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1.
Faraday Discuss ; 228(0): 312-328, 2021 05 27.
Article in English | MEDLINE | ID: mdl-33565544

ABSTRACT

We discuss our recently reported femtosecond (fs) X-ray emission spectroscopy results on the ligand dissociation and recombination in nitrosylmyoglobin (MbNO) in the context of previous studies on ferrous haem proteins. We also present a preliminary account of femtosecond X-ray absorption studies on MbNO, pointing to the presence of more than one species formed upon photolysis.


Subject(s)
Heme , Ligands , Photolysis , Spectrum Analysis , X-Rays
2.
Nat Commun ; 11(1): 4145, 2020 08 18.
Article in English | MEDLINE | ID: mdl-32811825

ABSTRACT

In haemoglobin the change from the low-spin (LS) hexacoordinated haem to the high spin (HS, S = 2) pentacoordinated domed deoxy-myoglobin (deoxyMb) form upon ligand detachment from the haem and the reverse process upon ligand binding are what ultimately drives the respiratory function. Here we probe them in the case of Myoglobin-NO (MbNO) using element- and spin-sensitive femtosecond Fe Kα and Kß X-ray emission spectroscopy at an X-ray free-electron laser (FEL). We find that the change from the LS (S = 1/2) MbNO to the HS haem occurs in ~800 fs, and that it proceeds via an intermediate (S = 1) spin state. We also show that upon NO recombination, the return to the planar MbNO ground state is an electronic relaxation from HS to LS taking place in ~30 ps. Thus, the entire ligand dissociation-recombination cycle in MbNO is a spin cross-over followed by a reverse spin cross-over process.


Subject(s)
Heme/chemistry , Hemoglobins/chemistry , Myoglobin/chemistry , Heme/metabolism , Hemoglobins/metabolism , Kinetics , Ligands , Models, Molecular , Myoglobin/metabolism , Spectrometry, X-Ray Emission
3.
Struct Dyn ; 4(4): 044033, 2017 Jul.
Article in English | MEDLINE | ID: mdl-28713842

ABSTRACT

The charge-carrier dynamics of anatase TiO2 nanoparticles in an aqueous solution were studied by femtosecond time-resolved X-ray absorption spectroscopy using an X-ray free electron laser in combination with a synchronized ultraviolet femtosecond laser (268 nm). Using an arrival time monitor for the X-ray pulses, we obtained a temporal resolution of 170 fs. The transient X-ray absorption spectra revealed an ultrafast Ti K-edge shift and a subsequent growth of a pre-edge structure. The edge shift occurred in ca. 100 fs and is ascribed to reduction of Ti by localization of generated conduction band electrons into shallow traps of self-trapped polarons or deep traps at penta-coordinate Ti sites. Growth of the pre-edge feature and reduction of the above-edge peak intensity occur with similar time constants of 300-400 fs, which we assign to the structural distortion dynamics near the surface.

4.
Sci Rep ; 5: 13868, 2015 Sep 10.
Article in English | MEDLINE | ID: mdl-26353981

ABSTRACT

Distributions of small molecular weight (less than 300 Da) compounds inside biological tissue have been obscure because of the lack of appropriate methods to measure them. Although fluorescence techniques are widely used to characterise the localisation of large biomolecules, they cannot be easily applied to the cases with small molecule compounds. We used CARS spectroscopy to detect and identify a label-free small molecule compound. To facilitate detection in aqueous environment, we utilised time-resolved and phase-sensitive techniques to reduce non-resonant background generated from water. We applied this technique to detect small molecular weight compound, taurine, inside mouse cornea tissue immersed in taurine solution as an initial model experiment. We detected a Raman peak of taurine near wavenumber 1033 cm(-1) inside cornea and successfully characterised its depth profile in the tissue. Our CARS spectra measurement can be a promising method to measure and visualise the distribution of small bio-related compounds in biological background without using any labeling, paving the way for new cell biological analysis in various disciplines.


Subject(s)
Spectrum Analysis, Raman , Tissue Distribution , Animals , Aqueous Humor/metabolism , Cornea/metabolism , Mice , Molecular Weight , Spectroscopy, Fourier Transform Infrared , Spectrum Analysis, Raman/methods , Taurine/metabolism , Time Factors
5.
Opt Express ; 22(1): 1105-13, 2014 Jan 13.
Article in English | MEDLINE | ID: mdl-24515070

ABSTRACT

We present femtosecond time-resolved X-ray absorption spectroscopy of aqueous solution using a hard x-ray free electron laser (SACLA) and a synchronized Ti:sapphire laser. The instrumental response time is 200 fs, and the repetition rate of measurement is 10 Hz. A cylindrical liquid beam 100 µm in diameter of aqueous ammonium iron(III) oxalate solution is photoexcited at 400 nm, and the transient X-ray absorption spectra are measured in the K-edge region of iron, 7.10 - 7.26 keV, using a dual X-ray beam dispersive detection method. Each of the dual beams has the pulse energy of 1.4 µJ, and pump-induced absorbance change on the order of 10(-3) is successfully detected. The photoexcited iron complex exhibits a red shifted iron K-edge with the appearance time constant of 260 fs. The X-ray absorption difference spectra, with and without the pump pulses, are independent of time delay after 1.5 ps up to 100 ps, indicating that the photoexcited species is long-lived.


Subject(s)
Lasers , Solutions/analysis , Solutions/chemistry , Spectrometry, X-Ray Emission/instrumentation , Spectrometry, X-Ray Emission/methods , Equipment Design , Equipment Failure Analysis , Radiation Dosage , Solutions/radiation effects
6.
Int J Mol Sci ; 13(5): 5851-5865, 2012.
Article in English | MEDLINE | ID: mdl-22754336

ABSTRACT

The results of room-temperature fluorescence lifetime measurements are reported for the excitation of J aggregates (Js) of pseudoisocyanine chloride (PIC-Cl) prepared in potassium polyvinyl sulfate (PVS) polymer thin films, their aqueous solutions, and NaCl aqueous solutions. Variations of the microscopic morphologies of the aggregates were investigated. The results show that fluorescence decay features correlated to the morphology change. The observed fluorescence lifetime and quantum efficiency of PIC J aggregates (PIC-Js) in a NaCl aqueous solution were 310 ps and 28%, respectively. The lifetime of the fibril-shaped macroaggregates prepared in PVS thin films was below the instrumental time resolution of 5 ps, and the efficiency decreased to below 3%. The results indicate that PIC-Js prepared with PVS polymers have an increased nonradiative contribution to the excitation deactivation process. In particular, macro-Js with isolated fibril-shaped structures revealed nonradiative pathway(s) that are closely associated to the specific packaging morphology of the constituent meso-Js. The possibility of a destructive effect on the formation of cavity-polaritons is also discussed.


Subject(s)
Quinolines/chemistry , Fluorescence , Polyvinyls/chemistry , Spectrometry, Fluorescence , Temperature
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