Untargeted Metabolomic Analysis of Leaves and Roots of Jatropha curcas Genotypes with Contrasting Levels of Phorbol Esters.

AIMS: Phorbol esters (PE) are toxic diterpenoids accumulated in physic nut (Jatropha curcas L.) seed tissues. Their biosynthetic pathway remains unknown, and the participation of roots in this process may be possible. Thus, we set out to study the deposition pattern of PE and other terpenoids in roots and leaves of genotypes with detected (DPE) and not detected (NPE) phorbol esters based on previous studies. OUTLINE OF DATA RESOURCES: We analyzed physic nut leaf and root organic extracts using LC-HRMS. By an untargeted metabolomics approach, it was possible to annotate 496 and 146 metabolites in the positive and negative electrospray ionization modes, respectively. KEY RESULTS: PE were detected only in samples of the DPE genotype. Remarkably, PE were found in both leaves and roots, making this study the first report of PE in J. curcas roots. Furthermore, untargeted metabolomic analysis revealed that diterpenoids and apocarotenoids are preferentially accumulated in the DPE genotype in comparison with NPE, which may be linked to the divergence between the genotypes concerning PE biosynthesis, since sesquiterpenoids showed greater abundance in the NPE. UTILITY OF THE RESOURCE: The LC-HRMS files, publicly available in the MassIVE database (identifier MSV000092920), are valuable as they expand our understanding of PE biosynthesis, which can assist in the development of molecular strategies to reduce PE levels in toxic genotypes, making possible the food use of the seedcake, as well as its potential to contain high-quality spectral information about several other metabolites that may possess biological activity.

Morphological and ultrastructural changes in fungal agents after LASER application.

BACKGROUND: Onychomycosis is a fungal nail infection of difficult treatment due to the fungal survival capacity and reduced number of effective therapies. The present study aimed to isolate fungal agents that cause onychomycosis in immunocompetent patients and evaluate how LASER treatments affect the growth and ultrastructure of isolates. METHODS: In total, 21 patients with positive direct microscopic examination (DME) for onychomycosis had nail samples collected for cultivation and phenotypic identification of microorganisms. From these patients, 12 underwent LASER treatment, divided in Group 1 (n = 5) treated with Nd: YAG 1,064 nm, and Group 2 (n = 7) treated with Nd: YAG 1,064 nm + Er: YAG 2,940 nm + topical isoconazole. Transmission Electron Microscopy (TEM) was performed to evaluate ultrastructural changes after treatment. RESULTS: DME, cultivation, and phenotypic identification showed that the most identified fungus was Trichophyton rubrum spp. After LASER therapy, sample cultivation showed alterations in the fungal morphology with reduction of hyphae, conidia, and reproductive structures. Alterations in fungal cell wall structure, cytoplasm density, and organelles were observed by TEM. CONCLUSION: LASER irradiation causes changes in the fungal cells, especially in the number of hyphae and the presence of conidia. In addition, it affects fungal growth and reproduction capacity, which interferes with their infection ability and virulence.

A peculiar case of onychomycosis caused by Cladosporium halotolerans.

A 49-year-old patient with changes in the nails of the hallux for 10 years was diagnosed with onychomycosis. The identity of the causative agent was confirmed as Cladosporium halotolerans from the Cladosporium sphaerospermum species complex using molecular techniques. MALDI-TOF identified the agent as C. sphaerospermum complex species. Overall, species such as onychomycosis agents should attract special attention to avoid mistakes in the identification process while considering a probable contaminant as responsible for the disease. These species deserve attention since there are rare descriptions of them as causes of onychomycosis. It is important to recognize them as causes of disease and not just as a probable contaminant.

Retrieving records of a rare and threatened shark in a mosaic of marine-protected areas of southeastern Brazil.

In this study the authors use the Fishers ecological knowledge (FEK) from the south coast of the São Paulo State, in southeastern Brazil, to recover records of Atlantic nurse shark (Ginglymostoma cirratum), a threatened with extinction species, in a mosaic of marine-protected areas (MPAs) of the south coast of São Paulo, in southeastern Brazil, in the southernmost distribution of the species in the Southwest Atlantic Ocean. For half a century, in the study area only one male of G. cirratum was officially recorded, in 1967. Retrieving records from artisanal fishers, recreational anglers, fishing guides and spearfishers added 30 more records of G. cirratum, including 2 recent captures (February/2022 and May/2022), especially around coastal islands that are covered by MPAs. Two uncommon fishing techniques, but which provided the highest number of records for the species, were documented. These are fishing nets and small longlines adapted for fishing close to the rocks, being an apparently traditional activity of a few natives of the region. As Brazil has a long history of intense catches of threatened elasmobranchs and problems with fisheries monitoring, the consideration of the FEK in the fisheries monitoring carried out by the authorities can be useful to promote improvements in data collection, especially of rare and endangered species such as G. cirratum. The strengthening of the protection of the MPAs and the articulation of research and management institutions with native people and tourists who use these areas should also be considered.

Proteomic changes associated with the development of açaí (Euterpe oleracea Mart.) seeds.

Açaí palm (Euterpe oleracea Mart.) seeds are a rich source of mannans, which can be used to generate bioethanol or be converted to high-value D-mannose, in addition to being a source of polyphenols with beneficial health properties. Here, we present a quantitative proteome dataset of açaí seeds at four stages of development (S1, S2, S3, and S4 stages), in which 2465 high confidence proteins were identified and 524 of them show statistically different abundance profiles during development. Several enzymes involved in the biosynthesis of nucleotide-sugars were quantified, especially those dedicated to the formation of GDP-mannose, which showed an increase in abundance between stages S1 and S3. Our data suggest that linear mannans found abundantly in endosperm cell walls are initially deposited as galactomannans, and during development lose the galactosyl groups. Two isoforms of alpha-galactosidase enzymes showed significantly increased abundances in the S3 and S4 stages. Additionally, we quantified the enzymes participating in the central pathway of flavonoid biosynthesis responsible for the formation of catechin and epicatechin, which are subunits of procyanidins, the main class of polyphenols in the açaí seeds. These proteins showed the same pattern of deposition, in which higher abundances were seen in the S1 and S2 stages.

A peculiar case of onychomycosis caused by Cladosporium halotolerans

ABSTRACT A 49-year-old patient with changes in the nails of the hallux for 10 years was diagnosed with onychomycosis. The identity of the causative agent was confirmed as Cladosporium halotolerans from the Cladosporium sphaerospermum species complex using molecular techniques. MALDI-TOF identified the agent as C. sphaerospermum complex species. Overall, species such as onychomycosis agents should attract special attention to avoid mistakes in the identification process while considering a probable contaminant as responsible for the disease. These species deserve attention since there are rare descriptions of them as causes of onychomycosis. It is important to recognize them as causes of disease and not just as a probable contaminant.

Indirect evidence of following association between golden dorados (Salminus brasiliensis) and green anacondas (Eunectes murinus) in a Clearwater river of Midwest Brazil / Evidência indireta de associação de seguidor entre dourado (Salminus brasiliensis) e sucuri-verde (Eunectes murinus) em um rio de águas claras do Centro-Oeste do Brasil

Abstract On four occasions, the golden dorado (Salminus brasiliensis) was recorded following the green anaconda (Eunectes murinus) in a clearwater river of Midwest Brazil. These observations were considered as an indirect evidence of a following association known as "nuclear-follower feeding association", a condition in which the follower approach the nuclear when it somehow disturbs the substrate and form sediment clouds while foraging, taking the opportunity to feed during this situation. However, no direct observations of golden dorados getting some benefit from the activity of the green anacondas to feed were made. Nevertheless, as there is a varied list of vertebrates considered as nuclear species in the clearwater rivers of Midwest Brazil, it is to be expected that future observations may provide unusual information about nuclear-follower feeding association between fish and snakes in the Neotropics.

Resumo Em quatro ocasiões, o dourado (Salminus brasiliensis) foi registrado seguindo a sucuri-verde (Eunectes murinus) em um rio de águas claras do Centro-Oeste do Brasil. Essas interações foram consideradas como uma evidência indireta de uma associação de seguidor conhecida como "associação de alimentação nuclear-seguidor", uma condição na qual o seguidor se aproxima da espécie nuclear quando esta de alguma forma perturba o substrato e/ou forma nuvens de sedimentos enquanto forrageia, aproveitando a oportunidade para se alimentar durante essa situação. No entanto, observações diretas de dourados obtendo algum benefício da atividade das sucuris para se alimentar não foram feitas. No entanto, como há uma lista variada de vertebrados considerados como espécies nucleares nos rios de águas claras do Centro-Oeste do Brasil, é de se esperar que observações futuras possam fornecer informações incomuns sobre associações do tipo "nuclear-seguidor" entre peixes e serpentes na região Neotropical.

Phenolic Profile and Antioxidant Properties in Extracts of Developing Açaí (Euterpe oleracea Mart.) Seeds.

We investigated changes in the phenolic profile and antioxidant properties in the extracts of developing seeds of açaí (Euterpe oleracea). Four developmental stages were evaluated, with earlier stages displaying higher antioxidant activity and polyphenols content, while mass spectrometry analysis identified procyanidins (PCs) as the major components of the extracts in all stages. B-type PCs varied from dimers to decamers, with A-type linkages in a smaller number. Extracted PCs decreased in average length from 20.5 to 10.1 along seed development. PC composition indicated that (-)-epicatechin corresponded to over 95% of extension units in all stages, while (+)-catechin presence as the starter unit increased from 42 to 78.8% during seed development. This variation was correlated to the abundance of key enzymes for PC biosynthesis during seed development. This study is the first to report PC content and composition variations during açaí seed development, which can contribute to studies on the plant's physiology and biotechnological applications.

Mating behavior of the lemon shark, Negaprion brevirostris (Carcharhiniformes: Carcharhinidae), as revealed by citizen science in the Equatorial Atlantic Ocean / Comportamiento de apareamiento del tiburón limón Negaprion brevirostris (Carcharhiniformes: Carcharhinidae), revelado por la ciencia ciudadana en el Océano Atlántico Ecuatorial

Introduction: Knowledge on the mating behavior and habitat requirements of large sharks, including the lemon shark, Negaprion brevirostris, is scarce, hampering conservation efforts. Objective: To describe an area in the Equatorial Atlantic used as a mating ground by N. brevirostris, as well as part of the species pre-copulatory behaviors based on citizen reports. Methods: Between 2004 and 2019, recreational divers, dive guides and rangers from the Marine Protected Area (MPA) in Fernando de Noronha Archipelago (FEN) recorded courtship behaviour, females with mating scars, pregnant females, and adult males. Results: N. brevirostris was recorded mating in shallow waters (0.5-2 m deep) during the austral summer (December to March). A specific location in the MPA, Buraco da Raquel lagoon, was the main aggregation and mating site for adult N. brevirostris in FEN. Conclusions: Citizen science records allowed the identification of shallow waters as key sites for the reproduction of this shark in FEN. Results highlight the potential of citizen science contributions to knowledge of sharks in nature and show MPAs as essential for habitat conservation of sharks with decreasing populations along the Brazilian coast, such as N. brevirostris. We present management recommendations to protect N. brevirostris there and elsewhere.

Introducción: El conocimiento sobre el comportamiento reproductivo y requisitos de hábitat de apareamiento de los tiburones grandes, incluido el tiburón limón, Negaprion brevirostris, es escaso, lo que dificulta los esfuerzos de conservación. Objetivo: Describir un área en el Océano Atlántico ecuatorial utilizada como zona de apareamiento y las interacciones precopulatorias del tiburón limón con base en informes proporcionados por ciencia ciudadana. Métodos: Buzos recreativos, guías de buceo y guardaparques del Área Marina Protegida (AMP) en el archipiélago Fernando de Noronha (FEN) llevaron registros de comportamientos de cortejo, hembras con cicatrices de apareamiento, hembras preñadas y machos adultos, entre 2004 y 2019. Resultados: Las aguas poco profundas entre 0.5 y 2 m de profundidad son utilizadas como áreas de apareamiento por N. brevirostris durante el verano austral (diciembre a marzo). Un lugar específico, dentro del AMP (laguna de Buraco da Raquel), fue identificado como el principal sitio de agregación y apareamiento de adultos de N. brevirostris en FEN. Conclusiones: Registros de ciencia ciudadana permitieron identificar aguas poco profundas como sitios clave para la reproducción de este tiburón en FEN. Los resultados resaltan el potencial de las contribuciones de la ciencia ciudadana al conocimiento de los tiburones en la naturaleza y muestran que las AMP son esenciales para la conservación del hábitat de tiburones con poblaciones decrecientes a lo largo de la costa brasileña, como N. brevirostris. Presentamos recomendaciones de gestión para proteger a N. Brevirostri, allí y en otros lugares.

Laser Q-Switched para o tratamento da melanose labial na síndrome de Peutz-Jeghers / Q-Switched Laser for the treatment of mucocutaneous pigmentation on Peutz-Jeghers Syndrome

A síndrome de Peutz-Jeghers (SPJ) é uma doença autossômica dominante, rara, em que há mutação no gene supressor tumoral, havendo maior predisposição para neoplasias, principalmente do trato gastrointestinal. As primeiras manifestações iniciam-se na infância com a presença de melanose mucocutânea e, posteriormente, surgem os pólipos hamartomatosos gastrointestinais. Apresentaremos o caso de uma paciente feminina, jovem, cujas manifestações iniciais da SPJ iniciaram-se na infância sob a forma de melanose cutânea. O tratamento dessas lesões foi realizado com três sessões com os lasers Nd:YAG Q-Switched 1064nm e KTP Q-Switched 532nm, evoluindo com excelente resposta terapêutica e sem recidiva

Peutz-Jeghers syndrome (PJS) is a rare, autosomal dominant disease where there is a mutation in the tumor suppressor gene, with a greater predisposition to neoplasms, especially of the gastrointestinal tract. The first manifestations begin during childhood with the presence of mucocutaneous melanosis and, later, gastrointestinal hamartomatous polyps. We describe a case of a young woman whose initial PJS manifestation started during her childhood with cutaneous melanosis. Three sessions with the Q-switched 1064nm Nd:YAG and 532nm KTP lasers were performed to treat the melanosis with excellent results and without recurrence.

Monitoring casbene synthase in Jatropha curcas tissues using targeted proteomics.

BACKGROUND: Casbene synthase (CS) is responsible for the first committed step in the biosynthesis of phorbol esters (PE) in the Euphorbiaceae. PE are abundant in the seeds of the biofuel crop Jatropha curcas and its toxicity precludes the use of the protein-rich cake obtained after oil extraction as an animal feed and the toxicity of the fumes derived from burning PE containing biofuel is also a matter of concern. This toxicity is a major hindrance to exploit the potential of this crop as a source of raw material to produce biodiesel. For this reason, the current research on J. curcas is mainly focused on the understanding of the biosynthesis and site of synthesis of PE, as an avenue for the development of genotypes unable to synthesize PE in its seeds. RESULTS: Here, we present targeted proteomics assays (SRM and PRM) to detect and quantify CS in leaves, endosperm, and roots of two J. curcas genotypes with contrasting levels of PE. These assays were based on the use of reference isotopic labeled synthetic peptides (ILSP) predicted from 12 gene models of CS from the J. curcas genome. CONCLUSION: Our targeted proteomics methods were able to detect and quantify, for the first time, CS gene products and demonstrate the distribution of CS isoforms only in roots from J. curcas genotypes with a high and low concentration of PE. These methods can be expanded to monitor CS, at the protein level, in different tissues and genotypes of J. curcas.

The marine catfish Genidens barbus (Ariidae) fisheries in the state of São Paulo, southeastern Brazil: diagnosis and management suggestions.

In this study we analyzed data on fishing landings of Genidens barbus in the state of São Paulo, Brazil, from 2000 to 2014. An estimation of the total production was obtained through the analysis of 781,856 landings, among which 87% were categorized as artisanal and 13% as industrial. The abundance index showed some stability in the period. However, due to the high number of production units, the fishing effort need to be maintained, given that there is a risk that increased production might affect the abundance of G. barbus. Thus, as alternatives to maintaining marine catfish exploitation in southeastern Brazil under control, the following management actions can be suggested: i) prohibition of fishing activity by the industrial sector; ii) strengthening of inspection of the fleet that is not allowed to participate in the marine catfish fisheries, with emphasis on purse seiners; and iii) maintenance of a closed season for G. barbus, performing an adaptive management of fishing prohibition according to the reproductive biology of the species and with the support of artisanal fishers. These measures have the aim of promoting sustainable exploitation of G. barbus, especially through small-scale fisheries in southeastern Brazil.

Proteome dynamics of the cotyledonary haustorium and endosperm in the course of germination of Euterpe oleracea seeds.

The role of the cotyledonary haustorium (CH) in the mobilization of nutrient reserves in the endosperm of species of the palm family Arecaceae is a moot question. To shed light on this matter, we present here an analysis of the quantitative proteome changes associated with four developmental stages of CH and three of endosperm during germination. Together, a total of 1965 proteins were identified, being 1538 in the CH and 960 in the endosperm. Both in the CH and endosperm proteomes, we observed an increase in the diversity of hydrolases as the CH and endosperm develops. Qualitative proteomics analysis of four CH developmental stages indicated that each stage is populated by a unique set of proteins and the quantitative analysis showed an increase in the relative abundance of hydrolases, particularly mannan degrading enzymes, as development progresses. These results add weight to the hypothesis that the CH in the seeds of E. oleraceaacts both as a conduit of carbon and nitrogen sources generated by the hydrolysis of the reserves in the endosperm and as a source of hydrolases that will contribute to the mobilization of these reserves.

Proteome Dynamics of the Developing Açaí Berry Pericarp (Euterpe oleracea Mart.).

Quantitative proteome analysis of four developmental stages of pericarp tissues of the açaí berry (Euterpe oleracea Mart.) was performed by the isobaric labeling of peptides with iTRAQ 4-plex, hydrophilic interaction liquid chromatography pre-fractionation of labeled peptides, and high-performance mass spectrometry analysis. This analysis resulted in the identification of 4286 proteins, of which 476 presented differential abundance between the stages. The differential abundance of these proteins was seen to be coordinated with the metabolic demands during cell division, lignification, and cell expansion at developmental stages 1 and 2 as well as phenolic acid accumulation and metabolic changes in the fruit maturation at developmental stages 3 and 4. The distinct accumulation of anthocyanins observed in the pericarp at developmental stage 4 was correlated with the increase in abundance of some key biosynthetic enzymes, such as leucoanthocyanidin dioxygenase, anthocyanidin O-3-glycosyltransferase, and UDP-glycosyltransferase. Here, evidence is also provided for the presence in the açaí berry of secondary metabolites not previously described in açaí, such as pterostilbene, matairesinol, and furaneol. Together, these results will pave the way for studies aimed at the genetic improvement of the nutritional properties of this important fruit crop.

Association of preharvest management with oxidative protection and enzymatic browning in minimally processed cassava.

The aim of this study was to examine oxidative protection and enzymatic browning in the storage of minimally processed cassava and their relationship with population density and harvest age. Population densities were 1.0, 1.25, 1.5, and 1.75 plants m-2 . After being harvested at 300, 360, or 420 days after planting, cassava were minimally processed and stored at 5 ± 2°C. It was observed that superoxide dismutase (SOD), catalase (CAT), and peroxidase (POD) play key roles in the tolerance of young roots to browning. Planting density, however, does not appear to be a key factor modulating the activity of the enzymes studied. PRACTICAL APPLICATIONS: Younger harvested cassava roots, harvested at 300 days, are more tolerant to enzymatic browning. This appears to be in part due to enzymatic activity modulation of the SOD, CAT, and POD enzymes. In addition, it has been demonstrated that agronomic techniques aimed at increasing productivity, such as increasing the planting density of cassava, do not alter the biomarkers of postharvest quality. In summary, evidence that field management may be an efficient approach to improving the conservation of minimally processed cassava is provided. We believe that the findings of this paper will be of great interest regarding the influence of field management on the postharvest quality of freshly cut cassava and will also provide applicable results relating to its production chain.

Biotelemetry reveals migratory behaviour of large catfish in the Xingu River, Eastern Amazon.

We used a combination of radio and acoustic telemetry to assess the movements of large catfish (Pimelodidae) in the Xingu River, a clearwater tributary of the Amazon River in Brazil. A total of 121 Phractocephalus hemioliopterus and 61 Pseudoplatystoma punctifer were tagged for monitoring within a 685 km segment, including the Belo Monte Hydroelectric Complex (BMHC), between February 2013 and July 2015. Long distance upstream movements were detected for P. hemioliopterus (up to 347 km) and for P. punctifer (up to 164 km) mainly during the transition between dry season and the rising water period. Both species moved through a long segment of rapids previously thought to function as barriers to migration. Several individuals exhibited long-distance bidirectional movements. Some tagged fish never left the release zone, indicating mortality, tag loss or resident individuals, which would characterize partial migration. The findings show evidence of migratory behaviour for large catfish within the Xingu River, emphasizing the influence of the hydrologic cycle on their movements. As part of the study area has become partially dewatered due to the BMHC, findings support the need of adequate management strategies to allow the movements of large catfish between spawning and feeding sites in the Xingu River.

Use of mucus as a non-invasive sampling method for DNA barcoding of stingrays and skates (batoid elasmobranchs).

In this study we tested the use of mucus from five species of Neotropical marine batoid elasmobranchs to extract genomic DNA for barcoding and phylogenetic analysis. The DNA from all individuals sampled was successfully amplified and sequenced for molecular barcode, allowing 99-100% accuracy to the species level. This method proved to provide reliable and good-quality DNA for barcoding and phylogenetic analysis of Neotropical elasmobranchs, through rapid handling and with low disturbance to animals.

The surprising "B-side": description of a new foraging tactic for the pearl cichlid, Geophagus brasiliensis, in a coastal stream of the Atlantic Forest / O surpreendente "lado-B": descrição de uma nova tática de forrageamento para o acará, Geophagus brasiliensis, em um riacho costeiro da Mata Atlântica

Abstract: A new foraging tactic for the pearl cichlid, Geophagus brasiliensis, is described from underwater observations performed in a coastal stream of the Atlantic Forest, Southeastern Brazil. Named "shift picking", the foraging tactic involved the manoeuvering of leaves, wood twigs and tree bark present in the substrate, with fish using its mouth to turn objects and uncover macroinvertebrates adhered to the underside of the object being picked ("B-side"). The object-shifting behaviour is rarely reported for fish and the present description seems to be the first record for a freshwater species of South America.

Resumo: Uma nova tática de forrageamento do acará, Geophagus brasiliensis, é descrita a partir de observações subaquáticas realizadas em um riacho costeiro da Mata Atlântica, Sudeste do Brasil. Chamada de "virar para pegar", a tática de forrageamento envolve o movimento de folhas, galhos e cascas de árvores presentes no substrato, com os peixes usando a boca para virar objetos e expor macroinvertebrados aderidos à parte de baixo dos objetos explorados ("lado B"). O comportamento de mover objetos é raramente relatado e o presente trabalho parece ser o primeiro registro para uma espécie de água doce da América do Sul.

Alopecia areata difusa e a teoria dos autoantígenos associada a melanogênese / Diffuse alopecia areata and the autoantigens-melanogenesis association theory

A alopecia areata é afecção crônica dos folículos pilosos e das unhas, de etiologia desconhecida, que determina queda dos cabelos e/ou pelos. Apresenta-se sob diversas formas clínicas, sendo atípica a forma difusa, em que há perda aguda e difusa de cabelos. Aceita-se que exista uma base autoimune órgão-específica mediada por células T na alopecia areata, e estudos apontam que o autoantígeno é associado ao melanócito. Relatamos o caso de paciente que apresentou a forma difusa com preservação dos fios em canície.

Alopecia areata is a chronic condition of hair follicles and nails with unknown etiology, which causes hair loss. It emerges in several clinical types, with the diffuse form, where there is acute and diffuse hair loss, being atypical. It is generally accepted that there is a T-cell mediated, organ-specific autoimmune base in alopecia areata and studies indicate that the autoantigen is associated with melanocytes. The authors of the present paper report the case of a patient who had the diffuse form of alopecia areata, with preservation of the gray hair strands