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1.
Sci Data ; 6(1): 231, 2019 10 25.
Article in English | MEDLINE | ID: mdl-31653867

ABSTRACT

The methods for electrophysiology in neuroscience have evolved tremendously over the recent years with a growing emphasis on dense-array signal recordings. Such increased complexity and augmented wealth in the volume of data recorded, have not been accompanied by efforts to streamline and facilitate access to processing methods, which too are susceptible to grow in sophistication. Moreover, unsuccessful attempts to reproduce peer-reviewed publications indicate a problem of transparency in science. This growing problem could be tackled by unrestricted access to methods that promote research transparency and data sharing, ensuring the reproducibility of published results. Here, we provide a free, extensive, open-source software that provides data-analysis, data-management and multi-modality integration solutions for invasive neurophysiology. Users can perform their entire analysis through a user-friendly environment without the need of programming skills, in a tractable (logged) way. This work contributes to open-science, analysis standardization, transparency and reproducibility in invasive neurophysiology.


Subject(s)
Electrophysiology/methods , Software , Datasets as Topic , Humans , Information Dissemination , Reproducibility of Results
2.
Neuroimage ; 145(Pt A): 107-117, 2017 01 15.
Article in English | MEDLINE | ID: mdl-27743901

ABSTRACT

Magnetoencephalography (MEG) is used in clinical and fundamental studies of brain functions, primarily for the excellent temporal resolution it provides. The spatial resolution is often assumed to be poor, because of the ill-posed nature of MEG source modeling. However, the question of spatial resolution in MEG has seldom been studied in quantitative detail. Here we use the well-known retinotopic organization of the primary visual cortex (V1) as a benchmark for estimating the spatial resolution of MEG source imaging. Using a standard visual stimulation paradigm in human subjects, we find that individual MEG sources exhibit well-delineated visual receptive fields that collectively follow the known mapping of the retinal surface onto the cortex. Based on the size of these receptive fields and the variability of the signal, we are able to resolve MEG signals separated by approximately 7 mm in smooth regions of cortex and less than 1 mm for signals near curved gyri. The maximum resolution is thus comparable to that of the spacing of hypercolumns in human visual cortex. Overall, our results suggest that the spatial resolution of MEG can approach or in some cases exceed that of fMRI.


Subject(s)
Functional Neuroimaging/methods , Magnetoencephalography/methods , Retina/physiology , Visual Cortex/physiology , Visual Fields/physiology , Visual Perception/physiology , Adult , Humans , Male , Visual Cortex/diagnostic imaging
3.
Neuron ; 85(3): 615-27, 2015 Feb 04.
Article in English | MEDLINE | ID: mdl-25600124

ABSTRACT

Traveling waves of neural activity are frequently observed to occur in concert with the presentation of a sensory stimulus or the execution of a movement. Although such waves have been studied for decades, little is known about their function. Here we show that traveling waves in the primate extrastriate visual cortex provide a means of integrating sensory and motor signals. Specifically, we describe a traveling wave of local field potential (LFP) activity in cortical area V4 of macaque monkeys that is triggered by the execution of saccadic eye movements. These waves sweep across the V4 retinotopic map, following a consistent path from the foveal to the peripheral representations of space; their amplitudes correlate with the direction and size of each saccade. Moreover, these waves are associated with a reorganization of the postsaccadic neuronal firing patterns, which follow a similar retinotopic progression, potentially prioritizing the processing of behaviorally relevant stimuli.


Subject(s)
Psychomotor Performance/physiology , Reaction Time/physiology , Saccades/physiology , Visual Cortex/physiology , Visual Perception/physiology , Animals , Macaca mulatta , Photic Stimulation/methods , Random Allocation
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