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1.
Br J Nurs ; 30(14): S24-S32, 2021 Jul 22.
Article in English | MEDLINE | ID: mdl-34288746

ABSTRACT

HIGHLIGHTS: 2% taurolidine catheter lock solution without additives is safe and efficient. CRBSI and dysfunction rates compare favorably against other studies in hemodialysis. BACKGROUND: In hemodialysis patients, catheter-related bloodstream infection (CRBSI) and catheter dysfunction are common and cause significant morbidity, mortality, and costs. Catheter lock solutions reduce CRBSI and catheter dysfunction rates, but solutions containing heparin, citrate, or antibiotics are associated with adverse effects. Due to its antimicrobial and antithrombotic properties and benign safety profile, taurolidine is suitable for use in catheter lock solutions. In this study the effectiveness and safety of a catheter lock solution containing 2% taurolidine without citrate or heparin (TauroSept®, Geistlich Pharma AG, Wolhusen, Switzerland) in hemodialysis patients were investigated for the first time. METHODS: Data from 21 patients receiving chronic hemodialysis via tunneled central venous catheters with 2% taurolidine solution as a catheter lock were analyzed in a single-center retrospective study and compared with the existing literature in a review. The primary endpoint was CRBSI rate. Secondary endpoints included catheter dysfunction, treatment, and costs; catheter technical problems, resolution, and costs; and adverse events. Data were compared to outcomes with standard lock solutions in the literature. RESULTS: No CRBSIs occurred during the observation period of 5,639 catheter days. The catheter dysfunction rate was 0.71 per 1,000 catheter days, and the catheter dysfunction treatment costs were CHF (Swiss Franc) 543 per patient. No technical problems or adverse events related to the use of 2% taurolidine-containing catheter lock solution were observed. These results compare favorably with other catheter lock solutions. CONCLUSIONS: A solution containing 2% taurolidine seems suitable as a hemodialysis catheter lock. In a Swiss cohort, it prevented CRBSI, limited catheter dysfunction, and was cost-efficient.


Subject(s)
Bacteremia , Catheter-Related Infections , Central Venous Catheters , Taurine/analogs & derivatives , Thiadiazines , Bacteremia/etiology , Bacteremia/prevention & control , Catheter-Related Infections/prevention & control , Central Venous Catheters/adverse effects , Equipment Failure , Humans , Renal Dialysis/instrumentation , Retrospective Studies , Switzerland , Taurine/therapeutic use , Thiadiazines/therapeutic use
2.
Clin Immunol ; 194: 67-74, 2018 09.
Article in English | MEDLINE | ID: mdl-30018024

ABSTRACT

Calcineurin inhibitors (CNIs) are a cornerstone of the current treatment in solid organ transplantation and autoimmune disease. However, CNIs also bear deleterious effects as they cause glomerular and tubulointerstitial fibrosis in the kidney. We recently identified Y-box protein-1 (YB-1) as a novel downstream effector of CNI-signaling in the cytoplasm of glomerular cells. In the present study, we corroborate the pro-fibrotic role of YB-1 in glomeruli of patients under CNI-treatment. Such effects in glomeruli are significantly mitigated in CNI-treated mice with half-normal YB-1 expression (Yb1+/-). Surprisingly, in the tubulointerstitium we observe an opposite role of the CNI-YB-1 axis. Here, YB-1 is predominantly located to the nuclei and represses transcription of several extracellular matrix genes. Consistently, CNI-treatment in Yb1+/- mice markedly increases pro-fibrotic changes in the tubulointerstitium. In summary, our data provide evidence that fibrotic CNI-induced YB-1 effects in glomerular cells need to be contrasted with beneficial anti-fibrotic effects in the tubulointerstitium.


Subject(s)
Calcineurin Inhibitors/adverse effects , Fibrosis/metabolism , Kidney Diseases/chemically induced , Kidney Diseases/metabolism , Transcription Factors/metabolism , Animals , Extracellular Matrix/genetics , Extracellular Matrix/metabolism , Female , Fibrosis/genetics , Kidney/drug effects , Kidney/metabolism , Kidney Diseases/genetics , Kidney Glomerulus/metabolism , Kidney Transplantation/methods , Mice , Transcription, Genetic/drug effects , Transcription, Genetic/genetics
3.
J Pathol ; 229(5): 672-84, 2013 Apr.
Article in English | MEDLINE | ID: mdl-23192593

ABSTRACT

Mesangioproliferative glomerulonephritis is the most common nephritis worldwide. We examined the effects of low- and high-dose telmisartan, an angiotensin II receptor blocker, in rats with progressive anti-Thy1.1 mesangioproliferative glomerulonephritis in a clinically relevant situation of established renal damage. Uninephrectomized nephritic rats were randomized on day 28 to remain untreated (control treatment; CT), or to receive low- (0.1 mg/kg/day, LT) or high-dose telmisartan (10 mg/kg/day, HT), hydrochlorothiazide + hydralazine (8 + 32 mg/kg/day, HCT + H), or atenolol (100 mg/kg/day, AT). CT and LT rats were hypertensive, whereas HT, HCT + H and AT treatment normalized blood pressures. On day 131, despite similar blood lowering effects, only HT, but not AT or HCT + H, prevented loss of renal function and reduced proteinuria compared to CT. Only HT potently ameliorated glomerulosclerosis, tubulointerstitial damage, cortical matrix deposition, podocyte damage and macrophage infiltration. HT reduced cortical expression of platelet derived growth factor receptor-α and -ß as well as transforming growth factor-ß1. LT exhibited minor but significant efficacy even in the absence of antihypertensive effects. Transcript array analyses revealed a four-fold down-regulation of renal cortical chemokine (C-C motif) receptor 6 (CCR6) mRNA by HT, which was confirmed at the protein level. Silencing of CCR6 did not alter podocyte function in vitro, thus indicating a predominant role in the tubulo-interstitium. In human kidney biopsies, CCR6 mRNA and mRNA of its ligand chemokine (C-C motif) ligand 20 was up-regulated in patients with progressive IgA nephropathy compared to stable disease. Thus, delayed treatment with high-dose telmisartan exerted a pronounced benefit in progressive mesangioproliferative glomerulonephritis, which extended beyond that of equivalent blood pressure lowering. We identified down-regulation of platelet-derived growth factor receptors and CCR6 as potential mediators of telmisartan-related renoprotection. CCR6 may also regulate the renal outcome in human mesangioprolfierative glomerulonephritis.


Subject(s)
Angiotensin II Type 1 Receptor Blockers/pharmacology , Antihypertensive Agents/pharmacology , Benzimidazoles/pharmacology , Benzoates/pharmacology , Glomerular Mesangium/drug effects , Glomerulonephritis, Membranoproliferative/drug therapy , Angiotensin II Type 1 Receptor Blockers/administration & dosage , Animals , Antihypertensive Agents/administration & dosage , Atenolol/pharmacology , Benzimidazoles/administration & dosage , Benzoates/administration & dosage , Blood Pressure/drug effects , Cell Dedifferentiation/drug effects , Cell Line , Chemokine CCL20/genetics , Cytoprotection , Disease Models, Animal , Fibrosis , Gene Expression Profiling , Gene Expression Regulation , Glomerular Mesangium/metabolism , Glomerular Mesangium/pathology , Glomerular Mesangium/physiopathology , Glomerulonephritis, Membranoproliferative/etiology , Glomerulonephritis, Membranoproliferative/genetics , Glomerulonephritis, Membranoproliferative/metabolism , Glomerulonephritis, Membranoproliferative/pathology , Glomerulonephritis, Membranoproliferative/physiopathology , Humans , Hydralazine/pharmacology , Hydrochlorothiazide/pharmacology , Hypertension/drug therapy , Hypertension/metabolism , Hypertension/physiopathology , Inflammation/drug therapy , Inflammation/metabolism , Inflammation/physiopathology , Isoantibodies , Macrophages/drug effects , Macrophages/metabolism , Macrophages/pathology , Male , Mice , Nephrectomy , Podocytes/drug effects , Podocytes/metabolism , Podocytes/pathology , Proteinuria/drug therapy , Proteinuria/metabolism , Proteinuria/physiopathology , RNA Interference , RNA, Messenger/metabolism , Rats , Rats, Wistar , Receptors, CCR6/genetics
4.
Am J Pathol ; 179(4): 1756-67, 2011 Oct.
Article in English | MEDLINE | ID: mdl-21854746

ABSTRACT

Matricellular proteins participate in the pathogenesis of chronic kidney diseases. We analyzed glomerular gene expression profiles from patients with proteinuric diseases to identify matricellular proteins contributing to the progression of human nephropathies. Several genes encoding matricellular proteins, such as SPARC, THBS1, and CTGF, were induced in progressive nephropathies, but not in nonprogressive minimal-change disease. Periostin showed the highest induction, and its transcript levels correlated negatively with glomerular filtration rate in both glomerular and tubulointerstitial specimen. In well-preserved renal tissue, periostin localized to the glomerular tuft, the vascular pole, and along Bowman's capsule; no signal was detected in the tubulointerstitial compartment. Biopsies from patients with glomerulopathies and renal dysfunction showed enhanced periostin expression in the mesangium, tubular interstitium, and sites of fibrosis. Periostin staining correlated negatively with renal function. α-smooth muscle actin-positive mesangial and interstitial cells localized close to periostin-positive sites, as indicated by co-immunofluorescence. In vitro stimulation of mesangial cells by external addition of TGF-ß1 resulted in robust induction of periostin. Addition of periostin to mesangial cells induced cell proliferation and decreased the number of cells expressing activated caspase-3, a marker of apoptosis. These human data indicate for the first time a role of periostin in glomerular and interstitial injury in acquired nephropathies.


Subject(s)
Cell Adhesion Molecules/metabolism , Kidney Glomerulus/metabolism , Kidney Glomerulus/pathology , Adolescent , Adult , Aged , Aged, 80 and over , Apoptosis , Biopsy , Cell Adhesion Molecules/genetics , Cell Proliferation , Female , Fibrosis , Humans , Immunohistochemistry , Kidney Failure, Chronic/genetics , Male , Mesangial Cells/metabolism , Mesangial Cells/pathology , Middle Aged , Oligonucleotide Array Sequence Analysis , Protein Transport , Proteinuria/genetics , Reverse Transcriptase Polymerase Chain Reaction , Tissue Preservation , Transcription, Genetic , Young Adult
5.
Mod Pathol ; 24(1): 98-107, 2011 Jan.
Article in English | MEDLINE | ID: mdl-20890272

ABSTRACT

The B-cell survival factors APRIL and BLyS are important for B-cell maturation and activation and contribute to human autoimmune diseases. Interference with B-cell function by targeting these molecules is currently being investigated in large clinical trials for systemic lupus erythematosus. The local expression patterns of APRIL and BLyS have not been investigated in detail in kidneys with lupus nephritis. We studied the mRNA expression of APRIL, BLyS, and the corresponding receptors BCMA, TACI, and BAFF-R in microdissected human biopsies with proliferative lupus nephritis (n=25) and compared it with pretransplant biopsies of living donors (n=9). APRIL and BLyS mRNA levels were significantly higher in glomeruli of patients with proliferative lupus nephritis (12- and 30-fold, respectively). Tubulointerstitial expression of APRIL, BLyS, BCMA, and TACI was also significantly elevated. To localize the respective proteins in the kidney, APRIL, BLyS, and BAFF-R were studied by immunohistochemistry in renal biopsies with proliferative (n=21) or membranous (n=8) lupus nephritis. APRIL was prominently expressed in glomeruli with proliferative, but not membranous, lupus nephritis. The staining pattern was consistent with mesangial cells. A prominent accumulation of CD68-positive cells was present in glomeruli in association with APRIL expression. APRIL, BLyS, and BAFF-R were also expressed in interstitial inflammatory cell accumulation. This is the first study, which details local expression of APRIL and BLyS in glomeruli and tubulointerstitium of human proliferative lupus nephritis. This information might help define intrarenal effects of APRIL and BLyS inhibition in human lupus nephritis.


Subject(s)
B-Cell Activating Factor/metabolism , B-Cell Activation Factor Receptor/genetics , Lupus Nephritis/genetics , Tumor Necrosis Factor Ligand Superfamily Member 13/genetics , Adolescent , Adult , Aged , B-Cell Activating Factor/genetics , B-Lymphocytes , Cell Survival , Female , Gene Expression , Glomerulonephritis, Membranoproliferative/genetics , Glomerulonephritis, Membranoproliferative/pathology , Glomerulonephritis, Membranous/genetics , Glomerulonephritis, Membranous/pathology , Humans , Immunohistochemistry , Kidney Glomerulus/metabolism , Kidney Glomerulus/pathology , Lupus Nephritis/pathology , Male , Microdissection , Middle Aged , RNA, Messenger/genetics , Young Adult
6.
Kidney Int ; 78(1): 38-47, 2010 Jul.
Article in English | MEDLINE | ID: mdl-20393451

ABSTRACT

Renal proximal tubular epithelial cells, a target of infiltrating T cells during renal allograft rejection, may be protected from this injury by the cell surface protein CD274 (also termed PD-L1 for programmed death ligand 1). The co-inhibitory molecules PD-L1 (CD274) and PD-L2 (CD273) are ligands of PD-1 (programmed death 1; CD279). Here we determine the functional role of PD-1/PD-L pathways in human renal allograft rejection. Treatment of human primary tubular epithelial cells with interferon-beta and -gamma caused a dose-dependent and synergistic increase of PD-L1 and PD-L2 expression. Blockade of surface PD-L1, but not PD-L2, on interferon-treated tubular epithelial cells resulted in a significant increase in CD4+ T-cell proliferation and cytokine production by CD4+ and CD8+ T cells. The expression of PD-L1, PD-L2, and PD-1 mRNA and protein was upregulated in biopsies of patients with renal allograft rejection compared to the respective levels found in the pre-transplant biopsies. Induction of PD-L1 was significantly associated with acute vascular rejection. Our study suggests that the renal epithelial PD-1/PD-L1 pathway exerts an inhibitory effect of on alloreactive T-cell responses. The upregulation of PD-L1 on proximal tubular epithelial cells in patients with acute allograft rejection may reduce T-cell-mediated injury.


Subject(s)
Antigens, CD/physiology , Kidney Tubules, Proximal/metabolism , T-Lymphocytes/immunology , B7-H1 Antigen , Cell Proliferation , Epithelial Cells/immunology , Epithelial Cells/metabolism , Graft Rejection/genetics , Graft Rejection/immunology , Humans , Interferon-beta/genetics , Interferon-beta/immunology , Interferon-beta/metabolism , Ligands , Lymphocyte Activation/genetics , Lymphocyte Activation/immunology , Proteins/genetics , Proteins/immunology , Proteins/metabolism , T-Lymphocytes/metabolism , Up-Regulation
7.
Kidney Int ; 77(9): 801-8, 2010 May.
Article in English | MEDLINE | ID: mdl-20164826

ABSTRACT

CXCR7 is an atypical receptor for the chemokines CXCL11 and CXCL12, which were found to be involved in animal models of allograft injury. We studied the expression of CXCR7 and its ligands in human kidneys by first quantifying the mRNA in 53 renal allograft biopsies. Receptor and ligand mRNAs were expressed in renal allografts, with a significant induction of CXCL11 and CXCL12 in biopsies showing borderline lesions and acute rejection. Immunohistochemical analysis for CXCR7 was performed in a series of 64 indication and 24 protocol biopsies. The indication biopsies included 46 acute rejections, 6 with interstitial fibrosis and tubular atrophy, and 12 pretransplant biopsies as controls. In control biopsies, CXCR7 protein was found on smooth muscle and on endothelial cells of a small number of peritubular vessels. The number of CXCR7-positive vessels was increased in acute rejection and, using double immunofluorescence labeling, a subset of these CXCR7-positive endothelial cells were identified as lymphatic vessels. Both CXCR7-positive blood and lymphatic vessels increased during allograft rejection. We found that CXCR7 is present in both blood and lymphatic endothelial cells in human renal allografts. Whether its presence modulates the formation of chemokine gradients and the recruitment of inflammatory cells will require further experimental studies.


Subject(s)
Chemokines/metabolism , Kidney/metabolism , Receptors, Chemokine/metabolism , Biopsy , Carrier Proteins/genetics , Carrier Proteins/immunology , Carrier Proteins/metabolism , Chemokine CXCL11/genetics , Chemokine CXCL11/metabolism , Chemokine CXCL12/genetics , Chemokine CXCL12/metabolism , Chemokines/genetics , Chemokines/immunology , Chemokines, CXC/genetics , Chemokines, CXC/immunology , Chemokines, CXC/metabolism , Endothelial Cells/immunology , Endothelial Cells/metabolism , Endothelial Cells/pathology , Humans , Kidney/immunology , Kidney/pathology , Ligands , Nephrectomy , RNA, Messenger/immunology , RNA, Messenger/metabolism , Receptors, Chemokine/genetics , Receptors, Chemokine/immunology
8.
Am J Pathol ; 176(2): 594-607, 2010 Feb.
Article in English | MEDLINE | ID: mdl-20019191

ABSTRACT

In the kidney, hypoxia contributes to tubulointerstitial fibrosis, but little is known about its implications for glomerular damage and glomerulosclerosis. Chronic hypoxia was hypothesized to be involved in nephrosclerosis (NSC) or "hypertensive nephropathy." In the present study genome-wide expression data from microdissected glomeruli were studied to examine the role of hypoxia in glomerulosclerosis of human NSC. Functional annotation analysis revealed prominent regulation of hypoxia-associated biological processes in NSC, including angiogenesis, fibrosis, and inflammation. Glomerular expression levels of a majority of genes regulated by the hypoxia-inducible factors (HIFs) were significantly altered in NSC. Among these HIF targets, chemokine C-X-C motif receptor 4 (CXCR4) was prominently induced. Glomerular CXCR4 mRNA induction was confirmed by quantitative RT-PCR in an independent cohort with NSC but not in those with other glomerulopathies. By immunohistological analysis, CXCR4 showed enhanced positivity in podocytes in NSC biopsy specimens. This CXCR4 positivity was associated with nuclear localization of HIF1alpha only in podocytes of NSC, indicating transcriptional activity of HIF. As the CXCR4 ligand CXCL12/SDF-1 is constitutively expressed in podocytes, autocrine signaling may contribute to NSC. In addition, a blocking CXCR4 antibody caused significant inhibition of wound closure by podocytes in an in vitro scratch assay. These data support a role for CXCR4/CXCL12 in human NSC and indicate that hypoxia not only is involved in tubulointerstitial fibrosis but also contributes to glomerular damage in NSC.


Subject(s)
Hypoxia/complications , Kidney Diseases/etiology , Nephrosclerosis/complications , Adolescent , Adult , Aged , Animals , Case-Control Studies , Cells, Cultured , Female , Gene Expression Profiling , Humans , Hypoxia/genetics , Kidney Diseases/genetics , Kidney Diseases/pathology , Kidney Glomerulus/drug effects , Kidney Glomerulus/metabolism , Kidney Glomerulus/pathology , Male , Mice , Middle Aged , Nephrosclerosis/genetics , Oligonucleotide Array Sequence Analysis , Oxygen/pharmacology , Young Adult
9.
Diabetes ; 58(2): 469-77, 2009 Feb.
Article in English | MEDLINE | ID: mdl-19017763

ABSTRACT

OBJECTIVE: Glomerular mesangial expansion and podocyte loss are important early features of diabetic nephropathy, whereas tubulointerstitial injury and fibrosis are critical for progression of diabetic nephropathy to kidney failure. Therefore, we analyzed the expression of genes in glomeruli and tubulointerstitium in kidney biopsies from diabetic nephropathy patients to identify pathways that may be activated in humans but not in murine models of diabetic nephropathy that fail to progress to glomerulosclerosis, tubulointerstitial fibrosis, and kidney failure. RESEARCH DESIGN AND METHODS: Kidney biopsies were obtained from 74 patients (control subjects, early and progressive type 2 diabetic nephropathy). Glomerular and tubulointerstitial mRNAs were microarrayed, followed by bioinformatics analyses. Gene expression changes were confirmed by real-time RT-PCR and immunohistological staining. Samples from db/db C57BLKS and streptozotocin-induced DBA/2J mice, commonly studied murine models of diabetic nephropathy, were analyzed. RESULTS: In human glomeruli and tubulointerstitial samples, the Janus kinase (Jak)-signal transducer and activator of transcription (Stat) pathway was highly and significantly regulated. Jak-1, -2, and -3 as well as Stat-1 and -3 were expressed at higher levels in patients with diabetic nephropathy than in control subjects. The estimated glomerular filtration rate significantly correlated with tubulointerstitial Jak-1, -2, and -3 and Stat-1 expression (R(2) = 0.30-0.44). Immunohistochemistry found strong Jak-2 staining in glomerular and tubulointerstitial compartments in diabetic nephropathy compared with control subjects. In contrast, there was little or no increase in expression of Jak/Stat genes in the db/db C57BLKS or diabetic DBA/2J mice. CONCLUSIONS: These data suggest a direct relationship between tubulointerstitial Jak/Stat expression and progression of kidney failure in patients with type 2 diabetic nephropathy and distinguish progressive human diabetic nephropathy from nonprogressive murine diabetic nephropathy.


Subject(s)
Diabetic Nephropathies/genetics , Diabetic Nephropathies/metabolism , Gene Expression , Adult , Animals , Blotting, Western , Female , Humans , Immunohistochemistry , Janus Kinase 1/genetics , Janus Kinase 1/metabolism , Janus Kinase 2/genetics , Janus Kinase 2/metabolism , Janus Kinase 3/genetics , Janus Kinase 3/metabolism , Male , Mice , Mice, Inbred C57BL , Mice, Inbred DBA , Middle Aged , Oligonucleotide Array Sequence Analysis , Reactive Oxygen Species/metabolism , Reverse Transcriptase Polymerase Chain Reaction , STAT1 Transcription Factor/genetics , STAT1 Transcription Factor/metabolism , STAT3 Transcription Factor/genetics , STAT3 Transcription Factor/metabolism
10.
J Am Soc Nephrol ; 19(11): 2225-36, 2008 Nov.
Article in English | MEDLINE | ID: mdl-18776125

ABSTRACT

The endoplasmic reticulum (ER) is an important site for protein folding and becomes "stressed" when its capacity to fold proteins is overwhelmed. In response, "unfolded protein response" (UPR) genes are induced, increasing the capacity to fold proteins; if the response is insufficient, then apoptosis ensues. For investigation of whether proteinuria and hyperglycemia induce ER stress in renal epithelial cells, microarray data from biopsies of established diabetic nephropathy (DN) were analyzed. Expression of UPR genes was significantly different in these biopsies than in control kidneys or biopsies of patients with mild DN, suggesting an association between the degree of DN and UPR gene expression. Expression of the transcription factor XBP1 and the ER chaperones HSPA5 and HYOU1 were increased, but the proapoptotic gene DDIT3 was unchanged. These findings were replicated in an independent cohort of patients with established DN by real-time reverse transcriptase-PCR. Immunofluorescence of renal biopsies from patients with DN confirmed the upregulation for HSPA5 and HYOU1 proteins in tubular epithelia. In biopsies of minimal-change disease, the mRNA levels of some ER stress molecules were also induced, but protein expression of HSPA5 and HYOU1 remained significantly lower than that observed in DN. Exposure of renal tubular epithelial cells to albumin and high glucose in vitro enhanced expression of genes involved in ER stress. These observations suggest that in proteinuric diseases, tubular epithelial cells undergo ER stress, which induces an adaptive, protective UPR. Although this may protect the cells from ER stress, persistence of hyperglycemia and proteinuria may eventually lead to apoptosis.


Subject(s)
Endoplasmic Reticulum/metabolism , Hyperglycemia/metabolism , Proteinuria/metabolism , Albumins/pharmacology , Cell Line , DNA-Binding Proteins/genetics , Diabetic Nephropathies/genetics , Diabetic Nephropathies/metabolism , Endoplasmic Reticulum/drug effects , Endoplasmic Reticulum Chaperone BiP , Epithelial Cells/drug effects , Epithelial Cells/metabolism , Glucose/pharmacology , HSP70 Heat-Shock Proteins , Heat-Shock Proteins/genetics , Humans , Hyperglycemia/genetics , Kidney Tubules/cytology , Kidney Tubules/drug effects , Kidney Tubules/metabolism , Molecular Chaperones/genetics , Oligonucleotide Array Sequence Analysis , Protein Folding , Proteins/genetics , Proteinuria/genetics , RNA, Messenger/genetics , RNA, Messenger/metabolism , Regulatory Factor X Transcription Factors , Thapsigargin/pharmacology , Transcription Factors/genetics , Tunicamycin/pharmacology , X-Box Binding Protein 1
11.
Nephrol Ther ; 4(5): 306-11, 2008 Oct.
Article in English | MEDLINE | ID: mdl-18586598

ABSTRACT

With the advent of transcriptome profiling techniques, an enormous amount of data has been generated in the field of molecular nephrology. We will review analysis tools and challenges for genomic approaches and present their application in gene-expression studies on kidney biopsies. The findings in this rapidly evolving field may ultimately complement histopathological analysis, the current diagnostic and prognostic gold standard. Altogether, genomics may bring nephrology one-step closer to a systematic understanding of biological processes involved in renal disease.


Subject(s)
Genomics , Kidney Diseases/genetics , Biopsy , Computational Biology , Gene Expression , Gene Expression Profiling , Humans , Kidney/anatomy & histology , Kidney/physiology , Kidney Diseases/pathology , Kidney Transplantation/adverse effects , Nephrology , RNA, Messenger/genetics , Reverse Transcriptase Polymerase Chain Reaction , Treatment Failure
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