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1.
Nat Commun ; 8(1): 2017, 2017 12 05.
Article in English | MEDLINE | ID: mdl-29208904

ABSTRACT

In the original version of this Article, the Acknowledgements section omitted the Department of Energy-funded Environmental and Molecular Sciences Laboratory in which the XRD measurements were performed. This error has now been corrected in both the PDF and HTML versions of the Article.

2.
Nat Commun ; 8(1): 396, 2017 08 30.
Article in English | MEDLINE | ID: mdl-28855506

ABSTRACT

Long residence times of soil organic matter have been attributed to reactive mineral surface sites that sorb organic species and cause inaccessibility due to physical isolation and chemical stabilization at the organic-mineral interface. Instrumentation for probing this interface is limited. As a result, much of the micron- and molecular-scale knowledge about organic-mineral interactions remains largely qualitative. Here we report the use of force spectroscopy to directly measure the binding between organic ligands with known chemical functionalities and soil minerals in aqueous environments. By systematically studying the role of organic functional group chemistry with model minerals, we demonstrate that chemistry of both the organic ligand and mineral contribute to values of binding free energy and that changes in pH and ionic strength produce significant differences in binding energies. These direct measurements of molecular binding provide mechanistic insights into organo-mineral interactions, which could potentially inform land-carbon models that explicitly include mineral-bound C pools.Most molecular scale knowledge on soil organo-mineral interactions remains qualitative due to instrument limitations. Here, the authors use force spectroscopy to directly measure free binding energy between organic ligands and minerals and find that both chemistry and environmental conditions affect binding.

3.
Biomaterials ; 34(13): 3303-14, 2013 Apr.
Article in English | MEDLINE | ID: mdl-23398885

ABSTRACT

Enamel formation involves highly orchestrated intracellular and extracellular events; following development, the tissue is unable to regenerate, making it a challenging target for tissue engineering. We previously demonstrated the ability to trigger enamel differentiation and regeneration in the embryonic mouse incisor using a self-assembling matrix that displayed the integrin-binding epitope RGDS (Arg-Gly-Asp-Ser). To further elucidate the intracellular signaling pathways responsible for this phenomenon, we explore here the coupling response of integrin receptors to the biomaterial and subsequent downstream gene expression profiles. We demonstrate that the artificial matrix activates focal adhesion kinase (FAK) to increase phosphorylation of both c-Jun N-terminal kinase (JNK) and its downstream transcription factor c-Jun (c-Jun). Inhibition of FAK blocked activation of the identified matrix-mediated pathways, while independent inhibition of JNK nearly abolished phosphorylated-c-Jun (p-c-Jun) and attenuated the pathways identified to promote enamel regeneration. Cognate binding sites in the amelogenin promoter were identified to be transcriptionally up-regulated in response to p-c-Jun. Furthermore, the artificial matrix induced gene expression as evidenced by an increased abundance of amelogenin, the main protein expressed during enamel formation, and the CCAAT enhancer binding protein alpha (C/EBPα), which is the known activator of amelogenin expression. Elucidating these cues not only provides guidelines for the design of synthetic regenerative strategies and opportunities to manipulate pathways to regulate enamel regeneration, but can provide insight into the molecular mechanisms involved in tissue formation.


Subject(s)
Biocompatible Materials/pharmacology , CCAAT-Enhancer-Binding Protein-alpha/metabolism , Dental Enamel/physiology , Integrins/metabolism , Nanofibers/chemistry , Proto-Oncogene Proteins c-jun/metabolism , Regeneration/drug effects , Amelogenin/genetics , Amelogenin/metabolism , Animals , Base Sequence , Cell Line , Cells, Cultured , Dental Enamel/drug effects , Dental Enamel/enzymology , Enzyme Activation/drug effects , Epithelial Cells/drug effects , Epithelial Cells/enzymology , Female , Focal Adhesion Protein-Tyrosine Kinases/metabolism , JNK Mitogen-Activated Protein Kinases/metabolism , Mice , Molecular Sequence Data , Oligopeptides/pharmacology , Peptides/pharmacology , Phosphorylation/drug effects , Signal Transduction/drug effects , Surface-Active Agents/pharmacology , Up-Regulation/drug effects
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