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1.
ACS Cent Sci ; 10(3): 555-568, 2024 Mar 27.
Article in English | MEDLINE | ID: mdl-38559311

ABSTRACT

Myxobacteria are a prolific source of secondary metabolites with sheer chemical complexity, intriguing biosynthetic enzymology, and diverse biological activities. In this study, we report the discovery, biosynthesis, biomimetic total synthesis, physiological function, structure-activity relationship, and self-resistance mechanism of the 5-methylated pyrazinone coralinone from a myxobacterium Corallococcus exiguus SDU70. A single NRPS/PKS gene corA was genetically and biochemically demonstrated to orchestrate coralinone, wherein the integral PKS part is responsible for installing the 5-methyl group. Intriguingly, coralinone exacerbated cellular aggregation of myxobacteria grown in liquid cultures by enhancing the secretion of extracellular matrix, and the 5-methylation is indispensable for the alleged activity. We provided an evolutionary landscape of the corA-associated biosynthetic gene clusters (BGCs) distributed in the myxobacterial realm, revealing the divergent evolution for the diversity-oriented biosynthesis of 5-alkyated pyrazinones. This phylogenetic contextualization provoked us to identify corB located in the proximity of corA as a self-resistance gene. CorB was experimentally verified to be a protease that hydrolyzes extracellular proteins to antagonize the agglutination-inducing effect of coralinone. Overall, we anticipate these findings will provide new insights into the chemical ecology of myxobacteria and lay foundations for the maximal excavation of these largely underexplored resources.

2.
J Nat Prod ; 86(2): 340-345, 2023 02 24.
Article in English | MEDLINE | ID: mdl-36693198

ABSTRACT

Chemical redundancy of microbial natural products (NPs) underscores the importance to exploit new resources of microorganisms. Insect-associated microbes are prolific but largely underexplored sources of diverse NPs. Herein, we discovered the new compound α-l-rhamnosyl-actiphenol (1) from a millipede-associated Streptomyces sp. ML6, which is the first glycosylated cycloheximide-class natural product. Interestingly, bioinformatics analysis of the ML6 genome revealed that the biosynthesis of 1 involves a cooperation between two gene clusters (chx and rml) located distantly on the genome of ML6. We also carried out in vitro enzymatic glycosylation of cycloheximide using an exotic promiscuous glycosyltransferase BsGT-1, which resulted in the production of an additional cycloheximide glycoside cycloheximide 7-O-ß-d-glucoside (5). Although the antifungal and cytotoxic activities of the new compounds 1 and 5 were attenuated relative to those of cycloheximide, our work not only enriches the chemical repertoire of the cycloheximide family but also provides new insights into the structure-activity relationship optimization and ecological roles of cycloheximide.


Subject(s)
Actinobacteria , Glycosylation , Cycloheximide , Actinobacteria/metabolism , Glycosyltransferases/genetics , Glycosyltransferases/metabolism , Glycosides
3.
ACS Synth Biol ; 10(11): 2904-2909, 2021 11 19.
Article in English | MEDLINE | ID: mdl-34757714

ABSTRACT

Genome mining has revealed that myxobacteria contain a myriad of cryptic biosynthetic gene clusters (BGCs). Here, we report the characterization of a panel of myxobacterial promoters with variable strength that are applicable in the engineering of BGCs in myxobacteria. The screened strongest constitutive promoter was used to efficiently enhance the expression of two complex BGCs governing the biosynthesis of myxochromide and DKxanthene in the model myxobacterium Myxococcus xanthus DK1622. We also showcased the combination of promoter engineering and MS2-based spectral networking as an effective strategy to shed light on the previously overlooked chemistry in the family of myxochromide-type lipopeptides. The enriched promoter library substantially expanded the synthetic biology toolkit available for myxobacteria.


Subject(s)
Myxococcales/genetics , Myxococcales/metabolism , Myxococcus xanthus/genetics , Myxococcus xanthus/metabolism , Promoter Regions, Genetic/genetics , Secondary Metabolism/genetics , Bacterial Proteins/genetics , Gene Expression Regulation, Bacterial/genetics , Lipopeptides/genetics , Multigene Family/genetics
4.
J Nat Prod ; 84(10): 2744-2748, 2021 10 22.
Article in English | MEDLINE | ID: mdl-34623817

ABSTRACT

Myxobacteria are a prolific source of structurally diverse natural products, and one of the best-studied myxobacterial products is the siderophore myxochelin. Herein, we report two new compounds, myxochelins N (1) and O (2), that are nicotinic paralogs of myxochelin A, from the terrestrial myxobacterium Archangium sp. SDU34; 2 is functionalized with a rare 2-oxazolidinone. A precursor-feeding experiment implied that the biosynthesis of 1 or 2 was due to altered substrate specificity of the loading module of MxcE, which likely accepts nicotinic acid and benzoic acid instead of more conventional 2,3-dihydroxybenzoic acid. We also employed a phylogenomic approach to map the evolutionary relationships of the myxochelin biosynthetic gene clusters (BGCs) in all the available myxobacterial genomes, to pave the way for the future discovery of potentially hidden myxochelin derivatives. Although the biological function of 1 and 2 is unclear yet, this work underpins that even extensively studied BGCs in myxobacteria can still produce new chemistry.


Subject(s)
Biological Products/chemistry , Lysine/analogs & derivatives , Myxococcales/chemistry , Lysine/biosynthesis , Molecular Structure , Multigene Family , Myxococcales/genetics
5.
Appl Opt ; 57(6): 1387-1392, 2018 Feb 20.
Article in English | MEDLINE | ID: mdl-29469837

ABSTRACT

This paper proposed a novel real-time compression load measurement system for a kayaking paddle based on optical fiber technology. The optical fiber sensor, fiber Bragg grating, is embedded in a 2 mm polydimethylsiloxane membrane, which serves as a pressure mat that can be easily attached/detached to/from the kayaking paddle. The proposed system is proposed for measuring and evaluating both handgrip loading and paddle blade load distribution during on-water kayaking, e.g., peak compression load distribution pattern and duration of the paddle blade in real time. Both indoor prototype experiment results and on-water experimental data on an expert paddler were presented to demonstrate the application potential of the proposed system.

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