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1.
Genet Mol Res ; 16(1)2017 Mar 22.
Article in English | MEDLINE | ID: mdl-28340263

ABSTRACT

Myrciaria dubia (camu-camu) is an Amazon tree that produces a tart fruit with high vitamin C content. It is probably the fruit with the highest vitamin C content among all Brazilian fruit crops and it can be used to supplement daily vitamin C dose. This property has attracted the attention of consumers and, consequently, encouraged fruit farmers to produce it. In order to identify and select potential accessions for commercial exploitation and breeding programs, M. dubia has received considerable research attention. The identification and characterization of genetic diversity, as well as identification of the population structure of accessions preserved in germplasm banks are fundamental for the success of any breeding program. The objective of this study was to evaluate the genetic variability of 10 M. dubia populations obtained from the shores of Reis Lake, located in the municipality of Caracaraí, Roraima, Brazil. Fourteen polymorphic inter simple sequence repeat (ISSR) markers were used to study the population genetic diversity, which resulted in 108 identified alleles. Among the 14 primers, GCV, UBC810, and UBC827 produced the highest number of alleles. The study illustrated the suitability and efficiency of ISSR markers to study the genetic diversity of M. dubia accessions. We also revealed the existence of high genetic variability among both accessions and populations that can be exploited in future breeding programs and conservation activities of this species.


Subject(s)
Myrtaceae/genetics , Trees/genetics , Alleles , Brazil , Fruit/chemistry , Fruit/genetics , Fruit/metabolism , Genetic Markers/genetics , Genetic Variation , Microsatellite Repeats , Myrtaceae/growth & development , Myrtaceae/metabolism , Phylogeny , Plant Breeding/methods , Polymorphism, Genetic , Trees/growth & development , Trees/metabolism , Vitamin A/biosynthesis
2.
Arch Virol ; 162(3): 857-861, 2017 Mar.
Article in English | MEDLINE | ID: mdl-27885560

ABSTRACT

Here we determined the relative expression of HERV-K and W proviruses in HIV infected and non-infected mothers as well as their respective babies up to 1 year-old. HIV-infected mothers, their babies and uninfected control groups presented expression of both HERV-K and HERV-W with relatively high frequency. While the level of HERV-K expression was similar among groups, the level of HERV-W expression in HIV-infected mothers was four-fold higher than the uninfected mothers from the control group (p < 0.01). HERV-W was down regulated in HIV-exposed babies in comparison to non-exposed babies. To our knowledge, this is the first report of HERV transcriptional activity in babies from 0-1 year-old.


Subject(s)
Endogenous Retroviruses/isolation & purification , HIV Infections/transmission , HIV Infections/virology , HIV-1/isolation & purification , Infant, Newborn, Diseases/virology , Adult , Endogenous Retroviruses/classification , Endogenous Retroviruses/genetics , Female , HIV-1/classification , HIV-1/genetics , Humans , Infant , Infant, Newborn , Infectious Disease Transmission, Vertical , Male , Transcription, Genetic
3.
Genet Mol Res ; 15(4)2016 Dec 19.
Article in English | MEDLINE | ID: mdl-28002598

ABSTRACT

Cambuci (Campomanesia phaea) belongs to the Myrtaceae family and is native to the Atlantic Forest of Brazil. It has ecological and social appeal but is exposed to problems associated with environmental degradation and expansion of agricultural activities in the region. Comprehensive studies on this species are rare, making its conservation and genetic improvement difficult. Thus, it is important to develop research activities to understand the current situation of the species as well as to make recommendations for its conservation and use. This study was performed to characterize the cambuci accessions found in the germplasm bank of Coordenadoria de Assistência Técnica Integral using inter-simple sequence repeat markers, with the goal of understanding the plant's population structure. The results showed the existence of some level of genetic diversity among the cambuci accessions that could be exploited for the genetic improvement of the species. Principal coordinate analysis and discriminant analysis clustered the 80 accessions into three groups, whereas Bayesian model-based clustering analysis clustered them into two groups. The formation of two cluster groups and the high membership coefficients within the groups pointed out the importance of further collection to cover more areas and more genetic variability within the species. The study also showed the lack of conservation activities; therefore, more attention from the appropriate organizations is needed to plan and implement natural and ex situ conservation activities.


Subject(s)
DNA, Plant/genetics , Genetic Variation , Microsatellite Repeats , Myrtaceae/genetics , Bayes Theorem , Brazil , Cluster Analysis , Conservation of Natural Resources , Databases, Genetic , Endangered Species , Myrtaceae/classification , Principal Component Analysis
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