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1.
Hum Mol Genet ; 28(19): 3199-3210, 2019 10 01.
Article in English | MEDLINE | ID: mdl-31211843

ABSTRACT

Spinal muscular atrophy (SMA) is a neuromuscular disease caused by deletions or mutations in survival motor neuron 1 (SMN1). The molecular mechanisms underlying motor neuron degeneration in SMA remain elusive, as global cellular dysfunction obscures the identification and characterization of disease-relevant pathways and potential therapeutic targets. Recent reports have implicated microRNA (miRNA) dysregulation as a potential contributor to the pathological mechanism in SMA. To characterize miRNAs that are differentially regulated in SMA, we profiled miRNA levels in SMA induced pluripotent stem cell (iPSC)-derived motor neurons. From this array, miR-23a downregulation was identified selectively in SMA motor neurons, consistent with previous reports where miR-23a functioned in neuroprotective and muscle atrophy-antagonizing roles. Reintroduction of miR-23a expression in SMA patient iPSC-derived motor neurons protected against degeneration, suggesting a potential miR-23a-specific disease-modifying effect. To assess this activity in vivo, miR-23a was expressed using a self-complementary adeno-associated virus serotype 9 (scAAV9) viral vector in the Smn2B/- SMA mouse model. scAAV9-miR-23a significantly reduced the pathology in SMA mice, including increased motor neuron size, reduced neuromuscular junction pathology, increased muscle fiber area, and extended survival. These experiments demonstrate that miR-23a is a novel protective modifier of SMA, warranting further characterization of miRNA dysfunction in SMA.


Subject(s)
Genetic Vectors/administration & dosage , MicroRNAs/genetics , Muscular Atrophy, Spinal/therapy , Animals , Dependovirus/genetics , Disease Models, Animal , Down-Regulation , Humans , Induced Pluripotent Stem Cells/metabolism , Mice , MicroRNAs/metabolism , Motor Neurons/metabolism , Muscular Atrophy, Spinal/genetics , Severity of Illness Index , Survival of Motor Neuron 2 Protein/genetics
2.
Genetics ; 206(2): 587-602, 2017 06.
Article in English | MEDLINE | ID: mdl-28592498

ABSTRACT

The nutritional environments that organisms experience are inherently variable, requiring tight coordination of how resources are allocated to different functions relative to the total amount of resources available. A growing body of evidence supports the hypothesis that key endocrine pathways play a fundamental role in this coordination. In particular, the insulin/insulin-like growth factor signaling (IIS) and target of rapamycin (TOR) pathways have been implicated in nutrition-dependent changes in metabolism and nutrient allocation. However, little is known about the genetic basis of standing variation in IIS/TOR or how diet-dependent changes in expression in this pathway influence phenotypes related to resource allocation. To characterize natural genetic variation in the IIS/TOR pathway, we used >250 recombinant inbred lines (RILs) derived from a multiparental mapping population, the Drosophila Synthetic Population Resource, to map transcript-level QTL of genes encoding 52 core IIS/TOR components in three different nutritional environments [dietary restriction (DR), control (C), and high sugar (HS)]. Nearly all genes, 87%, were significantly differentially expressed between diets, though not always in ways predicted by loss-of-function mutants. We identified cis (i.e., local) expression QTL (eQTL) for six genes, all of which are significant in multiple nutrient environments. Further, we identified trans (i.e., distant) eQTL for two genes, specific to a single nutrient environment. Our results are consistent with many small changes in the IIS/TOR pathways. A discriminant function analysis for the C and DR treatments identified a pattern of gene expression associated with the diet treatment. Mapping the composite discriminant function scores revealed a significant global eQTL within the DR diet. A correlation between the discriminant function scores and the median life span (r = 0.46) provides evidence that gene expression changes in response to diet are associated with longevity in these RILs.


Subject(s)
Drosophila Proteins/genetics , Insulin-Like Growth Factor I/genetics , Insulin/genetics , Longevity/genetics , Quantitative Trait Loci/genetics , TOR Serine-Threonine Kinases/genetics , Animals , Diet , Drosophila Proteins/metabolism , Drosophila melanogaster/genetics , Gene Expression Regulation/genetics , Gene-Environment Interaction , Genetics, Population , Insulin/metabolism , Phenotype , Signal Transduction , TOR Serine-Threonine Kinases/metabolism
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