escherichia coli/enzymology , Histidine , Phosphoenolpyruvate Sugar Phosphotransferase System/chemistry , Phosphoenolpyruvate Sugar Phosphotransferase System/metabolism , Amino Acid Substitution , Bacterial Proteins/chemistry , Bacterial Proteins/metabolism , Binding Sites , Crystallization , Enzyme Stability , Hydrogen-Ion Concentration , Kinetics , Models, Molecular , Mutagenesis, Site-Directed , Phosphoenolpyruvate Sugar Phosphotransferase System/isolation & purification , Phosphorylation , Protein Structure, Tertiary , Recombinant Proteins/chemistry , Recombinant Proteins/isolation & purification , Recombinant Proteins/metabolism
6.
Biochem Cell Biol ; 77(6): 507-13, 1999.
Article in English | MEDLINE | ID: mdl-10668628

ABSTRACT

The structure of the N-terminal domain of enzyme I complexed with histidine-containing protein (HPr) has been described by multi-dimensional NMR. Residues in HPr involved in binding were identified by intermolecular nuclear Overhauser effects (Garrett et al. 1999). Most of these residues have been mutated, and the effect of these changes on binding has been assessed by enzyme I kinetic measurement. Changes to Thr16, Arg17, Lys24, Lys27, Ser46, Leu47, Lys49, Gln51, and Thr56 result in increases to the HPr Km of enzyme I, which would be compatible with changes in binding. Except for mutations to His15 and Arg17, very little or no change in Vmax was found. Alanine replacements for Gln21, Thr52, and Leu55 have no effect. The mutation Lys40Ala also affects HPr Km of enzyme I; residue 40 is contiguous with the enzyme I binding site in HPr and was not identified by NMR. The mutations leading to a reduction in the size of the side chain (Thr16Ala, Arg17Gly, Lys24Ala, Lys27Ala, and Lys49Gly) caused relatively large increases in Km (>5-fold) indicating these residues have more significant roles in binding to enzyme I. Acidic replacement at Ser46 caused very large increases (>100-fold), while Gln51Glu gave a 3-fold increase in Km. While these results essentially concur with the identification of residues by the NMR experiments, the apparent importance of individual residues as determined by mutation and kinetic measurement does not necessarily correspond with the number of contacts derived from observed intermolecular nuclear Overhauser effects.


Subject(s)
Bacterial Proteins/metabolism , Escherichia coli/enzymology , Phosphoenolpyruvate Sugar Phosphotransferase System/metabolism , Bacterial Proteins/chemistry , Bacterial Proteins/genetics , Bacterial Proteins/isolation & purification , Binding Sites , Magnetic Resonance Spectroscopy , Models, Molecular , Mutagenesis, Site-Directed , Phosphoenolpyruvate Sugar Phosphotransferase System/chemistry , Phosphoenolpyruvate Sugar Phosphotransferase System/genetics , Phosphoenolpyruvate Sugar Phosphotransferase System/isolation & purification , Protein Structure, Tertiary , Structure-Activity Relationship
7.
Biochemistry ; 35(35): 11260-7, 1996 Sep 03.
Article in English | MEDLINE | ID: mdl-8784179

ABSTRACT

Histidine-containing protein (HPr) is a phosphocarrier protein of the bacterial phosphoenolpyruvate:sugar phosphotransferase system. HPr is phosphorylated at the active site residue, His15, by phosphoenolpyruvate-dependent enzyme I in the first enzyme reaction in the process of phosphoryl transfer to sugar. In many Gram-positive bacterial species HPr may also be phosphorylated at Ser46 by an ATP-dependent protein kinase but not in the Gram-negative Escherichia coli and Salmonella typhimurium. One effect of the phosphorylation at Ser46 is to make HPr a poor acceptor for phosphorylation at His15. In Bacillus subtilis HPr, the mutation Ser46Asp mimics the effects of phosphorylation. A series of mutations were made at Ser46 in E. coli HPr: Ala, Arg, Asn, Asp, Glu, and Gly. The two acidic replacements mimic the effects of phosphorylation of Ser46 in HPrs from Gram-positive bacteria. In particular, when mutated to Asp46, the His 15 phosphoacceptor activity (enzyme I Km/Kcat) decreases by about 2000-fold (enzyme I Km, 4 mM HPr; Kcat, approximately 30%). The alanine and glycine mutations had near-wild-type properties, and the asparagine and arginine mutations yielded small changes to the Km values. The crystallographic tertiary structure of Ser46Asp HPr has been determined at 1.5 A resolution, and several changes have been observed which appear to be the effect of the mutation. There is a tightening of helix B, which is demonstrated by a consistent shortening of hydrogen bond lengths throughout the helix as compared to the wild-type structure. There is a repositioning of the Gly54 residue to adopt a 3(10) helical pattern which is not present in the wild-type HPr. In addition, the higher resolution of the mutant structure allows for a more definitive placement of the carbonyl of Pro11. The consequence of this change is that there is no torsion angle strain at residue 16. This result suggests that there is no active site torsion angle strain in wild-type E. coli HPr. The lack of substantial change at the active center of E. coli HPr Ser46Asp HPr suggests that the effect of the Ser46 phosphorylation in HPrs from Gram-positive bacteria is due to an electrostatic interference with enzyme I binding.


Subject(s)
Bacterial Proteins , Escherichia coli/chemistry , Gram-Positive Bacteria/chemistry , Phosphoenolpyruvate Sugar Phosphotransferase System/metabolism , Serine/metabolism , Base Sequence , Circular Dichroism , Crystallography, X-Ray , Escherichia coli/genetics , Hydrogen Bonding , Hydrogen-Ion Concentration , Kinetics , Magnetic Resonance Spectroscopy , Models, Molecular , Molecular Sequence Data , Phosphoenolpyruvate Sugar Phosphotransferase System/antagonists & inhibitors , Phosphoenolpyruvate Sugar Phosphotransferase System/chemistry , Phosphoenolpyruvate Sugar Phosphotransferase System/genetics , Phosphorylation , Point Mutation , Protein Binding , Protein Conformation , Protein Structure, Secondary , Protein Structure, Tertiary , Serine/genetics
8.
J Long Term Eff Med Implants ; 6(3-4): 143-55, 1996.
Article in English | MEDLINE | ID: mdl-10167358

ABSTRACT

Titanium alloy (ASTM F-136) rods were coated with hydroxyapatite (HA) of 3 levels of crystallinity, which were determined by X-ray diffraction (XRD) analysis to be 60.5%, 52.8%, and 47.8%. Fourier Transform Infrared (FTIR) spectroscopy analysis showed the removal of the hydroxyl and carbonate groups as compared to the original HA powder. It appears that these changes are caused by the high temperature plasma spray coating process. Cyclic fatigue testing in a lactated Ringer's solution to 5 million cycles showed no statistical difference in calcium dissolution among the 3 crystalline levels, whereas phosphorus dissolution was lowest from the highest crystalline coating sample. The mechanical properties, however, did not change in response to fatigue loading.


Subject(s)
Alloys , Durapatite , Titanium , Biomechanical Phenomena , Crystallography, X-Ray , Dental Implants , Humans , Spectroscopy, Fourier Transform Infrared , Stress, Mechanical
9.
Ann Biomed Eng ; 16(4): 349-65, 1988.
Article in English | MEDLINE | ID: mdl-3177982

ABSTRACT

The objective of this investigation was to aid in the determination of the mechanism by which oxygen consumption changes in proportion to coronary perfusion pressure or coronary blood flow. A mathematical model of oxygen transport and consumption in the isolated-perfused heart was developed, based on data from an autoregulating, cell-free perfused, externally paced, isovolumic feline heart preparation. The model features the unique combination of Michaelis-Menten kinetics, and one-dimensional (axial) diffusion in radially well-mixed tissue. An adaptive finite-difference integration routine was used to solve the resulting third order stiff two-point boundary value problem. A simplex minimization was employed to determine the parameter values that minimized the squared difference between the model and the experimental data in terms of tissue PO2 distribution (histograms). Different cases of the model representing pressure-induced, flow-induced, and "magnified" flow effects were run. The flow-dependent oxygen consumption version of the model produced a histogram squared error 30% lower than the pressure-induced version and 5% lower than any other case. The model and a critical review of the literature indicate that a flow-related mechanism is responsible for this phenomenon. Evidence also demonstrates that the Michaelis-Menten kinetics constant is not constant for different oxygen tensions.


Subject(s)
Coronary Circulation , Myocardium/metabolism , Oxygen Consumption , Kinetics , Mathematics , Models, Biological , Models, Cardiovascular , Pulsatile Flow
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