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1.
CRISPR J ; 6(1): 17-31, 2023 02.
Article in English | MEDLINE | ID: mdl-36629845

ABSTRACT

Ganglioside-monosialic acid (GM1) gangliosidosis, a rare autosomal recessive disorder, is frequently caused by deleterious single nucleotide variants (SNVs) in GLB1 gene. These variants result in reduced ß-galactosidase (ß-gal) activity, leading to neurodegeneration associated with premature death. Currently, no effective therapy for GM1 gangliosidosis is available. Three ongoing clinical trials aim to deliver a functional copy of the GLB1 gene to stop disease progression. In this study, we show that 41% of GLB1 pathogenic SNVs can be replaced by adenine base editors (ABEs). Our results demonstrate that ABE efficiently corrects the pathogenic allele in patient-derived fibroblasts, restoring therapeutic levels of ß-gal activity. Off-target DNA analysis did not detect off-target editing activity in treated patient's cells, except a bystander edit without consequences on ß-gal activity based on 3D structure bioinformatics predictions. Altogether, our results suggest that gene editing might be an alternative strategy to cure GM1 gangliosidosis.


Subject(s)
Gangliosidosis, GM1 , Humans , Gangliosidosis, GM1/therapy , Gangliosidosis, GM1/drug therapy , beta-Galactosidase/genetics , beta-Galactosidase/chemistry , beta-Galactosidase/metabolism , Gene Editing , CRISPR-Cas Systems/genetics , Alleles
2.
Eur J Hum Genet ; 30(2): 219-228, 2022 02.
Article in English | MEDLINE | ID: mdl-34707299

ABSTRACT

Premature ovarian insufficiency (POI), affecting 1 in 100 women, is characterised by loss of ovarian function associated with elevated gonadotropin, before the age of 40. In addition to infertility, patients face increased risk of comorbidities such as heart disease, osteoporosis, cancer and/or early mortality. We used whole exome sequencing to identify the genetic cause of POI in seven women. Each had biallelic candidate variants in genes with a primary role in DNA damage repair and/or meiosis. This includes two genes, REC8 and HROB, not previously associated with autosomal recessive POI. REC8 encodes a component of the cohesin complex and HROB encodes a factor that recruits MCM8/9 for DNA damage repair. In silico analyses, combined with concordant mouse model phenotypes support these as new genetic causes of POI. We also identified novel variants in MCM8, NUP107, STAG3 and HFM1 and a known variant in POF1B. Our study highlights the pivotal role of meiosis in ovarian function. We identify novel variants, consolidate the pathogenicity of variants previously considered of unknown significance, and propose HROB and REC8 variants as new genetic causes while exploring their link to pathogenesis.


Subject(s)
Primary Ovarian Insufficiency , Animals , Cell Cycle Proteins/genetics , Chromosomes , DNA Helicases/genetics , DNA-Binding Proteins , Female , Humans , Meiosis/genetics , Mice , Phenotype , Primary Ovarian Insufficiency/genetics , Primary Ovarian Insufficiency/pathology , Exome Sequencing
3.
Mol Hum Reprod ; 26(9): 665-677, 2020 09 01.
Article in English | MEDLINE | ID: mdl-32634216

ABSTRACT

Infertility, a global problem affecting up to 15% of couples, can have varied causes ranging from natural ageing to the pathological development or function of the reproductive organs. One form of female infertility is premature ovarian insufficiency (POI), affecting up to 1 in 100 women and characterised by amenorrhoea and elevated FSH before the age of 40. POI can have a genetic basis, with over 50 causative genes identified. Non-obstructive azoospermia (NOA), a form of male infertility characterised by the absence of sperm in semen, has an incidence of 1% and is similarly heterogeneous. The genetic basis of male and female infertility is poorly understood with the majority of cases having no known cause. Here, we study a case of familial infertility including a proband with POI and her brother with NOA. We performed whole-exome sequencing (WES) and identified a homozygous STAG3 missense variant that segregated with infertility. STAG3 encodes a component of the meiosis cohesin complex required for sister chromatid separation. We report the first pathogenic homozygous missense variant in STAG3 and the first STAG3 variant associated with both male and female infertility. We also demonstrate limitations of WES for the analysis of homologous DNA sequences, with this variant being ambiguous or missed by independent WES protocols and its homozygosity only being established via long-range nested PCR.


Subject(s)
Azoospermia/genetics , Cell Cycle Proteins/genetics , Mutation, Missense , Primary Ovarian Insufficiency/genetics , Adult , Consanguinity , Female , Homozygote , Humans , Infertility, Female/genetics , Infertility, Male/genetics , Male , Pedigree , Siblings
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