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1.
Gene ; 878: 147543, 2023 Aug 20.
Article in English | MEDLINE | ID: mdl-37331490

ABSTRACT

BACKGROUND: RND-type multidrug efflux systems in Gram-negative bacteria protect them against antimicrobial agents. Gram-negative bacteria generally possess several genes which encode such efflux pumps, but these pumps sometimes fail to show expression. Generally, some multidrug efflux pumps are silent or expressed only at low levels. However, genome mutations often increase the expression of such genes, conferring the bacteria with multidrug-resistant phenotypes. We previously reported mutants with increased expression of the multidrug efflux pump KexD. We aimed to identify the cause of KexD overexpression in our isolates. Furthermore, we also examined the colistin resistant levels in our mutants. METHODS: A transposon (Tn) was inserted into the genome of Klebsiella pneumoniae Em16-1, a KexD-overexpressing mutant, to identify the gene(s) responsible for KexD overexpression. RESULTS: Thirty-two strains with decreased kexD expression after Tn insertion were isolated. In 12 of these 32 strains, Tn was identified in crrB, which encodes a sensor kinase of a two-component regulatory system. DNA sequencing of crrB in Em16-1 showed that the 452nd cytosine on crrB was replaced by thymine, and this mutation changed the 151st proline into leucine. The same mutation was found in all other KexD-overexpressing mutants. The expression of crrA increased in the mutant overexpressing kexD, and the strains in which crrA was complemented by a plasmid showed elevated expression of kexD and crrB from the genome. The complementation of the mutant-type crrB also increased the expression of kexD and crrA from the genome, but the complementation of the wild-type crrB did not. Deletion of crrB decreased antibiotic resistance levels and KexD expression. CrrB was reported as a factor of colistin resistance, and the colistin resistance of our strains was tested. However, our mutants and strains carrying kexD on a plasmid did not show increased colistin resistance. CONCLUSION: Mutation in crrB is important for KexD overexpression. Increased CrrA may also be associated with KexD overexpression.


Subject(s)
Anti-Bacterial Agents , Colistin , Colistin/metabolism , Anti-Bacterial Agents/pharmacology , Anti-Bacterial Agents/metabolism , Bacterial Proteins/genetics , Bacterial Proteins/metabolism , Klebsiella pneumoniae/genetics , Mutation , Microbial Sensitivity Tests , Drug Resistance, Multiple, Bacterial/genetics
2.
Sci Rep ; 13(1): 8826, 2023 05 31.
Article in English | MEDLINE | ID: mdl-37258635

ABSTRACT

Multidrug-resistant Pseudomonas aeruginosa (MDRP) is one of the most important pathogens in clinical practice. To clarify the mechanisms contributing to its emergence, we isolated MDRPs using the P. aeruginosa PAO1, the whole genome sequence of which has already been elucidated. Mutant strains resistant to carbapenems, aminoglycosides, and new quinolones, which are used to treat P. aeruginosa infections, were isolated; however, none met the criteria for MDRPs. Then, PAO1 strains were exposed to these antimicrobial agents in various orders and the appearance rate of MDRP varied depending on the order of exposure; MDRPs more frequently appeared when gentamicin was applied before ciprofloxacin, but were rarely isolated when ciprofloxacin was applied first. Exposure to ciprofloxacin followed by gentamicin increased the expression of MexCD-OprJ, an RND-type multidrug efflux pump, due to the NfxB mutation. In contrast, exposure to gentamicin followed by ciprofloxacin resulted in more mutations in DNA gyrase. These results suggest that the type of quinolone resistance mechanism is related to the frequency of MDRP and that the risk of MDRP incidence is highly dependent on the order of exposure to gentamicin and ciprofloxacin.


Subject(s)
Membrane Transport Proteins , Pseudomonas aeruginosa , Membrane Transport Proteins/metabolism , Incidence , Anti-Bacterial Agents/pharmacology , Anti-Bacterial Agents/metabolism , Ciprofloxacin/pharmacology , Ciprofloxacin/metabolism , Gentamicins/pharmacology , Gentamicins/metabolism , Microbial Sensitivity Tests
3.
Sci Rep ; 10(1): 10876, 2020 07 02.
Article in English | MEDLINE | ID: mdl-32616840

ABSTRACT

The emergence of multidrug-resistant Klebsiella pneumoniae is a worldwide problem. K. pneumoniae possesses numerous resistant genes in its genome. We isolated mutants resistant to various antimicrobials in vitro and investigated the importance of intrinsic genes in acquired resistance. The isolation frequency of the mutants was 10-7-10-9. Of the multidrug-resistant mutants, hyper-multidrug-resistant mutants (EB256-1, EB256-2, Nov1-8, Nov2-2, and OX128) were identified, and accelerated efflux activity of ethidium from the inside to the outside of the cells was observed in these mutants. Therefore, we hypothesized that the multidrug efflux pump, especially RND-type efflux pump, would be related to changes of the phenotype. We cloned all RND-type multidrug efflux pumps from the K. pneumoniae genome and characterized them. KexEF and KexC were powerful multidrug efflux pumps, in addition to AcrAB, KexD, OqxAB, and EefABC, which were reported previously. It was revealed that the expression of eefA was increased in EB256-1 and EB256-2: the expression of oqxA was increased in OX128; the expression of kexF was increased in Nov2-2. It was found that a region of 1,485 bp upstream of kexF, was deleted in the genome of Nov2-2. K. pneumoniae possesses more potent RND-multidrug efflux systems than E. coli. However, we revealed that most of them did not contribute to the drug resistance of our strain at basic levels of expression. On the other hand, it was also noted that the overexpression of these pumps could lead to multidrug resistance based on exposure to antimicrobial chemicals. We conclude that these pumps may have a role to maintain the intrinsic resistance of K. pneumoniae when they are overexpressed. The antimicrobial chemicals selected many resistant mutants at the same minimum inhibitory concentration (MIC) or a concentration slightly higher than the MIC. These results support the importance of using antibiotics at appropriate concentrations at clinical sites.


Subject(s)
Anti-Bacterial Agents/pharmacology , Bacterial Proteins/metabolism , Drug Resistance, Multiple, Bacterial , Gene Expression Regulation, Bacterial/drug effects , Klebsiella Infections/drug therapy , Klebsiella pneumoniae/physiology , Bacterial Proteins/genetics , Biological Transport , Humans , Klebsiella Infections/metabolism , Klebsiella Infections/microbiology , Klebsiella pneumoniae/drug effects , Klebsiella pneumoniae/isolation & purification
4.
Sci Rep ; 9(1): 4854, 2019 03 19.
Article in English | MEDLINE | ID: mdl-30890721

ABSTRACT

We investigated the role of the resistance-nodulation-cell division superfamily (RND) efflux system on intrinsic multidrug resistance in Serratia marcescens. We identified eight putative RND efflux system genes in the S. marcescens Db10 genome that included the previously characterized systems, sdeXY, sdeAB, and sdeCDE. Six out of the eight genes conferred multidrug resistance on KAM32, a drug hypersensitive strain of Escherichia coli. Five out of the eight genes conferred resistance to benzalkonium, suggesting the importance of RND efflux systems in biocide resistance in S. marcescens. The energy-dependent efflux activities of five of the pumps were examined using a rhodamine 6 G efflux assay. When expressed in the tolC-deficient strain of E. coli, KAM43, none of the genes conferred resistance on E. coli. When hasF, encoding the S. marcescens TolC ortholog, was expressed in KAM43, all of the genes conferred resistance on E. coli, suggesting that HasF is a major outer membrane protein that is used by all RND efflux systems in this organism. We constructed a sdeXY deletion mutant from a derivative strain of the clinically isolated multidrug-resistant S. marcescens strain and found that the sdeXY deletion mutant was sensitive to a broad spectrum of antimicrobial agents.


Subject(s)
Drug Resistance, Multiple, Bacterial/genetics , Escherichia coli/genetics , Serratia Infections/genetics , Serratia marcescens/drug effects , Anti-Bacterial Agents/pharmacology , Bacterial Outer Membrane Proteins/genetics , Benzalkonium Compounds/pharmacology , Cell Division/drug effects , Escherichia coli/drug effects , Genome, Bacterial/drug effects , Genome, Bacterial/genetics , Humans , Microbial Sensitivity Tests , Multidrug Resistance-Associated Proteins , Serratia Infections/drug therapy , Serratia Infections/microbiology , Serratia marcescens/genetics , Serratia marcescens/pathogenicity
5.
FASEB Bioadv ; 1(3): 137-150, 2019 Mar.
Article in English | MEDLINE | ID: mdl-32123826

ABSTRACT

Alpha-1-acid glycoprotein (AGP) is a major acute-phase protein. Biosynthesis of AGP increases markedly during inflammation and infection, similar to nitric oxide (NO) biosynthesis. AGP variant A (AGP) contains a reduced cysteine (Cys149). Previously, we reported that S-nitrosated AGP (SNO-AGP) synthesized by reaction with a NO donor, possessed very strong broad-spectrum antimicrobial activity (IC50 = 10-9-10-6 M). In this study, using a cecal ligation and puncture animal model, we confirmed that AGP can be endogenously S-nitrosated during infection. Furthermore, we examined the antibacterial property of SNO-AGP against multidrug-resistant Klebsiella pneumoniae and Pseudomonas aeruginosa to investigate the involvement of SNO-AGP in the host defense system. Our results showed that SNO-AGP could inhibit multidrug efflux pump, AcrAB-TolC, a major contributor to bacterial multidrug resistance. In addition, SNO-AGP decreased biofilm formation and ATP level in bacteria, indicating that SNO-AGP can revert drug resistance. It was also noteworthy that SNO-AGP showed synergistic effects with the existing antibiotics (oxacillin, imipenem, norfloxacin, erythromycin, and tetracycline). In conclusion, SNO-AGP participated in the host defense system and has potential as a novel agent for single or combination antimicrobial therapy.

6.
Yakugaku Zasshi ; 137(4): 383-388, 2017.
Article in Japanese | MEDLINE | ID: mdl-28381710

ABSTRACT

Drug-resistant bacteria including methicillin-resistant Staphylococcus aureus (MRSA), multidrug-resistant Pseudomonas aeruginosa, and vancomycin-resistant enterococci (VRE) have been spreading; however, the development of new antibacterial drugs has not progressed accordingly. Novel antibacterial drugs or their candidate seeds need to be developed for effective antibiotic therapy. Under these conditions, the search for novel compounds and novel targets is important. In Okayama University, as a part of the Drug Discovery for Intractable Infectious Diseases project, we are proceeding with the development of antibacterial drugs for the treatment of drug-resistant bacterial infections. We found that riccardin C (a natural product of liverwort) and 6,6'-dihydroxythiobinupharidine (from the crude drug Senkotsu) exhibited strong antibacterial activities, particularly against Gram-positive bacteria. We showed that riccardin C induced cell membrane leakage and that 6,6'-dihydroxythiobinupharidine inhibited DNA topoisomerase IV. Moreover, 6,6'-dihydroxythiobinupharidine exerted synergistic effects with already known anti-MRSA drugs as well as with vancomycin for VRE.


Subject(s)
Alkaloids , Anti-Bacterial Agents , Drug Discovery , Drug Resistance, Multiple, Bacterial , Ethers, Cyclic , Alkaloids/pharmacology , Anti-Bacterial Agents/pharmacology , Biological Products , Cell Membrane/metabolism , DNA Topoisomerase IV/antagonists & inhibitors , Ethers, Cyclic/pharmacology , Hepatophyta , Japan , Methicillin-Resistant Staphylococcus aureus/drug effects , Vancomycin-Resistant Enterococci/drug effects
7.
Biochim Biophys Acta ; 1848(10 Pt A): 2057-64, 2015 Oct.
Article in English | MEDLINE | ID: mdl-26003535

ABSTRACT

Methicillin-resistant Staphylococcus aureus (MRSA) is a major problem in clinical settings, and because it is resistant to most antimicrobial agents, MRSA infections are difficult to treat. We previously reported that synthetic macrocyclic bis(bibenzyl) derivatives, which were originally discovered in liverworts, had anti-MRSA activity. However, the action mechanism responsible was unclear. In the present study, we elucidated the action mechanism of macrocyclic bis(bibenzyl) RC-112 and its partial structure, IDPO-9 (2-phenoxyphenol). Survival experiments demonstrated that RC-112 had a bactericidal effect on MRSA, whereas IDPO-9 had bacteriostatic effects. IDPO-9-resistant mutants exhibited cross-resistance to triclosan, but not to RC-112. The mutation was identified in the fabI, enoyl-acyl carrier protein reductase gene, a target of triclosan. We have not yet isolated the RC-112-resistant mutant. On the other hand, the addition of RC-112, unlike IDPO-9, caused the inflow of ethidium and propidium into S. aureus cells. RC-112-dependent ethidium outflow was observed in ethidium-loaded S. aureus cells. Transmission electron microscopy also revealed that S. aureus cells treated with RC-112 had intracellular lamellar mesosomal-like structures. Intracellular Na+ and K+ concentrations were significantly changed by the RC-112 treatment. These results indicated that RC-112 increased membrane permeability to ethidium, propidium, Na+, and K+, and also that the action mechanism of IDPO-9 was different from those of the other compounds.


Subject(s)
Cell Membrane Permeability/drug effects , Cell Survival/drug effects , Ethers, Cyclic/administration & dosage , Methicillin-Resistant Staphylococcus aureus/physiology , Cell Membrane Permeability/physiology , Cell Survival/physiology , Ethers, Cyclic/chemistry , Methicillin-Resistant Staphylococcus aureus/drug effects
8.
PLoS One ; 10(3): e0121619, 2015.
Article in English | MEDLINE | ID: mdl-25807080

ABSTRACT

We previously described the cloning of genes related to drug resistance from Klebsiella pneumoniae MGH78578. Of these, we identified a putative gene encoding a MATE-type multidrug efflux pump, and named it ketM. Escherichia coli KAM32 possessing ketM on a plasmid showed increased minimum inhibitory concentrations for norfloxacin, ciprofloxacin, cefotaxime, acriflavine, Hoechst 33342, and 4',6-diamidino-2-phenyl indole (DAPI). The active efflux of DAPI was observed in E. coli KAM32 possessing ketM on a plasmid. The expression of mRNA for ketM was observed in K. pneumoniae cells, and we subsequently disrupted ketM in K. pneumoniae ATCC10031. However, no significant changes were observed in drug resistance levels between the parental strain ATCC10031 and ketM disruptant, SKYM. Therefore, we concluded that KetM was a multidrug efflux pump, that did not significantly contribute to intrinsic resistance to antimicrobial chemicals in K. pneumoniae. MATE-type transporters are considered to be secondary transporters; therefore, we investigated the coupling cations of KetM. DAPI efflux by KetM was observed when lactate was added to produce a proton motive force, indicating that KetM effluxed substrates using a proton motive force. However, the weak efflux of DAPI by KetM was also noted when NaCl was added to the assay mixture without lactate. This result suggests that KetM may utilize proton and sodium motive forces.


Subject(s)
Bacterial Proteins/genetics , Drug Resistance, Multiple, Bacterial/genetics , Klebsiella pneumoniae/genetics , Membrane Transport Proteins/genetics , Amino Acid Sequence , Anti-Bacterial Agents/pharmacology , Cloning, Molecular/methods , Escherichia coli/drug effects , Escherichia coli/genetics , Microbial Sensitivity Tests/methods , Molecular Sequence Data , Plasmids/genetics , Proton-Motive Force/genetics , RNA, Messenger/genetics , Sequence Alignment
9.
Biochim Biophys Acta ; 1850(6): 1245-52, 2015 Jun.
Article in English | MEDLINE | ID: mdl-25731981

ABSTRACT

BACKGROUND: Multidrug-resistant bacteria, such as methicillin-resistant Staphylococcus aureus (MRSA) and vancomycin resistant enterococci (VRE), cause serious infections at clinical sites, for which the development of new drugs is necessary. We screened candidates for new antibiotics and investigated its action mechanism. METHODS: An antimicrobial compound was isolated from an extract of Nuphar japonicum. Its chemical structure was determined by NMR, MS, and optical rotation. We measured its minimum inhibitory concentration (MIC) using the microdilution method. The effects of the compound on DNA gyrase and DNA topoisomerase IV were investigated with DNA supercoiling, decatenation, and cleavage assay. RESULTS: We isolated and identified 6,6'-dihydroxythiobinupharidine as the antimicrobial compound. The MIC of this compound was 1-4 µg/mL against various MRSA and VRE strains. We also demonstrated that this compound inhibited DNA topoisomerase IV (IC50 was 10-15 µM), but not DNA gyrase in S. aureus, both of which are known to be the targets of quinolone antibiotics and necessary for DNA replication. However, this compound only exhibited slight cross-resistance to norfloxacin-resistant S. aureus, which indicated that DTBN might inhibit other targets besides topoisomerase IV. These results suggest that 6,6'-dihydroxythiobinupharidine may be a potent candidate or seed for novel antibacterial agents. CONCLUSIONS: DTBN from N. japonicum showed anti-MRSA and anti-VRE activities. DTBN might be involved in the inhibition of DNA topoisomerase IV. GENERAL SIGNIFICANCE: DTBN might be useful as a seed compound. The information on the inhibition mechanism of DTBN will be useful for the modification of DTBN towards developing novel anti-MRSA and anti-VRE drug.


Subject(s)
Alkaloids/pharmacology , Anti-Bacterial Agents/pharmacology , Drug Resistance, Multiple, Bacterial , Enterococcus/drug effects , Methicillin-Resistant Staphylococcus aureus/drug effects , Nuphar , Plant Extracts/pharmacology , Vancomycin Resistance , Alkaloids/chemistry , Alkaloids/isolation & purification , Anti-Bacterial Agents/chemistry , Anti-Bacterial Agents/isolation & purification , DNA Topoisomerase IV/antagonists & inhibitors , DNA Topoisomerase IV/metabolism , Dose-Response Relationship, Drug , Enterococcus/enzymology , Methicillin-Resistant Staphylococcus aureus/enzymology , Methicillin-Resistant Staphylococcus aureus/genetics , Microbial Sensitivity Tests , Molecular Structure , Nuphar/chemistry , Phytotherapy , Plant Extracts/chemistry , Plant Extracts/isolation & purification , Plants, Medicinal , Rhizome , Time Factors , Topoisomerase II Inhibitors/pharmacology
10.
Gene ; 541(1): 19-25, 2014 May 10.
Article in English | MEDLINE | ID: mdl-24613752

ABSTRACT

We isolated deoxycholate-resistant mutants from Vibrio parahaemolyticus RTM34, which lacks four multidrug efflux transporters belonging to the resistance nodulation cell division (RND) family. RTM34 showed sensitivity to many antimicrobial agents such as cholate and deoxycholate. Deoxycholate-resistant mutants from RTM34 have elevated resistance to not only deoxycholate, but also antibiotics, disinfectants, and dyes. RT-PCR analysis revealed that the expression of vmeV, which encodes an RND-type multidrug efflux transporter, was higher in deoxycholate-resistant mutants than in parental strain RTM34. VPA0806, designated as vdeR, was located upstream of the vmeTUV operon, was oriented in the opposite direction of this operon, and encoded a putative TetR family transcriptional regulator. We determined the nucleotide sequences of vdeR and the vmeT promoter region in the genomes of deoxycholate-resistant mutants. A point mutation was identified in vdeR of seven deoxycholate-resistant mutants and a deletion mutation was identified in vdeR of one deoxycholate-resistant mutant. Since most mutations cause a frame shift mutation and premature stop codon, the function of VdeR is thought to be lost in these mutants. Taken together, the results of the present study indicate that deoxycholate resistance in these mutants was due to the overexpression of vmeTUV caused by a loss in the repression by VdeR.


Subject(s)
Bacterial Proteins/metabolism , Bile Acids and Salts/chemistry , Deoxycholic Acid/chemistry , Drug Resistance, Multiple, Bacterial , Mutation , Vibrio parahaemolyticus/genetics , Amino Acid Sequence , Anti-Infective Agents/pharmacology , Bacterial Proteins/genetics , Base Sequence , Binding Sites , Codon , Gene Deletion , Genomic Islands , Microbial Sensitivity Tests , Molecular Sequence Data , Operon , Plasmids/metabolism , Point Mutation , Recombination, Genetic , Reverse Transcriptase Polymerase Chain Reaction , Time Factors , Vibrio parahaemolyticus/drug effects , Vibrio parahaemolyticus/metabolism
11.
Gene ; 534(2): 313-9, 2014 Jan 25.
Article in English | MEDLINE | ID: mdl-24498649

ABSTRACT

We previously reported that Klebsiella pneumoniae MGH78578 exhibited higher resistance against various antimicrobials than K. pneumoniae ATCC10031. In this study, we showed that the plasmid, pKPN5, in K. pneumoniae MGH78578 played an important role in resistance against aminoglycosides, ampicillin, tetracycline, and chloramphenicol, while genome-derived ß-lactamases and drug efflux pumps appeared to be more important in resistance to cloxacillin. acrAB, encoding a potent multidrug efflux pump, was cloned from K. pneumoniae MGH78578 and ATCC10031, to investigate reasons for the high drug resistance of K. pneumoniae MGH78578, and the results revealed that AcrAB from K. pneumoniae ATCC10031 conferred weaker drug resistance than AcrAB from K. pneumoniae MGH78578. DNA sequencing revealed that acrB from K. pneumoniae ATCC10031 carried the nonsense mutation, UGA, which was not found in acrB from K. pneumoniae MGH78578. However, acrB from K. pneumoniae ATCC10031 conferred slightly elevated resistant levels to several antimicrobials. The intact length of AcrB was detected in K. pneumoniae ATCC10031 by Western blot analysis, even though its quantity was small. Therefore, the stop codon UGA in acrB was thought to be overcome to some extent in this strain. We artificially introduced the nonsense mutation,UGA to the cat gene on pACYC184, and the plasmid also elevated the MIC of chloramphenicol in K. pneumoniae ATCC10031. These results suggest that a mechanism to overcome the nonsense mutation in acrB sustained resistance against a few ß-lactams, dyes, and cholic acid in K. pneumoniae ATCC10031.


Subject(s)
Bacterial Proteins/genetics , Codon, Terminator , Genes, MDR/genetics , Klebsiella pneumoniae/drug effects , Klebsiella pneumoniae/genetics , Multidrug Resistance-Associated Proteins/genetics , Anti-Bacterial Agents/pharmacology , Codon, Nonsense/genetics , Drug Resistance, Microbial , Klebsiella Infections/drug therapy , Klebsiella Infections/genetics , Sequence Analysis, DNA
12.
Microbiologyopen ; 2(5): 725-42, 2013 Oct.
Article in English | MEDLINE | ID: mdl-23894076

ABSTRACT

Resistance nodulation cell division (RND)-type efflux transporters play the main role in intrinsic resistance to various antimicrobial agents in many gram-negative bacteria. Here, we estimated 12 RND-type efflux transporter genes in Vibrio parahaemolyticus. Because VmeAB has already been characterized, we cloned the other 11 RND-type efflux transporter genes and characterized them in Escherichia coli KAM33 cells, a drug hypersusceptible strain. KAM33 expressing either VmeCD, VmeEF, or VmeYZ showed increased minimum inhibitory concentrations (MICs) for several antimicrobial agents. Additional four RND-type transporters were functional as efflux pumps only when co-expressed with VpoC, an outer membrane component in V. parahaemolyticus. Furthermore, VmeCD, VmeEF, and VmeYZ co-expressed with VpoC exhibited a broader substrate specificity and conferred higher resistance than that with TolC of E. coli. Deletion mutants of these transporter genes were constructed in V. parahaemolyticus. TM32 (ΔvmeAB and ΔvmeCD) had significantly decreased MICs for many antimicrobial agents and the number of viable cells after exposure to deoxycholate were markedly reduced. Strains in which 12 operons were all disrupted had very low MICs and much lower fluid accumulation in rabbit ileal loops. These results indicate that resistance nodulation cell division-type efflux transporters contribute not only to intrinsic resistance but also to exerting the virulence of V. parahaemolyticus.


Subject(s)
Bacterial Proteins/genetics , Multidrug Resistance-Associated Proteins/genetics , Phylogeny , Transgenes , Vibrio parahaemolyticus/genetics , Vibrio parahaemolyticus/pathogenicity , Animals , Anti-Bacterial Agents/pharmacology , Bacterial Outer Membrane Proteins/genetics , Bacterial Outer Membrane Proteins/metabolism , Bacterial Proteins/classification , Bacterial Proteins/metabolism , Escherichia coli/drug effects , Escherichia coli/genetics , Escherichia coli/metabolism , Escherichia coli Proteins/genetics , Escherichia coli Proteins/metabolism , Gene Deletion , Gene Expression , Membrane Transport Proteins/genetics , Membrane Transport Proteins/metabolism , Microbial Sensitivity Tests , Microbial Viability/drug effects , Multidrug Resistance-Associated Proteins/classification , Multidrug Resistance-Associated Proteins/metabolism , Operon , Rabbits , Vibrio Infections/drug therapy , Vibrio Infections/microbiology , Vibrio parahaemolyticus/drug effects , Vibrio parahaemolyticus/metabolism , Virulence
13.
PLoS One ; 8(3): e59525, 2013.
Article in English | MEDLINE | ID: mdl-23555691

ABSTRACT

Multidrug efflux pumps play an important role as a self-defense system in bacteria. Bacterial multidrug efflux pumps are classified into five families based on structure and coupling energy: resistance-nodulation-cell division (RND), small multidrug resistance (SMR), major facilitator (MF), ATP binding cassette (ABC), and multidrug and toxic compounds extrusion (MATE). We cloned a gene encoding a MATE-type multidrug efflux pump from Streptococcus pneumoniae R6, and designated it pdrM. PdrM showed sequence similarity with NorM from Vibrio parahaemolyticus, YdhE from Escherichia coli, and other bacterial MATE-type multidrug efflux pumps. Heterologous expression of PdrM let to elevated resistance to several antibacterial agents, norfloxacin, acriflavine, and 4',6-diamidino-2-phenylindole (DAPI) in E. coli KAM32 cells. PdrM effluxes acriflavine and DAPI in a Na(+)- or Li(+)-dependent manner. Moreover, Na(+) efflux via PdrM was observed when acriflavine was added to Na(+)-loaded cells expressing pdrM. Therefore, we conclude that PdrM is a Na(+)/drug antiporter in S. pneumoniae. In addition to pdrM, we found another two genes, spr1756 and spr1877,that met the criteria of MATE-type by searching the S. pneumoniae genome database. However, cloned spr1756 and spr1877 did not elevate the MIC of any of the investigated drugs. mRNA expression of spr1756, spr1877, and pdrM was detected in S. pneumoniae R6 under laboratory growth conditions. Therefore, spr1756 and spr1877 are supposed to play physiological roles in this growth condition, but they may be unrelated to drug resistance.


Subject(s)
Bacterial Proteins/genetics , Bacterial Proteins/metabolism , Genes, MDR/genetics , Sodium/metabolism , Streptococcus pneumoniae/genetics , Streptococcus pneumoniae/metabolism , Anti-Bacterial Agents/pharmacology , Cloning, Molecular , Microbial Sensitivity Tests , Plasmids/genetics , Sequence Analysis , Streptococcus pneumoniae/drug effects
14.
FASEB J ; 27(1): 391-8, 2013 Jan.
Article in English | MEDLINE | ID: mdl-23047897

ABSTRACT

Treating infections with exogenous NO, which shows broad-spectrum antimicrobial activity, appears to be effective. Similar to NO biosynthesis, biosynthesis of α-1-acid glycoprotein variant A (AGPa), with a reduced cysteine (Cys149), increases markedly during inflammation and infection. We hypothesized that AGPa is an S-nitrosation target in acute-phase proteins. This study aimed to determine whether S-nitrosated AGPa (SNO-AGPa) may be the first compound of this novel antibacterial class against multidrug-resistant bacteria. AGPa was incubated with RAW264.7 cells activated by lipopolysaccharide and interferon-γ. The antimicrobial effects of SNO-AGPa were determined by measuring the turbidity of the bacterial suspensions in vitro and survival in a murine sepsis model in vivo, respectively. Results indicated that endogenous NO generated by activated RAW264.7 cells caused S-nitrosation of AGPa at Cys149. SNO-AGPa strongly inhibited growth of gram-positive, gram-negative, and multidrug-resistant bacteria and was an extremely potent bacteriostatic compound (IC(50): 10(-9) to 10(-6) M). The antibacterial mechanism of SNO-AGPa involves S-transnitrosation from SNO-AGPa to bacterial cells. Treatment with SNO-AGPa, but not with AGPa, markedly reduced bacterial counts in blood and liver in a mouse sepsis model. The sialyl residues of AGPa seem to suppress the antibacterial activity, since SNO-asialo AGPa was more potent than SNO-AGPa.


Subject(s)
Bacteria/drug effects , Orosomucoid/pharmacology , Sepsis/physiopathology , Animals , Cell Line , Drug Resistance, Microbial , Mice , Nitrosation , Sepsis/microbiology , Survival Rate
15.
Gene ; 498(2): 177-82, 2012 May 01.
Article in English | MEDLINE | ID: mdl-22391093

ABSTRACT

We cloned a gene, kexD, that provides a multidrug-resistant phenotype from multidrug-resistant Klebsiella pneumoniae MGH78578. The deduced amino acid sequence of KexD is similar to that of the inner membrane protein, RND-type multidrug efflux pump. Introduction of the kexD gene into Escherichia coli KAM32 resulted in a MIC that was higher for erythromycin, novobiocin, rhodamine 6G, tetraphenylphosphonium chloride, and ethidium bromide than that of the control. Intracellular ethidium bromide levels in E. coli cells carrying the kexD gene were lower than that in the control cells under energized conditions, suggesting that KexD is a component of an energy-dependent efflux pump. RND-type pumps typically consist of three components: an inner membrane protein, a periplasmic protein, and an outer membrane protein. We discovered that KexD functions with a periplasmic protein, AcrA, from E. coli and K. pneumoniae, but not with the periplasmic proteins KexA and KexG from K. pneumoniae. KexD was able to utilize either TolC of E. coli or KocC of K. pneumoniae as an outer membrane component. kexD mRNA was not detected in K. pneumoniae MGH78578 or ATCC10031. We isolated erythromycin-resistant mutants from K. pneumoniae ATCC10031, and some showed a multidrug-resistant phenotype similar to the drug resistance pattern of KexD. Two strains of multidrug-resistant mutants were investigated for kexD expression; kexD mRNA levels were increased in these strains. We conclude that changing kexD expression can contribute to the occurrence of multidrug-resistant K. pneumoniae.


Subject(s)
Bacterial Proteins/genetics , Bacterial Proteins/metabolism , Drug Resistance, Multiple, Bacterial/genetics , Klebsiella pneumoniae/drug effects , Klebsiella pneumoniae/genetics , Bacterial Outer Membrane Proteins/genetics , Bacterial Outer Membrane Proteins/metabolism , Cloning, Molecular , Erythromycin/pharmacology , Escherichia coli/drug effects , Escherichia coli/genetics , Escherichia coli Proteins/genetics , Escherichia coli Proteins/metabolism , Ethidium/pharmacology , Gene Expression Regulation, Bacterial , Klebsiella pneumoniae/metabolism , Lipoproteins/metabolism , Membrane Transport Proteins/genetics , Membrane Transport Proteins/metabolism , Microbial Sensitivity Tests , Mutation , Novobiocin/pharmacology , Periplasmic Proteins/genetics , Periplasmic Proteins/metabolism , Rhodamines/pharmacology , Substrate Specificity
16.
J Med Chem ; 54(11): 3686-703, 2011 Jun 09.
Article in English | MEDLINE | ID: mdl-21534606

ABSTRACT

A structure-guided molecular design approach was used to optimize quercetin diacylglycoside analogues that inhibit bacterial DNA gyrase and topoisomerase IV and show potent antibacterial activity against a wide spectrum of relevant pathogens responsible for hospital- and community-acquired infections. In this paper, such novel 3,7-diacylquercetin, quercetin 6''-acylgalactoside, and quercetin 2'',6''-diacylgalactoside analogues of lead compound 1 were prepared to assess their target specificities and preferences in bacteria. The significant enzymatic inhibition of both Escherichia coli DNA gyrase and Staphylococcus aureus topoIV suggest that these compounds are dual inhibitors. Most of the investigated compounds exhibited pronounced inhibition with MIC values ranging from 0.13 to 128 µg/mL toward the growth of multidrug-resistant Gram-positive methicillin-resistant S. aureus, methicillin sensitive S. aureus, vancomycin-resistant enterococci (VRE), vancomycin intermediate S. aureus, and Streptococcus pneumoniae bacterial strains. Structure-activity relationship studies revealed that the acyl moiety was absolutely essential for activity against Gram-positive organisms. The most active compound 5i was 512-fold more potent than vancomycin and 16-32-fold more potent than 1 against VRE strains. It also has realistic in situ intestinal absorption in rats and showed very low acute toxicity in mice. So far, this compound can be regarded as a leading antibacterial agent.


Subject(s)
Anti-Bacterial Agents/pharmacology , DNA Topoisomerase IV/antagonists & inhibitors , Galactosides/pharmacology , Gram-Negative Bacteria/drug effects , Gram-Positive Bacteria/drug effects , Quercetin/analogs & derivatives , Topoisomerase II Inhibitors , Animals , Anti-Bacterial Agents/chemical synthesis , Anti-Bacterial Agents/chemistry , Anti-Bacterial Agents/toxicity , Drug Design , Enzyme Inhibitors/pharmacology , Galactosides/chemical synthesis , Galactosides/chemistry , Galactosides/toxicity , Male , Mice , Microbial Sensitivity Tests , Models, Molecular , Molecular Targeted Therapy , Quercetin/chemical synthesis , Quercetin/chemistry , Quercetin/pharmacology , Quercetin/toxicity , Rats , Rats, Wistar
17.
Bioorg Med Chem Lett ; 20(17): 5349-52, 2010 Sep 01.
Article in English | MEDLINE | ID: mdl-20655215

ABSTRACT

A series of novel quercetin diacylglucosides were designed and first synthesized by Steglich esterification on the basis of MRSA strains inhibiting natural compound A. The in vitro inhibition of different multi-drug resistant bacterial strains and Escherichia coli DNA gyrase B was investigated. In the series, compound 10h was up to 128-fold more potent against vancomycin-resistant enterococci and more effective than A, which represents a promising new candidate as a potent anti-MRSA and anti-VRE agent.


Subject(s)
Anti-Bacterial Agents/pharmacology , Enterococcus/drug effects , Glucosides/chemistry , Methicillin-Resistant Staphylococcus aureus/drug effects , Quercetin/pharmacology , Vancomycin/pharmacology , Drug Design , Microbial Sensitivity Tests , Quercetin/chemistry
18.
Microbiology (Reading) ; 155(Pt 11): 3509-3517, 2009 Nov.
Article in English | MEDLINE | ID: mdl-19713238

ABSTRACT

muxA-muxB-muxC-opmB (formerly PA2528-PA2527-PA2526-opmB), encoding a putative resistance nodulation cell division (RND)-type multidrug efflux pump system, was cloned from Pseudomonas aeruginosa PAO1. Introduction of muxABC-opmB into P. aeruginosa YM64, a drug-hypersusceptible strain, led to elevated MICs of aztreonam, macrolides, novobiocin and tetracycline. Since muxB and muxC, both of which encode RND components, were essential for function, MuxABC-OpmB is thought to be a drug efflux pump with four components. One novobiocin-resistant mutant, PMX725, isolated from P. aeruginosa PMX7 showed elevated resistance not only to novobiocin but also to aztreonam, macrolides and tetracycline. Increased mRNA expression of muxABC-opmB was observed in the mutant PMX725 compared with the parental strain. Sequencing analysis revealed that a single-nucleotide insertion had occurred in the deduced promoter region for muxABC-opmB in PMX725. In this study, we have characterized the last RND-type multidrug efflux pump predicted from the genome sequence in P. aeruginosa.


Subject(s)
Bacterial Outer Membrane Proteins/genetics , Drug Resistance, Multiple, Bacterial/genetics , Membrane Transport Proteins/genetics , Pseudomonas aeruginosa/genetics , Base Sequence , Cloning, Molecular , DNA, Bacterial/genetics , Genes, Bacterial , Microbial Sensitivity Tests , Molecular Sequence Data , Novobiocin/pharmacology , Plasmids , Promoter Regions, Genetic
19.
Biol Pharm Bull ; 32(3): 483-8, 2009 Mar.
Article in English | MEDLINE | ID: mdl-19252300

ABSTRACT

A DNA fragment responsible for resistance to antimicrobial agents was cloned from chromosomal DNA of Enterococcus faecium FN-1, a clinically isolated strain. Escherichia coli KAM32, a drug-hypersusceptible mutant, was used as a host for gene cloning. Cells of E. coli KAM32 harboring a recombinant plasmid (pTFM8) carrying the DNA fragment became resistant to fluoroquinolones, macrolides, ethidium bromide, 4',6-diamidino-2-phenylindole (DAPI) and tetraphenylphosphonium chloride (TPPCl). Three complete open reading frames (ORFs) were found in the DNA insert of pTFM8, and the deduced amino acid sequences of one of the ORFs showed high similarity to Mdt(A) from Lactococcus lactis. Mdt(A) is a multidrug efflux pump belonging to a major facilitator superfamily. We designated the ORF efmA. E. coli KAM32 cells harboring the efmA showed energy-dependent efflux of DAPI and TPP(+). We also observed norfloxacin/H(+) antiport due to EfmA. The mRNA expression of efmA was observed in E. faecium FN-1 grown without any exogenously added antimicrobial agents. Thus, we conclude that efmA is constitutively expressed under laboratory growth conditions and would contribute to intrinsic resistance against multiple antimicrobial agents in E. faecium FN-1.


Subject(s)
Antiporters/genetics , Bacterial Proteins/genetics , Drug Resistance, Multiple, Bacterial , Enterococcus faecium/metabolism , Anti-Bacterial Agents/pharmacology , Antiporters/biosynthesis , Bacterial Proteins/biosynthesis , Cloning, Molecular , Enterococcus faecium/drug effects , Enterococcus faecium/isolation & purification , Escherichia coli/drug effects , Escherichia coli/genetics , Escherichia coli/metabolism , Microbial Sensitivity Tests , Open Reading Frames
20.
Biol Pharm Bull ; 32(3): 489-92, 2009 Mar.
Article in English | MEDLINE | ID: mdl-19252301

ABSTRACT

In a previous study, we reported that two kaempferol glycosides isolated from Laurus nobilis L., kaempferol-3-O-alpha-L-(2'',4''-di-E-p-coumaroyl)-rhamnoside (C2) and kaempferol-3-O-alpha-L-(2''-E-p-coumaroyl-4''-Z-p-coumaroyl)-rhamnoside (C3), showed strong antibacterial activities against methicillin-resistant Staphylococcus aureus (MRSA) and vancomycin-resistant enterococci. Thereafter we found that these compounds greatly reduced the minimum inhibitory concentrations (MICs) of some fluoroquinolones in MRSA. In other words, C2 and C3 greatly potentiated anti-MRSA activity of fluoroquinolones. The effect of C2 and C3 with fluoroquinolones was found to be synergistic. The potentiation activity was observed with hydrophilic fluoroquinolones, such as norfloxacin and ciprofloxacin, but not with hydrophobic quinolones. We also found that norfloxacin reduced MICs of C2 and C3. The effect was synergistic. Possible mechanism of the synergistic effect was discussed.


Subject(s)
Anti-Bacterial Agents/pharmacology , Coumaric Acids/pharmacology , Fluoroquinolones/pharmacology , Glycosides/physiology , Kaempferols/pharmacology , Laurus/chemistry , Methicillin-Resistant Staphylococcus aureus/drug effects , Anti-Bacterial Agents/isolation & purification , Coumaric Acids/isolation & purification , Drug Synergism , Fluoroquinolones/isolation & purification , Glycosides/isolation & purification , Kaempferols/isolation & purification , Microbial Sensitivity Tests
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