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1.
Forensic Sci Int Genet ; 49: 102391, 2020 11.
Article in English | MEDLINE | ID: mdl-32957016

ABSTRACT

One of the main goals of the Spanish and Portuguese-Speaking Working Group of the International Society for Forensic Genetics (GHEP-ISFG) is to promote and contribute to the development and dissemination of scientific knowledge in the field of forensic genetics. The GHEP-ISFG supports several Working Commissions which develop different scientific activities. One of them, the Working Commission on "Massively Parallel Sequencing (MPS): Forensic Applications", organized its first collaborative exercise on forensic applications of MPS technology in 2019. The aim of this exercise was to assess the concordance between the MPS results and those obtained with conventional technologies (capillary electrophoresis and Sanger sequencing), as well as to compare the results obtained within the different MPS platforms and/or the different kits/panels and analysis software packages (commercial and open-access) available on the market. The seven participating laboratories analyzed some samples of the annual GHEP-ISFG proficiency test (EIADN No. 27 (2019)), using Ion Torrent™ or MiSeq FGx® platforms. Six of them sent autosomal STR sequence data, five laboratories performed MPS analysis of individual identification SNPs, four laboratories reported MPS data of Y-chromosomal STRs, and X-chromosomal STRs, three laboratories performed MPS analysis of ancestry informative SNPs and phenotype informative SNPs, two labs performed MPS analysis of the mitochondrial DNA control region, and only one lab produced MPS data of lineage informative SNPs. Autosomal STR sequencing results were highly concordant to the consensus obtained by capillary electrophoresis in the EIADN No. 27 (2019) exercise. Furthermore, in general, a high level of concordance was observed between the results of the participating laboratories, regardless of the platform used. The main discordances were due to errors during the analysis process or from sequence data obtained with low depth of coverage. In this paper we highlight some issues that still arise, such as standardization of the nomenclature for STRs analyzed by sequencing with MPS, the universal uptake of a nomenclature framework by the analysis software, and well established validation and accreditation of the new MPS platforms for use in routine forensic case-work.


Subject(s)
High-Throughput Nucleotide Sequencing/standards , Laboratories/standards , Chromosomes, Human, X , Chromosomes, Human, Y , DNA, Mitochondrial/genetics , Forensic Genetics/standards , Humans , Microsatellite Repeats , Polymorphism, Single Nucleotide , Sequence Analysis, DNA , Societies, Scientific
2.
Adapt Phys Activ Q ; 32(2): 125-36, 2015 Apr.
Article in English | MEDLINE | ID: mdl-25799593

ABSTRACT

The aim of this study was to provide information about the relationship of bone mineral content (BMC) and density (BMD) with some physical-fitness-related variables in a sample of women with fibromyalgia (FM) and age-matched women without FM. Twenty-eight women clinically diagnosed with FM (age 51.1 ± 8.4 yr, M ± SD) and 22 age-matched controls participated in the study. Whole-body BMC and BMD, lean mass, handgrip strength, quadriceps strength, and cardiovascular fitness were measured in all participants. The association between physical-fitness variables and bone-related variables was tested by linear regression controlling for body weight as a possible confounder. There were no differences in BMC or BMD between groups. Women with FM had lower values of handgrip strength, quadriceps strength, and VO2peak than the control group. Handgrip strength and aerobic capacity were associated with BMC and BMD and quadriceps strength was associated with BMD in women with FM; however, only VO2peak was associated with BMC in the group of women without FM. Bone mass of women with FM may be more susceptible to changes in physical fitness than that of the women without fibromyalgia.


Subject(s)
Bone Density/physiology , Exercise/physiology , Fibromyalgia/physiopathology , Muscle Strength/physiology , Physical Fitness/physiology , Absorptiometry, Photon , Adult , Aged , Analysis of Variance , Body Composition , Body Mass Index , Calcium, Dietary/administration & dosage , Case-Control Studies , Comorbidity , Exercise Test , Female , Fibromyalgia/epidemiology , Hand Strength/physiology , Humans , Middle Aged , Osteoporosis/epidemiology , Oxygen Consumption , Physical Examination , Quadriceps Muscle/physiology , Spain/epidemiology , Surveys and Questionnaires
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