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1.
bioRxiv ; 2024 Feb 12.
Article in English | MEDLINE | ID: mdl-38405962

ABSTRACT

When an organism encounters a pathogen, the host innate immune system activates to defend against pathogen colonization and toxic xenobiotics produced. C. elegans employ multiple defense systems to ensure survival when exposed to Pseudomonas aeruginosa including activation of the cytoprotective transcription factor SKN-1/NRF2. Although wildtype C. elegans quickly learn to avoid pathogens, here we describe a peculiar apathy-like behavior towards PA14 in animals with constitutive activation of SKN-1, whereby animals choose not to leave and continue to feed on the pathogen even when a non-pathogenic and healthspan-promoting food option is available. Although lacking the urgency to escape the infectious environment, animals with constitutive SKN-1 activity are not oblivious to the presence of the pathogen and display the typical pathogen-induced intestinal distension and eventual demise. SKN-1 activation, specifically in neurons and intestinal tissues, orchestrates a unique transcriptional program which leads to defects in serotonin signaling that is required from both neurons and non-neuronal tissues. Serotonin depletion from SKN-1 activation limits pathogen defense capacity, drives the pathogen-associated apathy behaviors and induces a synthetic sensitivity to selective serotonin reuptake inhibitors. Taken together, our work reveals new insights into how animals perceive environmental pathogens and subsequently alter behavior and cellular programs to promote survival. KEY POINTS: Identify an apathy-like behavioral response for pathogens resulting from the constitutive activation of the cytoprotective transcription factor SKN-1.Uncover the obligate role for serotonin synthesis in both neuronal and non-neuronal cells for the apathy-like state and ability of serotonin treatment to restore normal behaviors.Characterize the timing and tissue specificity of SKN-1 nuclear localization in neurons and intestinal cells in response to pathogen exposure.Define the unique and context-specific transcriptional signatures of animals with constitutive SKN-1 activation when exposed to pathogenic environments.Reveal necessity for both neuronal and non-neuronal serotonin signaling in host survival from pathogen infection.

2.
Bio Protoc ; 12(5): e4340, 2022 Mar 05.
Article in English | MEDLINE | ID: mdl-35592599

ABSTRACT

The ability to stain lipid stores in vivo allows for the facile assessment of metabolic status in individuals of a population following genetic and environmental manipulation or pharmacological treatment. In the animal model Caenorhabditis elegans, lipids are stored in and mobilized from intracellular lipid droplets in the intestinal and hypodermal tissues. The abundance, size, and distribution of these lipids can be readily assessed by two staining methods for neutral lipids: Oil Red O (ORO) and Nile Red (NR). ORO and NR can be used to quantitatively measure lipid droplet abundance, while ORO can also define tissue distribution and lipid droplet size. C. elegans are a useful animal model in studying pathways relating to aging, fat storage, and metabolism, as their transparent nature allows for easy microscopic assessment of lipid droplets. This is done by fixation and permeabilization, staining with NR or ORO, image capture on a microscope, and computational identification and quantification of lipid droplets in individuals within a cohort. To ensure reproducibility in lipid measurements, we provide a detailed protocol to measure intracellular lipid dynamics in C. elegans. Graphic abstract: Flow chart depicting the preparation of C. elegans for fat staining protocols.

3.
Geroscience ; 44(1): 463-483, 2022 02.
Article in English | MEDLINE | ID: mdl-34820764

ABSTRACT

Accumulation of senescent cells may drive age-associated alterations and pathologies. Senolytics are promising therapeutics that can preferentially eliminate senescent cells. Here, we performed a high-throughput automatized screening (HTS) of the commercial LOPAC®Pfizer library on aphidicolin-induced senescent human fibroblasts, to identify novel senolytics. We discovered the nociceptin receptor FQ opioid receptor (NOP) selective ligand 1-[1-(1-methylcyclooctyl)-4-piperidinyl]-2-[(3R)-3-piperidinyl]-1H-benzimidazole (MCOPPB, a compound previously studied as potential anxiolytic) as the best scoring hit. The ability of MCOPPB to eliminate senescent cells in in vitro models was further tested in mice and in C. elegans. MCOPPB reduced the senescence cell burden in peripheral tissues but not in the central nervous system. Mice and worms exposed to MCOPPB also exhibited locomotion and lipid storage changes. Mechanistically, MCOPPB treatment activated transcriptional networks involved in the immune responses to external stressors, implicating Toll-like receptors (TLRs). Our study uncovers MCOPPB as a NOP ligand that, apart from anxiolytic effects, also shows tissue-specific senolytic effects.


Subject(s)
Anti-Anxiety Agents , Cellular Senescence , Narcotic Antagonists/pharmacology , Senotherapeutics , Analgesics, Opioid , Animals , Anti-Anxiety Agents/pharmacology , Caenorhabditis elegans , High-Throughput Screening Assays , Humans , Ligands , Mice , Opioid Peptides , Piperidines/pharmacology , Receptors, Opioid , Nociceptin
4.
Methods Mol Biol ; 2144: 103-110, 2020.
Article in English | MEDLINE | ID: mdl-32410028

ABSTRACT

Lipids are an essential macromolecule used for diverse functions including use for structural components of membranes, energy storage, and signaling molecules. The regulation of cellular lipid stores is critical for maintaining organismal metabolic homeostasis. Lipid homeostasis can decline with age, which can lead to poor health outcomes and accelerate the progression of disease states. C. elegans represents an excellent model to study age-related decline in lipid homeostasis due to its short lifespan and remarkably well-conserved metabolic pathways. Due to their ease of use and similarities, there have been numerous developments in methodologies to study intracellular lipid abundance and tissue distribution in C. elegans.


Subject(s)
Lipid Metabolism/genetics , Longevity/genetics , Metabolic Networks and Pathways/genetics , Molecular Biology/methods , Animals , Caenorhabditis elegans/genetics , Caenorhabditis elegans/growth & development , Caenorhabditis elegans Proteins/genetics , Caenorhabditis elegans Proteins/metabolism , Homeostasis/genetics , Lipids/genetics , Longevity/physiology , Signal Transduction/genetics , Staining and Labeling
5.
Proc Natl Acad Sci U S A ; 116(44): 22322-22330, 2019 10 29.
Article in English | MEDLINE | ID: mdl-31611372

ABSTRACT

Early host responses toward pathogens are essential for defense against infection. In Caenorhabditis elegans, the transcription factor, SKN-1, regulates cellular defenses during xenobiotic intoxication and bacterial infection. However, constitutive activation of SKN-1 results in pleiotropic outcomes, including a redistribution of somatic lipids to the germline, which impairs health and shortens lifespan. Here, we show that exposing C. elegans to Pseudomonas aeruginosa similarly drives the rapid depletion of somatic, but not germline, lipid stores. Modulating the epigenetic landscape refines SKN-1 activity away from innate immunity targets, which alleviates negative metabolic outcomes. Similarly, exposure to oxidative stress redirects SKN-1 activity away from pathogen response genes while restoring somatic lipid distribution. In addition, activating p38/MAPK signaling in the absence of pathogens, is sufficient to drive SKN-1-dependent loss of somatic fat. These data define a SKN-1- and p38-dependent axis for coordinating pathogen responses, lipid homeostasis, and survival and identify transcriptional redirection, rather than inactivation, as a mechanism for counteracting the pleiotropic consequences of aberrant transcriptional activity.


Subject(s)
Caenorhabditis elegans Proteins/metabolism , DNA-Binding Proteins/metabolism , Epigenesis, Genetic , Lipid Metabolism , Pseudomonas Infections/genetics , Transcription Factors/metabolism , Animals , Caenorhabditis elegans , Caenorhabditis elegans Proteins/genetics , DNA-Binding Proteins/genetics , Immunity, Innate , MAP Kinase Signaling System , Oxidative Stress , Pseudomonas Infections/metabolism , Pseudomonas Infections/microbiology , Pseudomonas aeruginosa/pathogenicity , Transcription Factors/genetics , Transcriptome , p38 Mitogen-Activated Protein Kinases/metabolism
6.
Dev Cell ; 46(3): 302-315.e5, 2018 08 06.
Article in English | MEDLINE | ID: mdl-30086301

ABSTRACT

In Caenorhabditis elegans, the primordial germ cells Z2 and Z3 are born during early embryogenesis and then held in a transcriptionally quiescent state where the genome is highly compacted. When hatched L1s feed, the germline genome decompacts, and RNAPII is abruptly and globally activated. A previously documented yet unexplained feature of germline genome activation in the worm is the appearance of numerous DNA breaks coincident with RNAPII transcription. Here, we show that the DNA breaks are induced by topoisomerase II and that they function to recruit the RUVB complex to chromosomes so that RUVB can decompact the chromatin. DNA break- and RUVB-mediated decompaction is required for zygotic genome activation. This work highlights the importance of global chromatin decompaction in the rapid induction of gene expression and shows that one way cells achieve global decompaction is through programmed DNA breaks.


Subject(s)
DNA Breaks, Double-Stranded , DNA Damage/genetics , Embryonic Development/genetics , Germ Cells/metabolism , Animals , Caenorhabditis elegans , Caenorhabditis elegans Proteins/metabolism , Chromatin/metabolism , Chromosomes/metabolism , DNA Repair/physiology , Mutation/genetics , Zygote/metabolism
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