ABSTRACT
Glycolysis in the yeast Saccharomyces cerevisiae exhibits temporal oscillation under anaerobic or semianaerobic conditions. Previous evidence indicated that at least two membrane-bound ATPases, the mitochondrial F(0)F(1) ATPase and the plasma membrane P-type ATPase (Pma1p), were important in regulating the glycolytic oscillation. Measurements of intracellular ATP provide a unique tool to understand the role of these membrane ATPases and how their activities are regulated. We have constructed a new nanobiosensor that can perform time-resolved measurements of intracellular ATP in intact cells. Measurements of the temporal behaviour of intracellular ATP in a yeast strain with oscillating glycolysis showed that, in addition to oscillation in intracellular ATP, there is an overall slow decrease in intracellular ATP because the ATP consumption rate exceeds the ATP production in glycolysis. Measurements of the temporal behaviour of intracellular ATP in yeast strains lacking either of the two membrane bound ATPases have confirmed that F(0)F(1) ATPase and Pma1p contribute significantly to the ATP consumption in the cell and to the regulation of glycolytic oscillation. Furthermore, our measurements also demonstrate that ATPase activity is under strict control. In the absence of glucose ATPase activity is switched off, and the intracellular ATP concentration is high. When glucose is added to the cells the ATP concentration starts to decrease, because ATP consumption exceeds ATP production by glycolysis. Finally, when glucose is used up, the ATP consumption stops immediately. Thus, glucose or some compound derived from glucose must be involved in controlling the activity of these two ATPases.
Subject(s)
Adenosine Triphosphate/metabolism , Biological Clocks/physiology , Glycolysis/physiology , Proton-Translocating ATPases/metabolism , Saccharomyces cerevisiae/metabolism , Adenosine Triphosphate/analysis , Aptamers, Nucleotide/genetics , Biosensing Techniques/methods , Microscopy, Fluorescence , Nanoparticles , Saccharomyces cerevisiae/enzymologyABSTRACT
Cellulose nanocrystals were converted into ratiometric pH-sensing nanoparticles by dual fluorescent labelling employing a facile one-pot procedure. A simple and versatile three-step procedure was also demonstrated extending the number of fluorophores available for grafting. In this method an amine group was introduced via esterification followed by a thiol-ene click reaction.
Subject(s)
Fluorescent Dyes/chemistry , Nanoparticles/chemistry , Amines/chemistry , Biosensing Techniques , Cellulose/chemistry , Esterification , Hydrogen-Ion Concentration , Isothiocyanates/chemistry , Spectrometry, Fluorescence , Sulfhydryl Compounds/chemistryABSTRACT
A series of six double-functionalised nucleosides, in which aromatic moieties were inserted into the 5'-(S)-C-position, were synthesised and incorporated into DNA duplexes. The aromatic moieties were thymine-1-yl, phenyl, 1,2,3-triazol-1-yl, 1,2,3-triazol-4-yl, 4-(uracil-5-yl)-1,2,3-triazol-1-yl and 4-phenyl-1,2,3-triazol-1-yl. The DNA duplexes were studied with UV melting curves, CD spectroscopy and molecular modelling. The results showed that the aromatic moieties in some cases interact in the minor groove forming DNA zipper structures. The strongest specific interaction was found between two thymines or between a thymine and a phenyl group in a crossed (-3)-zipper motif (i.e., with two base pairs interspacing the modifications). Modelling revealed that the interaction is aromatic stacking across the minor groove. Also, the extended uracil-triazole moiety demonstrated zipper contacts in the minor groove as well as binding to the floor of the groove.
