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1.
Sci Rep ; 14(1): 15270, 2024 07 03.
Article in English | MEDLINE | ID: mdl-38961114

ABSTRACT

Alzheimer's disease (AD), the predominant form of dementia, is a growing global challenge, emphasizing the urgent need for accurate and early diagnosis. Current clinical diagnoses rely on radiologist expert interpretation, which is prone to human error. Deep learning has thus far shown promise for early AD diagnosis. However, existing methods often overlook focal structural atrophy critical for enhanced understanding of the cerebral cortex neurodegeneration. This paper proposes a deep learning framework that includes a novel structure-focused neurodegeneration CNN architecture named SNeurodCNN and an image brightness enhancement preprocessor using gamma correction. The SNeurodCNN architecture takes as input the focal structural atrophy features resulting from segmentation of brain structures captured through magnetic resonance imaging (MRI). As a result, the architecture considers only necessary CNN components, which comprises of two downsampling convolutional blocks and two fully connected layers, for achieving the desired classification task, and utilises regularisation techniques to regularise learnable parameters. Leveraging mid-sagittal and para-sagittal brain image viewpoints from the Alzheimer's disease neuroimaging initiative (ADNI) dataset, our framework demonstrated exceptional performance. The para-sagittal viewpoint achieved 97.8% accuracy, 97.0% specificity, and 98.5% sensitivity, while the mid-sagittal viewpoint offered deeper insights with 98.1% accuracy, 97.2% specificity, and 99.0% sensitivity. Model analysis revealed the ability of SNeurodCNN to capture the structural dynamics of mild cognitive impairment (MCI) and AD in the frontal lobe, occipital lobe, cerebellum, temporal, and parietal lobe, suggesting its potential as a brain structural change digi-biomarker for early AD diagnosis. This work can be reproduced using code we made available on GitHub.


Subject(s)
Alzheimer Disease , Deep Learning , Magnetic Resonance Imaging , Neural Networks, Computer , Alzheimer Disease/pathology , Alzheimer Disease/diagnostic imaging , Alzheimer Disease/diagnosis , Alzheimer Disease/classification , Humans , Magnetic Resonance Imaging/methods , Neuroimaging/methods , Brain/pathology , Brain/diagnostic imaging , Image Processing, Computer-Assisted/methods
2.
Comput Methods Programs Biomed ; 220: 106773, 2022 Jun.
Article in English | MEDLINE | ID: mdl-35429810

ABSTRACT

BACKGROUND AND OBJECTIVE: Diabetes mellitus is a metabolic disorder characterized by hyperglycemia, which results from the inadequacy of the body to secrete and respond to insulin. If not properly managed or diagnosed on time, diabetes can pose a risk to vital body organs such as the eyes, kidneys, nerves, heart, and blood vessels and so can be life-threatening. The many years of research in computational diagnosis of diabetes have pointed to machine learning to as a viable solution for the prediction of diabetes. However, the accuracy rate to date suggests that there is still much room for improvement. In this paper, we are proposing a machine learning framework for diabetes prediction and diagnosis using the PIMA Indian dataset and the laboratory of the Medical City Hospital (LMCH) diabetes dataset. We hypothesize that adopting feature selection and missing value imputation methods can scale up the performance of classification models in diabetes prediction and diagnosis. METHODS: In this paper, a robust framework for building a diabetes prediction model to aid in the clinical diagnosis of diabetes is proposed. The framework includes the adoption of Spearman correlation and polynomial regression for feature selection and missing value imputation, respectively, from a perspective that strengthens their performances. Further, different supervised machine learning models, the random forest (RF) model, support vector machine (SVM) model, and our designed twice-growth deep neural network (2GDNN) model are proposed for classification. The models are optimized by tuning the hyperparameters of the models using grid search and repeated stratified k-fold cross-validation and evaluated for their ability to scale to the prediction problem. RESULTS: Through experiments on the PIMA Indian and LMCH diabetes datasets, precision, sensitivity, F1-score, train-accuracy, and test-accuracy scores of 97.34%, 97.24%, 97.26%, 99.01%, 97.25 and 97.28%, 97.33%, 97.27%, 99.57%, 97.33, are achieved with the proposed 2GDNN model, respectively. CONCLUSION: The data preprocessing approaches and the classifiers with hyperparameter optimization proposed within the machine learning framework yield a robust machine learning model that outperforms state-of-the-art results in diabetes mellitus prediction and diagnosis. The source code for the models of the proposed machine learning framework has been made publicly available.


Subject(s)
Diabetes Mellitus , Potassium Iodide , Diabetes Mellitus/diagnosis , Humans , Machine Learning , Neural Networks, Computer , Support Vector Machine
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