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1.
BMC Bioinformatics ; 16: 166, 2015 May 20.
Article in English | MEDLINE | ID: mdl-25986937

ABSTRACT

BACKGROUND: Traditional cancer treatments have centered on cytotoxic drugs and general purpose chemotherapy that may not be tailored to treat specific cancers. Identification of molecular markers that are related to different types of cancers might lead to discovery of drugs that are patient and disease specific. This study aims to use microarray gene expression cancer data to identify biomarkers that are indicative of different types of cancers. Our aim is to provide a multi-class cancer classifier that can simultaneously differentiate between cancers and identify type-specific biomarkers, through the application of the Binary Coded Genetic Algorithm (BCGA) and a neural network based Extreme Learning Machine (ELM) algorithm. RESULTS: BCGA and ELM are combined and used to select a subset of genes that are present in the Global Cancer Mapping (GCM) data set. This set of candidate genes contains over 52 biomarkers that are related to multiple cancers, according to the literature. They include APOA1, VEGFC, YWHAZ, B2M, EIF2S1, CCR9 and many other genes that have been associated with the hallmarks of cancer. BCGA-ELM is tested on several cancer data sets and the results are compared to other classification methods. BCGA-ELM compares or exceeds other algorithms in terms of accuracy. We were also able to show that over 50% of genes selected by BCGA-ELM on GCM data are cancer related biomarkers. CONCLUSIONS: We were able to simultaneously differentiate between 14 different types of cancers, using only 92 genes, to achieve a multi-class classification accuracy of 95.4% which is between 21.6% and 38% higher than other results in the literature for multi-class cancer classification. Our findings suggest that computational algorithms such as BCGA-ELM can facilitate biomarker-driven integrated cancer research that can lead to a detailed understanding of the complexities of cancer.


Subject(s)
Algorithms , Artificial Intelligence , Biomarkers, Tumor/genetics , Neoplasms/classification , Neoplasms/diagnosis , Neural Networks, Computer , Gene Expression Regulation, Neoplastic , Humans , Neoplasms/genetics , Oligonucleotide Array Sequence Analysis , Pattern Recognition, Automated
2.
Psychol. neurosci. (Impr.) ; 7(1): 15-26, Jan.-June 2014. tab
Article in English | LILACS | ID: lil-710020

ABSTRACT

Persistent pain is prevalent in the elderly population, although it is not an inevitable part of aging. It is important to understand how to manage pain effectively in old age, particularly because an increasing number of individuals are becoming older, or living longer. Several problems, less common in younger adults, may complicate the treatment of pain. An accurate pain assessment is required for the most efficient strategy of pain treatment. Challenges to an effective pain assessment include: pain underreporting by patients, atypical manifestations of pain in elderly, age-associated pharmacodynamic and pharmacokinetic changes to specific drugs, other general age-related changes, and misconceptions about tolerance or addiction to opioids. However, physicians are able to provide geriatric patients with appropriate analgesia by using comprehensive assessment involving a multidisciplinary approach, and the appropriate use of various treatment modalities.


Subject(s)
Geriatric Assessment , Health of the Elderly , Pain Measurement/trends , Drug Therapy , Geriatrics , Pain Threshold , Pharmacokinetics , Psychological Techniques
3.
Psychol. neurosci. (Impr.) ; 7(1): 15-26, Jan.-June 2014. tab
Article in English | Index Psychology - journals | ID: psi-63126

ABSTRACT

Persistent pain is prevalent in the elderly population, although it is not an inevitable part of aging. It is important to understand how to manage pain effectively in old age, particularly because an increasing number of individuals are becoming older, or living longer. Several problems, less common in younger adults, may complicate the treatment of pain. An accurate pain assessment is required for the most efficient strategy of pain treatment. Challenges to an effective pain assessment include: pain underreporting by patients, atypical manifestations of pain in elderly, age-associated pharmacodynamic and pharmacokinetic changes to specific drugs, other general age-related changes, and misconceptions about tolerance or addiction to opioids. However, physicians are able to provide geriatric patients with appropriate analgesia by using comprehensive assessment involving a multidisciplinary approach, and the appropriate use of various treatment modalities.(AU)


Subject(s)
Pain Measurement/trends , Health of the Elderly , Geriatric Assessment , Geriatrics , Pharmacokinetics , Pain Threshold , Drug Therapy , Psychological Techniques
4.
Article in English | MEDLINE | ID: mdl-23920733

ABSTRACT

UNLABELLED: Healthcare can be enhanced by the effective use of information technology to improve the quality and safety of care and many healthcare providers are adopting advanced health information technology to improve their healthcare delivery process. Qatar is a relatively young Middle Eastern country with an ambitious and progressive national strategy to develop its healthcare system, including an advanced e-health infrastructure delivering the right medical information at the right time to clinicians and patients. To assess the effectiveness of such programs, it is important to have a pre-intervention baseline from which comparisons, performance against target measures and forward thinking strategic planning can be grounded. This study presents the first published campus wide survey of Hospital Information Systems in large public and private hospitals in Qatar. OBJECTIVE: To qualitatively assess and describe the current state of Hospital Information Systems in large hospitals in Qatar, and to establish a baseline or reference point for Qatar's readiness for, and adoption of Hospital Information Systems.


Subject(s)
Clinical Laboratory Information Systems/statistics & numerical data , Electronic Health Records/statistics & numerical data , Health Care Surveys , Hospital Bed Capacity/statistics & numerical data , Hospital Information Systems/statistics & numerical data , Medication Systems, Hospital/statistics & numerical data , Radiology Information Systems/statistics & numerical data , Qatar
5.
Middle East J Anaesthesiol ; 21(2): 243-50, 2011 Jun.
Article in English | MEDLINE | ID: mdl-22435276

ABSTRACT

Mucopolysaccharidosis (MPS) is a group of genetic disorders that presents challenges during anesthetic care and in particular difficulty with airway management. Patients should be managed by experienced anesthesiologists at centers that are familiar with these types of conditions. Rarely encountered disease states have been identified as important topics in the continuing education of clinical anesthesiologists. This review will define MPS, describe the pathophysiology of MPS, describe how patients with this rare lysosomal storage disorders have dysfunction of tissues, cite the incidence of MPS, list the clinical manifestations and specific problems associated with the administration of anesthesia to patients with MPS, present treatment options for patients with MPS, define appropriate preoperative evaluation and perioperative management of these patients, including, to anticipate potential postoperative airway problems.


Subject(s)
Anesthesia/methods , Mucopolysaccharidoses/complications , Humans , Mucopolysaccharidoses/classification , Mucopolysaccharidoses/diagnosis , Mucopolysaccharidoses/therapy
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