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1.
Sci Rep ; 10(1): 15869, 2020 09 28.
Article in English | MEDLINE | ID: mdl-32985540

ABSTRACT

Glomerular filtration rate (GFR) and urinary albumin excretion rate (UAER) are used to diagnose and classify the severity of chronic kidney disease. Total adiponectin (T-AN) and high molecular weight adiponectin (H-AN) assays were developed using the fully automated immunoassay system, HI-1000 and their significance over conventional biomarkers were investigated. The T-AN and H-AN assays had high reproducibility, good linearity, and sufficient sensitivity to detect trace amounts of adiponectin in the urine. Urine samples after gel filtration were analyzed for the presence of different molecular isoforms. Low molecular weight (LMW) forms and monomers were the major components (93%) of adiponectin in the urine from a diabetic patient with normoalbuminuria. Urine from a microalbuminuria patient contained both high molecular weight (HMW) (11%) and middle molecular weight (MMW) (28%) adiponectin, although the LMW level was still high (52%). The amount of HMW (32%) and MMW (42%) were more abundant than that of LMW (24%) in a diabetic patient with macroalbuminuria. T-AN (r = - 0.43) and H-AN (r = - 0.38) levels showed higher correlation with estimated GFR (eGFR) than UAER (r = - 0.23). Urinary levels of both T-AN and H-AN negatively correlated with renal function in diabetic patients and they may serve as new biomarkers for diabetic kidney disease.


Subject(s)
Adiponectin/urine , Diabetic Nephropathies/urine , Limit of Detection , Urinalysis/methods , Adiponectin/chemistry , Adult , Aged , Automation , Biomarkers/chemistry , Biomarkers/urine , Female , Humans , Male , Middle Aged , Molecular Weight , Protein Multimerization , Protein Structure, Quaternary
2.
Virology ; 487: 188-97, 2016 Jan.
Article in English | MEDLINE | ID: mdl-26539800

ABSTRACT

Cucumber mosaic virus (CMV) is a damaging pathogen of over 200 mono- and dicotyledonous crop species worldwide. It has the broadest known host range of any virus, but the timescale of its evolution is unknown. To investigate the evolutionary history of this virus, we obtained the genomic sequences of 40 CMV isolates from brassicas sampled in Iran, Turkey and Japan, and combined them with published sequences. Our synonymous ('silent') site analyses revealed that the present CMV population is the progeny of a single ancestor existing 1550-2600 years ago, but that the population mostly radiated 295-545 years ago. We found that the major CMV lineages are not phylogeographically confined, but that recombination and reassortment is restricted to local populations and that no reassortant lineage is more than 251 years old. Our results highlight the different evolutionary patterns seen among viral pathogens of brassica crops across the world.


Subject(s)
Brassica/virology , Cucumovirus/genetics , Evolution, Molecular , Genome, Viral/genetics , Base Sequence , Biological Evolution , Cucumovirus/growth & development , Cucumovirus/isolation & purification , Genetics, Population , Iran , Japan , Phylogeny , Plant Diseases/virology , Plant Leaves/virology , RNA, Viral/genetics , Reassortant Viruses/genetics , Recombination, Genetic , Sequence Alignment , Sequence Analysis, RNA , Turkey
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