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J Microbiol Methods ; 115: 64-6, 2015 Aug.
Article in English | MEDLINE | ID: mdl-26027542

ABSTRACT

Lipid/DNA co-extraction from one sample is attractive in limiting biases associated with microbial community analysis from separate extractions. We sought to enhance established co-extraction methods and use high-throughput 16S rRNA sequencing to identify preferentially extracted taxa from co-extracted DNA. Co-extraction results in low DNA yields and distinct community structure changes.


Subject(s)
Analytic Sample Preparation Methods/methods , Bacteria/isolation & purification , DNA, Bacterial/isolation & purification , Fatty Acids/isolation & purification , Soil Microbiology , Bacteria/classification , Bacteria/genetics , Bacteria/metabolism , Biodiversity , DNA, Bacterial/genetics , Fatty Acids/metabolism , Phospholipid Ethers/isolation & purification , Phospholipid Ethers/metabolism
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