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1.
Elife ; 82019 12 04.
Article in English | MEDLINE | ID: mdl-31799933

ABSTRACT

Appropriate regulation of autophagy is crucial for clearing toxic proteins from cells. Defective autophagy results in accumulation of toxic protein aggregates that detrimentally affect cellular function and organismal survival. Here, we report that the microRNA miR-1 regulates the autophagy pathway through conserved targeting of the orthologous Tre-2/Bub2/CDC16 (TBC) Rab GTPase-activating proteins TBC-7 and TBC1D15 in Caenorhabditis elegans and mammalian cells, respectively. Loss of miR-1 causes TBC-7/TBC1D15 overexpression, leading to a block on autophagy. Further, we found that the cytokine interferon-ß (IFN-ß) can induce miR-1 expression in mammalian cells, reducing TBC1D15 levels, and safeguarding against proteotoxic challenges. Therefore, this work provides a potential therapeutic strategy for protein aggregation disorders.


Subject(s)
Autophagy , Caenorhabditis elegans/metabolism , Interferon-beta/metabolism , MicroRNAs/metabolism , Protein Aggregates , 3' Untranslated Regions/genetics , Animals , Base Sequence , Caenorhabditis elegans Proteins/genetics , Caenorhabditis elegans Proteins/metabolism , GTPase-Activating Proteins/genetics , GTPase-Activating Proteins/metabolism , HeLa Cells , Humans , Huntingtin Protein/metabolism , Mice , Mutant Proteins/metabolism , Peptides/metabolism , RNA, Messenger/genetics , RNA, Messenger/metabolism , rab GTP-Binding Proteins/metabolism , rab7 GTP-Binding Proteins
2.
Sci Rep ; 9(1): 7619, 2019 May 20.
Article in English | MEDLINE | ID: mdl-31110188

ABSTRACT

A correction has been published and is appended to both the HTML and PDF versions of this paper. The error has not been fixed in the paper.

3.
Sci Rep ; 5: 8866, 2015 Mar 09.
Article in English | MEDLINE | ID: mdl-25746291

ABSTRACT

The ability of animals to sense and respond to elevated temperature is essential for survival. Transcriptional control of the heat stress response has been much studied, whereas its posttranscriptional regulation by microRNAs (miRNAs) is not well understood. Here we analyzed the miRNA response to heat stress in Caenorhabditis elegans and show that a discrete subset of miRNAs is thermoregulated. Using in-depth phenotypic analyses of miRNA deletion mutant strains we reveal multiple developmental and post-developmental survival and behavioral functions for specific miRNAs during heat stress. We have identified additional functions for already known players (mir-71 and mir-239) as well as identifying mir-80 and the mir-229 mir-64-66 cluster as important regulators of the heat stress response in C. elegans. These findings uncover an additional layer of complexity to the regulation of stress signaling that enables animals to robustly respond to the changing environment.


Subject(s)
Caenorhabditis elegans Proteins/genetics , Caenorhabditis elegans/physiology , Gene Expression Regulation/genetics , Heat-Shock Response/physiology , MicroRNAs/physiology , Transcriptional Activation/physiology , Animals
4.
Science ; 341(6152): 1404-8, 2013 Sep 20.
Article in English | MEDLINE | ID: mdl-24052309

ABSTRACT

An appropriate balance in glycosylation of proteoglycans is crucial for their ability to regulate animal development. Here, we report that the Caenorhabditis elegans microRNA mir-79, an ortholog of mammalian miR-9, controls sugar-chain homeostasis by targeting two proteins in the proteoglycan biosynthetic pathway: a chondroitin synthase (SQV-5; squashed vulva-5) and a uridine 5'-diphosphate-sugar transporter (SQV-7). Loss of mir-79 causes neurodevelopmental defects through SQV-5 and SQV-7 dysregulation in the epidermis. This results in a partial shutdown of heparan sulfate biosynthesis that impinges on a LON-2/glypican pathway and disrupts neuronal migration. Our results identify a regulatory axis controlled by a conserved microRNA that maintains proteoglycan homeostasis in cells.


Subject(s)
Caenorhabditis elegans/physiology , Cell Movement , Epidermis/metabolism , Heparan Sulfate Proteoglycans/biosynthesis , MicroRNAs/physiology , Neurons/physiology , Animals , Caenorhabditis elegans/metabolism , Caenorhabditis elegans Proteins/biosynthesis , Caenorhabditis elegans Proteins/genetics , Caenorhabditis elegans Proteins/metabolism , Glycosylation , Glycosyltransferases/metabolism , Glypicans/biosynthesis , Glypicans/genetics , Heparan Sulfate Proteoglycans/genetics , MicroRNAs/genetics , Monosaccharide Transport Proteins/metabolism , Nucleobase, Nucleoside, Nucleotide, and Nucleic Acid Transport Proteins/metabolism
5.
Biochem J ; 452(1): 97-109, 2013 May 15.
Article in English | MEDLINE | ID: mdl-23458101

ABSTRACT

ADAM (a disintegrin and metalloproteinase) 12 is a metalloprotease implicated in cancer progression. ADAM12 can activate membrane-anchored proteins, such as sonic hedgehog, Delta-like 1 and certain epidermal growth factor receptor ligands, through a process called ectodomain shedding. We screened several membrane-anchored proteins to further dissect the substrate profile of ADAM12-mediated ectodomain shedding, and found shedding of five previously unreported substrates [Kitl1, VE-cadherin (vascular endothelial cadherin), Flk-1 (fetal liver kinase 1), Tie-2, and VCAM-1 (vascular cell adhesion molecule 1)], of which the latter four are specifically expressed by endothelial cells. We also observed that ADAM12 expression was increased in the tumour vasculature of infiltrating ductal carcinoma of the human breast as compared with little to no expression in normal breast tissue vasculature, suggesting a role for ADAM12 in tumour vessels. These results prompted us to further evaluate ADAM12-mediated shedding of two endothelial cell proteins, VE-cadherin and Tie-2. Endogenous ADAM12 expression was very low in cultured endothelial cells, but was significantly increased by cytokine stimulation. In parallel, the shed form of VE-cadherin was elevated in such cytokine-stimulated endothelial cells, and ADAM12 siRNA (small interfering RNA) knockdown reduced cytokine-induced shedding of VE-cadherin. In conclusion, the results of the present study demonstrate a role for ADAM12 in ectodomain shedding of several membrane-anchored endothelial proteins. We speculate that this process may have importance in tumour neovascularization or/and tumour cell extravasation.


Subject(s)
ADAM Proteins/biosynthesis , ADAM Proteins/chemistry , Breast Neoplasms/blood supply , Breast Neoplasms/chemistry , Human Umbilical Vein Endothelial Cells/chemistry , Membrane Proteins/chemistry , ADAM Proteins/deficiency , ADAM12 Protein , Animals , Breast Neoplasms/genetics , Cell Line, Transformed , Cell Line, Tumor , Female , Gene Expression Regulation, Neoplastic , HEK293 Cells , Human Umbilical Vein Endothelial Cells/metabolism , Human Umbilical Vein Endothelial Cells/pathology , Humans , Membrane Proteins/biosynthesis , Membrane Proteins/deficiency , Mice , Mice, Knockout , Neovascularization, Pathologic/genetics , Neovascularization, Pathologic/pathology
6.
Front Genet ; 3: 222, 2012.
Article in English | MEDLINE | ID: mdl-23112806

ABSTRACT

Physiological stress can be defined as any external or internal condition that challenges the homeostasis of a cell or an organism. It can be divided into three different aspects: environmental stress, intrinsic developmental stress, and aging. Throughout life all living organisms are challenged by changes in the environment. Fluctuations in oxygen levels, temperature, and redox state for example, trigger molecular events that enable an organism to adapt, survive, and reproduce. In addition to external stressors, organisms experience stress associated with morphogenesis and changes in inner chemistry during normal development. For example, conditions such as intrinsic hypoxia and oxidative stress, due to an increase in tissue mass, have to be confronted by developing embryos in order to complete their development. Finally, organisms face the challenge of stochastic accumulation of molecular damage during aging that results in decline and eventual death. Studies have shown that the nervous system plays a pivotal role in responding to stress. Neurons not only receive and process information from the environment but also actively respond to various stresses to promote survival. These responses include changes in the expression of molecules such as transcription factors and microRNAs that regulate stress resistance and adaptation. Moreover, both intrinsic and extrinsic stresses have a tremendous impact on neuronal development and maintenance with implications in many diseases. Here, we review the responses of neurons to various physiological stressors at the molecular and cellular level.

7.
Mol Cancer Res ; 9(11): 1449-61, 2011 Nov.
Article in English | MEDLINE | ID: mdl-21875931

ABSTRACT

Expression of ADAM12 is low in most normal tissues but is markedly increased in numerous human cancers, including breast carcinomas. We have previously shown that overexpression of ADAM12 accelerates tumor progression in a mouse model of breast cancer (PyMT). In this study, we found that ADAM12 deficiency reduces breast tumor progression in the PyMT model. However, the catalytic activity of ADAM12 seems to be dispensable for its tumor-promoting effect. Interestingly, we show that ADAM12 endogenously expressed in tumor-associated stroma in the PyMT model does not influence tumor progression, but that ADAM12 expression by tumor cells is necessary for tumor progression in these mice. This finding is consistent with our observation that in human breast carcinoma, ADAM12 is almost exclusively located in tumor cells and, only rarely, seen in the tumor-associated stroma. We hypothesized, however, that the tumor-associated stroma may stimulate ADAM12 expression in tumor cells, on the basis of the fact that TGF-ß1 stimulates ADAM12 expression and is a well-known growth factor released from tumor-associated stroma. TGF-ß1 stimulation of ADAM12-negative Lewis lung tumor cells induced ADAM12 synthesis, and growth of these cells in vivo induced more than 200-fold increase in ADAM12 expression. Our observation that ADAM12 expression is significantly higher in the terminal duct lobular units (TDLU) adjacent to human breast carcinoma compared with TDLUs found in normal breast tissue supports our hypothesis that tumor-associated stroma triggers ADAM12 expression.


Subject(s)
ADAM Proteins/biosynthesis , Breast Neoplasms/metabolism , Breast Neoplasms/pathology , Membrane Proteins/biosynthesis , ADAM Proteins/deficiency , ADAM Proteins/genetics , ADAM Proteins/metabolism , ADAM12 Protein , Animals , Breast Neoplasms/genetics , Cell Growth Processes/physiology , Cell Line, Tumor , Disease Progression , Female , Humans , Immunohistochemistry , Male , Mammary Neoplasms, Experimental/genetics , Mammary Neoplasms, Experimental/metabolism , Mammary Neoplasms, Experimental/pathology , Membrane Proteins/deficiency , Membrane Proteins/genetics , Membrane Proteins/metabolism , Mice , Mice, Inbred C57BL , Mice, Knockout , Stromal Cells/metabolism , Stromal Cells/pathology
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