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1.
RSC Adv ; 14(27): 19539-19549, 2024 Jun 12.
Article in English | MEDLINE | ID: mdl-38895531

ABSTRACT

Ascorbic acid plays a pivotal role in the human body. It maintains the robustness, enlargement, and elasticity of the collagen triple helix. However, the abnormal concentration of ascorbic acid causes various diseases, such as scurvy, cardiovascular diseases, gingival bleeding, urinary stones, diarrhea, stomach convulsions, etc. In the present work, an iron-doped hydroxyapatite (HAp@Fe2O3)-based biosensor was developed for the colorimetric detection of ascorbic acid based on a low-cost, biocompatible, and ubiquitous material. Due to the catalytic nature of HAp owing to the acidic and basic moieties within the structure, it was used as a template for HAp@Fe2O3 synthesis. This approach provides an active as well as large surface area for the sensing of ascorbic acid. The synthesized platform was characterized by various techniques, such as UV-Vis, FTIR, SEM, XRD, TGA, EDX, etc. The HAp@Fe2O3 demonstrated inherent peroxidase-like activity in the presence of 3,3',5,5'-tetramethylbenzidine (TMB) oxidized with the assistance of H2O2. It resulted in the color changing to blue-green, and after the addition of ascorbic acid, the color changed to colorless, resulting in the reduction of TMB. To achieve optimal sensing parameters, experimental conditions were optimized. The quantity of HAp@Fe2O3, H2O2, pH, TMB, time, and the concentration of ascorbic acid were fine-tuned. The linear range for the proposed sensor was 0.6-56 µM, along with a limit of detection of 0.16 µM and a limit of quantification of 0.53 µM. The proposed sensor detects ascorbic acid within 75 seconds at room temperature. The proposed platform was also applied to quantitatively check the concentration of ascorbic acid in a physiological solution.

2.
J Mol Model ; 29(8): 262, 2023 Jul 25.
Article in English | MEDLINE | ID: mdl-37490167

ABSTRACT

CONTEXT: The organic solar cells (OSCs) are being developed with the goal of improving their photovoltaic capabilities. Here, utilizing computational methods, six new nonfullerene acceptors (NFA) comprising dyes (A1-A6) have been created by end-group alterations of the Y123 framework as a standard (R). METHODS: The DFT-based investigations at B3LYP/6-31G + (d,p) level were applied to evaluate their properties. The planar geometries associated with these structures, which lead to improved conjugation, were validated by the estimation of molecular geometries. Dyes A1-A6 have shorter Egap than R, according to a frontier molecular orbital (FMO) investigation, which encourages charge transfer in them. The dyes with their maximum absorption range were shown by optical properties to be 692-711 nm, which is significantly better than R with its 684 nm range. Their electrostatic and Mulliken charge patterns provided additional evidence of the significant separation of charges within these structures. All the dyes A1-A6 had improved light harvesting efficiency (LHE) values as compared to Y123, highlighting their improved capacity to generate charge carriers by light absorption. With the exception of dye A4, all newly developed dyes might have a superior rate of charge carrier mobility than R, according to reorganization energies λre. Dyes A3 and A4 had the greatest open-circuit voltage (Voc). Dye A3 exhibited improvement in all of its examined properties, making it a promising choice in DSSC applications.

3.
J Mol Graph Model ; 124: 108538, 2023 11.
Article in English | MEDLINE | ID: mdl-37327646

ABSTRACT

A series of new organic dyes (T1-T6) with nonfullerene acceptors have been theoretically designed around the chemical structure of tyrian purple (T) natural dye. For their ground state energy parameters, all the molecular geometries of those dyes were optimized by density functional theory (DFT) at its Becke, 3-parameter, Lee-Yang-Parr (B3LYP) level of theory with 6-31G+(d,p) basis sets. When benchmarking against several long range and range separated levels of theory, the Coulomb attenuated B3LYP (CAM-B3LYP) produced most accurate absorption maxima (λmax) value to that of T so it was further employed for further Time dependent DFT (TD-DFT) calculations. Frontier molecular orbitals (FMOs) with natural bond orbital (NBO) studies were used to study their intra molecular charge transfer (ICT). All of the dyes had their energy gaps (Eg) values between their FMOs to range around 0.96-3.39 eV, whereas the starting reference dye had an Eg of 1.30 eV. Their ionization potential (IP) values were ranged to be 3.07-7.25 eV which indicated their nature to loss electrons. The λ max in chloroform was marginally red-shifted with a value 600-625 from T (580 nm). The dye T6 showed its highest linear polarizability (<α>), and first and second order hyperpolarizabilities (ß and γ). The synthetic experts can find the present research to design finest NLO materials for current and future uses.


Subject(s)
Coloring Agents , Models, Molecular , Coloring Agents/chemistry , Density Functional Theory
4.
Biometals ; 35(3): 519-548, 2022 06.
Article in English | MEDLINE | ID: mdl-35352236

ABSTRACT

The present study presents synthesis, characterization and first principle studies on metal chelates, (1-12), of sulfonamide-isatin reacted ligands (S1-S3). All the products were evaluated by various physical and spectral (UV, IR, NMR, MS) means. The octahedral geometry for Co+2, Ni+2 and Zn+2, while square planner geometry for Cu+2 chelates were confirmed by their spectroscopic and magnetic data. Their physical chemistry investigation show the ability of aromatic rings to stabilize sulfonamide rings across NH-π interactions at their optimized geometries. The nonlinear optical response for all the compounds disclosed that the z-axis has the most contributions. An efficient electron injection and hole studies for Au and Al electrodes having the energies of - 0.1-3.1 and 0.0-11.8 eV respectively were noted. Their bioactive character was shown by global reactivity calculated from FMO energy gaps. The enzyme inhibitory results were found to be 45-61% and IC50 = 102-122 µL, for compound (4), (10), (8), (5) and (12) against the amylase, protease, acetylcholinesterase (AChE), and butyrylcholinesterase (BChE) respectively The antibacterial findings showed significant action having 11-17 mm for (2), (7) and (10) for bacterial species, Escherichia coli and Micrococcus luteus. The DPPH and ferric reducing power assay was used to evaluate the antioxidant capacity with 49.0 ± 0.09-66.2 ± 0.08% and IC50 = 102.3-122.4 µL range. In comparison to ligands, the results showed that all metal chelates had higher bioactivity. The chelation was the primary cause of their increased bioactivity. These findings suggested that such metal-based compounds might be used as antimicrobial, and antioxidant options in future to cope drug resistance.


Subject(s)
Butyrylcholinesterase , Isatin , Acetylcholinesterase , Anti-Bacterial Agents/chemistry , Antioxidants/pharmacology , Chelating Agents/pharmacology , Drug Design , Ligands , Sulfonamides
5.
ACS Omega ; 6(48): 33085-33099, 2021 Dec 07.
Article in English | MEDLINE | ID: mdl-34901660

ABSTRACT

During the current study, the new aminothiazole Schiff base ligands (S1 ) and (S2 ) were designed by reacting 1,3-thiazol-2-amine and 6-ethoxy-1,3-benzothiazole-2-amine separately with 3-methoxy-2-hydroxybenzaldehyde in good yields (68-73%). The ligands were characterized through various analytical, physical, and spectroscopic (FT-IR, UV-Vis, 1H and 13C NMR, and MS) methods. The ligands were exploited in lieu of chelation with bivalent metal (cobalt, nickel, copper, and zinc) chlorides in a 1:2 (M:L) ratio. The spectral (UV-Vis, FT-IR, and MS), as well as magnetic, results suggested their octahedral geometry. The theoretically optimized geometrical structures were examined using the M06/6-311G+(d,p) function of density function theory. Their bioactive nature was designated by global reactivity parameters containing a high hardness (η) value of 1.34 eV and a lower softness (σ) value of 0.37 eV. Different microbial species were verified for their potency (in vitro), revealing a strong action. The Gram-positive Micrococcus luteus and Gram-negative Escherichia coli gave the highest activities of 20 and 21 mm for compounds (8) and (7), respectively. The antifungal activity against the Aspergillus niger and Aspergillus terreus species gave the highest activities of 20 and 18 mm for compounds (7) and (6), respectively. The antioxidant activity, evaluated as DPPH and ferric reducing power, gave the highest inhibition (%) as 72.0 ± 0.11% (IC50 = 144 ± 0.11 µL) and 66.3% (IC50 = 132 ± 0.11 µL) for compounds (3) and (8), respectively. All metal complexes were found to be more biocompatible than free ligands due to their chelation phenomenon. The energies of LUMOs had a link with their activities.

6.
Mol Plant Microbe Interact ; 19(4): 418-28, 2006 Apr.
Article in English | MEDLINE | ID: mdl-16610745

ABSTRACT

A collection of 905 bacterial isolates from the rhizospheres of healthy avocado trees was obtained and screened for antagonistic activity against Dematophora necatrix, the cause of avocado Dematophora root rot (also called white root rot). A set of eight strains was selected on the basis of growth inhibitory activity against D. necatrix and several other important soilborne phytopathogenic fungi. After typing of these strains, they were classified as belonging to Pseudomonas chlororaphis, Pseudomonas fluorescens, and Pseudomonas putida. The eight antagonistic Pseudomonas spp. were analyzed for their secretion of hydrogen cyanide, hydrolytic enzymes, and antifungal metabolites. P. chlororaphis strains produced the antibiotic phenazine-1-carboxylic acid and phenazine-1-carboxamide. Upon testing the biocontrol ability of these strains in a newly developed avocado-D. necatrix test system and in a tomato-F oxysporum test system, it became apparent that P. fluorescens PCL1606 exhibited the highest biocontrol ability. The major antifungal activity produced by strain P. fluorescens PCL1606 did not correspond to any of the major classes of antifungal antibiotics produced by Pseudomonas biocontrol strains. This compound was purified and subsequently identified as 2-hexyl 5-propyl resorcinol (HPR). To study the role of HPR in biocontrol activity, two Tn5 mutants of P. fluorescens PCL1606 impaired in antagonistic activity were selected. These mutants were shown to impair HRP production and showed a decrease in biocontrol activity. As far as we know, this is the first report of a Pseudomonas biocontrol strain that produces HPR in which the production of this compound correlates with its biocontrol activity.


Subject(s)
Ascomycota/physiology , Persea/microbiology , Pest Control, Biological , Plant Diseases/microbiology , Plant Roots/microbiology , Pseudomonas fluorescens/metabolism , Fusarium/metabolism , Molecular Sequence Data , Molecular Structure , Pseudomonas fluorescens/classification , Resorcinols/chemistry , Resorcinols/metabolism
7.
Chem Biol ; 12(9): 1029-40, 2005 Sep.
Article in English | MEDLINE | ID: mdl-16183027

ABSTRACT

Rhizobium tropici CIAT899 has been cataloged as a nodulator of bean, a plant often growing in areas characterized by highly acidic soils. The purpose of this work was to explore the effects of acidity on the production of Nod factors by this strain and their impact on the establishment of effective symbioses. We report that acidity increases rhizobial Nod factors production, and we exhaustively study the nodulation factor structures produced under abiotic stress. Significant differences were observed between the structures produced at acid and neutral pH: 52 different molecules were produced at acid pH, 29 at neutral pH, and only 15 are common to bacteria grown at pH 7.0 or 4.5. The results indicate that R. tropici CIAT899 has successfully adapted to life in acidic soils and is a good inoculant for the bean under these conditions.


Subject(s)
Hydrogen-Ion Concentration , Lipopolysaccharides/biosynthesis , Rhizobium tropici/metabolism , Adaptation, Physiological , Gene Expression , Lipopolysaccharides/isolation & purification , Mass Spectrometry , Methylation , Nitrogen Fixation/genetics , Phaseolus/growth & development , Phaseolus/microbiology , Rhizobium tropici/physiology
8.
Funct Plant Biol ; 30(12): 1219-1232, 2003 Jan.
Article in English | MEDLINE | ID: mdl-32689103

ABSTRACT

Rhizobium strain 042B(s) is able to nodulate both soybean and alfalfa cultivars. We have demonstrated, by mass spectrometry, that the nodulation (Nod) factors produced by this strain are characteristic of those produced by Sinorhizobium fredii, which typically nodulates soybean; they have 3-5 N-acetylglucosamine (GlcNAc) residues, a mono-unsaturated or saturated C16, C18 or C20 fatty-acyl chain, and a (methyl)fucosyl residue on C6 of the reducing-terminal GlcNAc. In order to study Rhizobium strain 042B(s) and its nodulation behaviour further, we introduced an insertion mutation in the noeL gene, which is responsible for the presence of the (methyl)fucose residue on the reducing terminal GlcNAc of the Nod-factors, yielding mutant strain SVQ523. A plasmid (pHM500) carrying nodH, nodP and nodQ, the genes involved in sulfation of Nod-factors on C6 of the reducing-terminal GlcNAc, was introduced into SVQ523, generating SVQ523.pHM500. As expected, strain SVQ523 produces unfucosylated Nod-factors, while SVQ523.pHM500 produces both unfucosylated and unfucosylated sulfated Nod-factors. Plant tests showed that soybean nodulation was reduced if the inoculant (SVQ523.pHM500) produced sulfated Nod-factors. In the Asiatic alfalfa cultivar Baoding, SVQ523 (absence of a substitution at C6) failed to nodulate, but both 042B(s) (fucosyl at C6) and SVQ523.pHM500 (sulfate at C6) formed nodules. In contrast, SVQ523 showed enhanced nodulation capacity with the western alfalfa cultivars ORCA and ARC. These results indicate that Nod-factor sulfation is not a requisite for S. fredii to nodulate alfalfa.

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