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1.
Bioengineering (Basel) ; 11(3)2024 Feb 28.
Article in English | MEDLINE | ID: mdl-38534509

ABSTRACT

The majority of contemporary total hip arthroplasty (THA) implants are constructed from Ti alloys, which are generally believed to generate fewer adverse local tissue reactions (ALTRs) compared to CoCr alloys. This study presents a case of unusual primary THA failure where a substantial release of Ti alloy debris was observed. A 52-year-old active male underwent THA after post-traumatic aseptic necrosis of the femoral head in 2006. Seventeen years after the procedure, the patient presented with groin pain and a restricted range of motion. X-rays revealed the protrusion of the alumina ceramic head through the Ti6Al4V acetabular cup. Trace element analysis indicated significantly elevated levels of serum Ti, Al, and V. CT and MRI confirmed Ti alloy cup failure and a severe ALTR. During revision surgery, it was found that the worn-out ceramic head was in direct contact with the acetabular cup, having protruded through a central hole it had created over time. No acetabular liner was found. Histological analysis of his tissue samples showed wear-induced synovitis with areas of multinucleated foreign body giant cells and the accumulation of numerous metal particles but no acute inflammatory response. Six months after the revision THA, the patient has experienced favourable outcomes. This case provides an instructive illustration for studying the consequences of the substantial release of Ti alloy debris from orthopedic implants.

2.
Materials (Basel) ; 15(7)2022 Mar 31.
Article in English | MEDLINE | ID: mdl-35407908

ABSTRACT

Porous tantalum has been extensively used in orthopaedic surgery, including uncemented total knee arthroplasty (TKA). Favourable results were reported with earlier monobloc tibial components and the design evolved to modular implants. We aimed to analyse possible causes for extensive medial tibia bone loss, resulting in modular porous tantalum tibia baseplate fracture after primary TKA. Retrieved tissue samples were scanned with 3 MeV focused proton beam for Proton-Induced X-ray Emission (micro-PIXE) elemental analysis. Fractographic and microstructural analysis were performed by stereomicroscopy. A full 3D finite-element model was made for numerical analysis of stress-strain conditions of the tibial baseplate. Histological examination of tissue underneath the broken part of the tibial baseplate revealed dark-stained metal debris, which was confirmed by micro-PIXE to consist of tantalum and titanium. Fractographic analysis and tensile testing showed that the failure of the tibial baseplate fulfilled the criteria of a typical fatigue fracture. Microstructural analysis of the contact surface revealed signs of bone ingrowth in 22.5% of the surface only and was even less pronounced in the medial half of the tibial baseplate. Further studies are needed to confirm the responsibility of metal debris for an increased bone absorption leading to catastrophic tibial tray failure.

3.
Polymers (Basel) ; 14(6)2022 Mar 20.
Article in English | MEDLINE | ID: mdl-35335582

ABSTRACT

A procedure is described of grafting the acrylic acid onto an oxygen/ozone-activated metallocene poly(ethylene-co-propylene). Consequently, the grafted copolymer is applied as a component in a metallocene polyolefin-based hot-melt adhesive composition with increased adhesion. The surface properties and adhesion strength of the prepared hot-melt adhesive (HMA) were determined and used to account for the effect of grafting. The application of grafted polyolefin as one of the components of the HMA mixture provides significant increase in adhesive strength, and it also results in increased compatibility and negligible effects on the technological parameters of the final composition. The obtained results may have significant impact for the practical application of prepared HMA for book bonding.

4.
Spectrochim Acta A Mol Biomol Spectrosc ; 264: 120268, 2022 Jan 05.
Article in English | MEDLINE | ID: mdl-34450573

ABSTRACT

The computational simulation of the photoelectron spectrum of active form of vitamin B2 is reported in the gas phase. In this work, we determine relative stability of eight riboflavin conformers by conformational search first with molecular mechanics AMMP potential in VEGA software at 553 K. Relative abundance of conformers was deduced from Boltzmann population weighting method (BPW). The three most stable conformers were then selected for computing valence, vertical ionization energies. We used high-level Equation-of-Motion Coupled-Cluster (EOM-IP-CCSD) method to obtain valence ionization energies (IP). In order to characterize the nature of ionization processes pertaining to different spectral bands, natural bonding orbital (NBO) method and molecular electrostatic potentials (MEP) were used to obtain orbital electron densities. The influence of the electronic structure of riboflavin on its biological activity is manifested via reduction of ionization energies of outermost orbitals which makes electron densities of these orbitals more readily available to participate in ligand-receptor bonding.


Subject(s)
Electronics , Riboflavin , Computer Simulation , Molecular Conformation
5.
Materials (Basel) ; 14(13)2021 Jun 30.
Article in English | MEDLINE | ID: mdl-34209330

ABSTRACT

Poly(lactide) (PLA) films obtained by thermoforming or solution-casting were modified by diffuse coplanar surface barrier discharge plasma (300 W and 60 s). PLA films were used as hot-melt adhesive in joints in oak wood. It was demonstrated that lap shear strength increased from 3.4 to 8.2 MPa, respectively, for the untreated and plasma-treated series. Pull-off tests performed on particleboard for the untreated and treated PLA films showed 100% cohesive failure. Pull-off strength tests on solid oak demonstrated adhesion enhancement from 3.3 MPa with the adhesion failure mode to 6.6 MPa with the cohesion failure mode for untreated and treated PLA. XPS revealed that carbonyl oxygen content increased by two-to-three-fold, which was confirmed in the Fourier-transform infrared spectroscopy experiments of the treated PLA. The water contact angle decreased from 66.4° for the pristine PLA to 49.8° after treatment. Subsequently, the surface free energy increased from 47.9 to 61.05 mJ/m2. Thus, it was clearly proven that discharge air plasma can be an efficient tool to change surface properties and to strengthen adhesive interactions between PLA and woody substrates.

6.
Biochem Mol Biol Educ ; 49(3): 333-345, 2021 05.
Article in English | MEDLINE | ID: mdl-33096589

ABSTRACT

Ionization of amino acids (AA) is very important concept in biochemistry. We integrate the mathematical concept of probability with biochemically relevant process of AA ionization. We visualize the ionization process with Mathematica software discussing intramolecular interactions between weakly acidic/basic functional groups and charge-pH variation of amino acids in water solution. The visualizations rely on the notion of probability of ionization of functional groups and demonstrate how the extent of ionization and charge varies with pH of the solution. The examples described include amino acids and weak diprotic acids and bases. The aim is to help students better appreciate the importance and consequences of AA ionization and correct some misconceptions.


Subject(s)
Acids/chemistry , Amino Acids/analysis , Amino Acids/chemistry , Biochemistry/methods , Mathematical Computing , Students/statistics & numerical data , Humans , Hydrogen-Ion Concentration
7.
Phys Chem Chem Phys ; 22(43): 25396-25407, 2020 Nov 21.
Article in English | MEDLINE | ID: mdl-33141120

ABSTRACT

Compounds containing trivalent boron (TB) as the electron-deficient site(s) find numerous practical uses ranging from Lewis bases in organic synthesis to high-tech industry, with a number of novel applications anticipated. We present an experimental and theoretical study of the gas-phase valence photoionization (VUV-PES), core photoionization (XPS) and photoexcitation (NEXAFS) spectra of a representative TB compound catecholborane (CB). For modelling and assigning the spectra we used the ΔDFT and restricted single excitation space TD-DFT methods for the XPS and NEXAFS, and OVGF and EOM-CCSD for the VUV-PES. The vibrationally resolved structure was computed in the Franck-Condon (FC) and Herzberg-Teller (FCHT) approximations generally resulting in a good agreement with the observed spectral features. For the prediction of core-electron binding energies (CEBEs) several density functionals were tested. The best performance overall was furnished by ωB97X-D suggesting that including the dispersion correction is beneficial. The FCHT vibronic intensities are in clear discrepancy with the B 1s NEXAFS spectrum if the harmonic approximation is used for the B-H wagging mode both in the ground and in the first core-excited state. Instead, a much better agreement is obtained if the excited state potential is approximated to a symmetric double-well. The observed vibronic pattern could be a general fingerprint of the presence of TB centre(s), specifically, the transfer of the (core) density to the vacant boron p-orbital in the excited state.

8.
J Orthop Surg (Hong Kong) ; 27(2): 2309499019842490, 2019.
Article in English | MEDLINE | ID: mdl-30987501

ABSTRACT

The objective of study was to evaluate a case series of patients in whom polyetheretherketone (PEEK) cages were used for anterior column reconstruction in vertebral osteomyelitis. Fifteen patients underwent clinical and radiological evaluation with average follow-up of 26 months. Parameters assessed were time of surgery, blood loss, segmental kyphosis or lordosis angle, time to solid bony fusion, ambulatory status, and functional outcome. Mean time of surgery was 150 min with mean blood loss of 530 ml. One patient died in early postoperative period. All patients without preoperative neurologic deficit were walking unaided first day postoperatively. Solid bony fusion was demonstrated in 14 patients, on average 7.1 months postoperatively. Functional outcome at the latest follow-up was excellent, good, or fair in 86%. Two failures with recurrent infection were treated with PEEK cage removal and reinstrumentation. High success rate could be expected when PEEK cages are used for anterior column support in pyogenic vertebral osteomyelitis.


Subject(s)
Internal Fixators , Ketones , Osteomyelitis/surgery , Polyethylene Glycols , Spinal Fusion/instrumentation , Adult , Aged , Aged, 80 and over , Benzophenones , Cohort Studies , Female , Humans , Kyphosis , Lordosis , Male , Middle Aged , Osteomyelitis/etiology , Polymers , Titanium , Treatment Outcome
9.
Phys Chem Chem Phys ; 20(4): 2480-2491, 2018 Jan 24.
Article in English | MEDLINE | ID: mdl-29313539

ABSTRACT

Insights into the electronic structure of galvinoxyl - a prototype persistent free radical species - are of interest to elucidate its attractive photophysical and magnetic properties and to pave way for a sensible design of novel applications. To this end, we study the photoionization and photoexcitation UPS, XPS and NEXAFS spectra of the gas-phase galvinoxyl in the valence and core (C 1s and O 1s) regions using synchrotron X-ray radiation. We observe significant variations of relative band intensities with photon energy for valence ionizations below 10 eV which are rationalized in terms of the properties of the corresponding valence molecular orbitals. We calculate the core electron binding energies and core-excited states by employing the spin-unrestricted ΔDFT (B3LYP, M06-2X, and ωB97xD) and time-dependent DFT (SRC2-BLYP) methods. A good correlation between the calculations and the measured C 1s and O 1s XPS and NEXAFS spectra is obtained if one assumes that the galvinoxyl sample has undergone a partial degradation (around 50%) to the saturated (closed-shell) phenolic-quinonic derivative known as galvinol. We carry out a comparative theoretical analysis of the XPS and NEXAFS spectra of galvinoxyl and galvinol by assigning the relevant absorptions and pointing out the most important relative differences. The calculations identify a band in the O 1s NEXAFS spectrum whose diminishing intensity is a most manifest indicator of the extent of the degradation. Such a feature may thus prove useful in monitoring the scavenging dynamics of galvinoxyl using the core-excitation spectroscopy.

10.
Spectrochim Acta A Mol Biomol Spectrosc ; 189: 129-132, 2018 Jan 15.
Article in English | MEDLINE | ID: mdl-28806697

ABSTRACT

The electronic structures of several derivatives of cinnamic acid have been studied by UV photoelectron spectroscopy (UPS) and Green's function quantum chemical calculations. The spectra reveal the presence of dimers in the gas phase for p-coumaric and ferulic acids. The electronic structure analysis has been related to the biological properties of these compounds through the analysis of some structure-activity relationships (SAR).


Subject(s)
Cinnamates/chemistry , Cinnamates/pharmacology , Photoelectron Spectroscopy , Electrons , Structure-Activity Relationship
11.
PLoS Comput Biol ; 13(11): e1005862, 2017 Nov.
Article in English | MEDLINE | ID: mdl-29136638

ABSTRACT

To understand shapes and movements of cells undergoing lamellipodial motility, we systematically explore minimal free-boundary models of actin-myosin contractility consisting of the force-balance and myosin transport equations. The models account for isotropic contraction proportional to myosin density, viscous stresses in the actin network, and constant-strength viscous-like adhesion. The contraction generates a spatially graded centripetal actin flow, which in turn reinforces the contraction via myosin redistribution and causes retraction of the lamellipodial boundary. Actin protrusion at the boundary counters the retraction, and the balance of the protrusion and retraction shapes the lamellipodium. The model analysis shows that initiation of motility critically depends on three dimensionless parameter combinations, which represent myosin-dependent contractility, a characteristic viscosity-adhesion length, and a rate of actin protrusion. When the contractility is sufficiently strong, cells break symmetry and move steadily along either straight or circular trajectories, and the motile behavior is sensitive to conditions at the cell boundary. Scanning of a model parameter space shows that the contractile mechanism of motility supports robust cell turning in conditions where short viscosity-adhesion lengths and fast protrusion cause an accumulation of myosin in a small region at the cell rear, destabilizing the axial symmetry of a moving cell.


Subject(s)
Cell Movement/physiology , Pseudopodia/physiology , Actins/metabolism , Actins/physiology , Biomechanical Phenomena , Cell Shape/physiology , Models, Theoretical , Myosins/metabolism , Myosins/physiology
12.
J Biomed Mater Res A ; 105(11): 3176-3188, 2017 Nov.
Article in English | MEDLINE | ID: mdl-28707422

ABSTRACT

Poly(lactic acid) (PLA) has shown much success in the preparation of tissue engineering scaffolds as it can be fabricated with a tailored architecture. However, the PLA surface has drawbacks including the lack of biofunctional motifs which are essential for high affinity to biological cells. Therefore, this study describes a multistep physicochemical approach for the immobilization of d-glucosamine (GlcN), a naturally occurring monosaccharide having many biological functions, on the PLA surface aiming at enhancing the cell proliferation activity. In this approach, poly(acrylic acid) (PAAc) spacer arms are first introduced into the PLA surface via plasma post-irradiation grafting technique. Then, covalent coupling or physical adsorption of GlcN with/on the PAAc spacer is carried out. Factors affecting the grafting yield are controlled to produce a suitable spacer for bioimmobilization. X-ray photon spectroscopic (XPS) analyses confirm the immobilization of GlcN on the PLA surface. The XPS results reveal also that increasing the yield of grafted PAAc spacer on the PLA surface increases the amount of covalently immobilized GlcN, but actually inhibits the immobilization process using the physical adsorption method. Contact angle measurements and atomic force microscopy (AFM) show a substantial increase of surface energy and roughness of PLA surface, respectively, upon the multistep modification procedure. The cytocompatibility of the modified surfaces is assessed using a mouse embryonic fibroblast (MEF) cell line. Observation from the cell culture basically demonstrates the potential of GlcN immobilization in improving the cytocompatibility of the PLA surface. Moreover, the covalent immobilization of GlcN seems to produce more cytocompatible surfaces if compared with the physical adsorption method. © 2017 Wiley Periodicals, Inc. J Biomed Mater Res Part A: 105A: 3176-3188, 2017.


Subject(s)
Biocompatible Materials/chemistry , Glucosamine/chemistry , Polyesters/chemistry , Adsorption , Animals , Cell Line , Cell Proliferation , Fibroblasts/cytology , Kinetics , Mice , Microscopy, Atomic Force , Surface Properties , Tissue Scaffolds/chemistry
13.
Mol Biol Cell ; 28(8): 1021-1033, 2017 Apr 15.
Article in English | MEDLINE | ID: mdl-28228546

ABSTRACT

Dendritic filopodia are actin-filled dynamic subcellular structures that sprout on neuronal dendrites during neurogenesis. The exploratory motion of the filopodia is crucial for synaptogenesis, but the underlying mechanisms are poorly understood. To study filopodial motility, we collected and analyzed image data on filopodia in cultured rat hippocampal neurons. We hypothesized that mechanical feedback among the actin retrograde flow, myosin activity, and substrate adhesion gives rise to various filopodial behaviors. We formulated a minimal one-dimensional partial differential equation model that reproduced the range of observed motility. To validate our model, we systematically manipulated experimental correlates of parameters in the model: substrate adhesion strength, actin polymerization rate, myosin contractility, and the integrity of the putative microtubule-based barrier at the filopodium base. The model predicts the response of the system to each of these experimental perturbations, supporting the hypothesis that our actomyosin-driven mechanism controls dendritic filopodia dynamics.


Subject(s)
Actomyosin/metabolism , Cell Movement/physiology , Dendrites/physiology , Neurons/physiology , Pseudopodia/physiology , Actin Cytoskeleton/metabolism , Animals , Cells, Cultured , Dendrites/metabolism , Hippocampus/cytology , Hippocampus/metabolism , Hippocampus/physiology , Microtubules/metabolism , Models, Molecular , Neurogenesis , Neurons/cytology , Neurons/metabolism , Pseudopodia/metabolism , Rats , Rats, Sprague-Dawley
14.
PLoS Comput Biol ; 12(12): e1005236, 2016 12.
Article in English | MEDLINE | ID: mdl-27959915

ABSTRACT

Hybrid deterministic-stochastic methods provide an efficient alternative to a fully stochastic treatment of models which include components with disparate levels of stochasticity. However, general-purpose hybrid solvers for spatially resolved simulations of reaction-diffusion systems are not widely available. Here we describe fundamentals of a general-purpose spatial hybrid method. The method generates realizations of a spatially inhomogeneous hybrid system by appropriately integrating capabilities of a deterministic partial differential equation solver with a popular particle-based stochastic simulator, Smoldyn. Rigorous validation of the algorithm is detailed, using a simple model of calcium 'sparks' as a testbed. The solver is then applied to a deterministic-stochastic model of spontaneous emergence of cell polarity. The approach is general enough to be implemented within biologist-friendly software frameworks such as Virtual Cell.


Subject(s)
Cell Biology , Computational Biology/methods , Computer Simulation , Models, Biological , Algorithms , Calcium/metabolism , Cell Polarity , Reproducibility of Results , Stochastic Processes
15.
Colloids Surf B Biointerfaces ; 148: 59-65, 2016 Dec 01.
Article in English | MEDLINE | ID: mdl-27591571

ABSTRACT

The aim of this study was to develop the potential tissue engineering applications of d-glucosamine (GlcN) immobilized onto the surface of a biodegradable matrix in order to induce a desired biological effect at biointerfaces. Thus, for sample preparation we used a novel multistep physicochemical approach. In the first step the poly(lactic acid) (PLA) films were exposed to a low pressure plasma in air atmosphere, followed by radical graft copolymerization with acrylic acid to yield a carboxyl-functionalized spacer layer on the PLA surface. The carboxyl groups were then coupled to GlcN molecules via the carbodiimide chemistry. The developed surfaces were characterized by X-ray Photoelectron Spectroscopy (XPS), Contact angle measurements and Atomic Force Microscopy (AFM). A preliminary study on the proliferation of fibroblasts on the developed surfaces was performed using the NIH/3T3 cell line.


Subject(s)
Biocompatible Materials/chemistry , Glucosamine/chemistry , Polyesters/chemistry , Regeneration , Tissue Engineering , Cell Proliferation , Microscopy, Atomic Force , Photoelectron Spectroscopy , Surface Properties , Wettability
16.
Phys Chem Chem Phys ; 17(16): 10656-67, 2015 Apr 28.
Article in English | MEDLINE | ID: mdl-25804194

ABSTRACT

The photoionization of three N-heterocyclic carbenes (NHCs) has been studied in the valence and core regions using synchrotron radiation. We observed different variations in the relative band intensities with photon energy for the NHCs in the valence ionization region. This is due to the intra-ring interactions between the C=C bond, nitrogen and carbene lone pairs in the heterocyclic ring of NHCs. In the core ionization region we observed chemical shifts which are consistent with the relative electron affinities of atoms and intramolecular electron density shifts. The core electron binding energies calculated via the unrestricted ΔDFT (B3LYP and M06-2X) approach are in very good agreement with the experiment. The shake-up portion of the core photoionization spectra is adequately described by the time-dependent DFT calculations relying on the CAM-B3LYP functional.

17.
Biodegradation ; 26(1): 15-27, 2015 Feb.
Article in English | MEDLINE | ID: mdl-25231938

ABSTRACT

The sequence of redox reactions in the natural environment generally follows the electron affinity of the electron acceptors present and can be rationalized by the redox potentials of the appropriate half-reactions. Answering the question how halogenated aromatics fit into this sequence requires information on their Gibbs free energy of formation values. In 1992 Gibbs free energy data for various classes of halogenated aromatic compounds were systematically explored for the first time based on Benson's group contribution method. Since then more accurate quantum chemical calculation methods have become available. Here we use these methods to estimate enthalpy and Gibbs free energy of formation values of all chlorinated and brominated phenols. These data and similar state-of-the-art datasets for halogenated benzenes and benzoates were then used to calculate two-electron redox potentials of halogenated aromatics for standard conditions and for pH 7. The results underline the need to take speciation into consideration when evaluating redox potentials at pH 7 and highlight the fact that halogenated aromatics are excellent electron acceptors in aqueous environments.


Subject(s)
Benzene/metabolism , Benzoates/metabolism , Electrons , Halogenation , Phenols/metabolism , Anaerobiosis , Biodegradation, Environmental , Hydrogen-Ion Concentration , Oxidation-Reduction , Quantum Theory , Reproducibility of Results , Thermodynamics
18.
Article in English | MEDLINE | ID: mdl-25528514

ABSTRACT

The electronic structure of erythromycin A (ERYMA) molecule has been studied by UV photoelectron spectroscopy and assigned (in the low ionization energy region only) by empirical arguments. The two orbitals with highest energy (lowest ionization energy) are localized on the nitrogen of the desosamine sugar functional group and on the ester group of macrolide (lactone) ring. We discuss how these orbital energies can help to rationalize the known mode of binding of ERYMA to their biological receptors.


Subject(s)
Electrons , Erythromycin/chemistry , Anti-Bacterial Agents/chemistry , Erythromycin/pharmacology , Light
19.
Int J Mol Sci ; 15(8): 14684-96, 2014 Aug 21.
Article in English | MEDLINE | ID: mdl-25196604

ABSTRACT

Alginic acid coated polyethylene films were examined in terms of surface properties and bacteriostatic performance against two most representative bacterial strains, that is, Escherichia coli and Staphylococcus aureus. Microwave plasma treatment followed by brush formation in vapor state from three distinguished precursors (allylalcohol, allylamine, hydroxyethyl methacrylate) was carried out to deposit alginic acid on the substrate. Surface analyses via various techniques established that alginic acid was immobilized onto the surface where grafting (brush) chemistry influenced the amount of alginic acid coated. Moreover, alginic acid was found to be capable of bacterial growth inhibition which itself was significantly affected by the brush type. The polyanionic character of alginic acid as a carbohydrate polymer was assumed to play the pivotal role in antibacterial activity. The cell wall composition of two bacterial strains along with the substrates physicochemical properties accounted for different levels of bacteriostatic performance.


Subject(s)
Alginates/chemistry , Anti-Bacterial Agents/chemistry , Anti-Bacterial Agents/pharmacology , Polyethylene/chemistry , Escherichia coli/drug effects , Glucuronic Acid/chemistry , Hexuronic Acids/chemistry , Microbial Sensitivity Tests , Staphylococcus aureus/drug effects
20.
J Comput Phys ; 270: 203-213, 2014 Aug 01.
Article in English | MEDLINE | ID: mdl-25067852

ABSTRACT

We describe a novel conservative algorithm for parabolic problems in domains with moving boundaries developed for modeling in cell biology. The spatial discretization is accomplished by applying Voronoi decomposition to a fixed rectangular grid. In the vicinity of the boundary, the procedure generates irregular Voronoi cells that conform to the domain shape and merge seamlessly with regular control volumes in the domain interior. Consequently, our algorithm is free of the CFL stability issue due to moving interfaces and does not involve cell-merging or mass redistribution. Local mass conservation is ensured by finite-volume discretization and natural-neighbor interpolation. Numerical experiments with two-dimensional geometries demonstrate exact mass conservation and indicate an order of convergence in space between one and two. The use of standard meshing techniques makes extension of the method to three dimensions conceptually straightforward.

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