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1.
Environ Health Perspect ; 126(2): 029002, 2018 02 20.
Article in English | MEDLINE | ID: mdl-29467110

ABSTRACT

[This corrects the article DOI: https://doi.org/10.1289/EHP507.].

2.
Environ Health Perspect ; 125(9): 097003, 2017 09 06.
Article in English | MEDLINE | ID: mdl-28934094

ABSTRACT

BACKGROUND: PM2.5 precursor emissions have declined over the course of several decades, following the implementation of local, state, and federal air quality policies. Estimating the corresponding change in population exposure and PM2.5-attributable risk of death prior to the year 2000 is made difficult by the lack of PM2.5 monitoring data. OBJECTIVES: We used a new technique to estimate historical PM2.5 concentrations, and estimated the effects of changes in PM2.5 population exposures on mortality in adults (age ≥30y), and on life expectancy at birth, in the contiguous United States during 1980-2010. METHODS: We estimated annual mean county-level PM2.5 concentrations in 1980, 1990, 2000, and 2010 using universal kriging incorporating geographic variables. County-level death rates and national life tables for each year were obtained from the U.S. Census and Centers for Disease Control and Prevention. We used log-linear and nonlinear concentration-response coefficients from previous studies to estimate changes in the numbers of deaths and in life years and life expectancy at birth, attributable to changes in PM2.5. RESULTS: Between 1980 and 2010, population-weighted PM2.5 exposures fell by about half, and the estimated number of excess deaths declined by about a third. The States of California, Virginia, New Jersey, and Georgia had some of the largest estimated reductions in PM2.5-attributable deaths. Relative to a counterfactual population with exposures held constant at 1980 levels, we estimated that people born in 2050 would experience an ∼1-y increase in life expectancy at birth, and that there would be a cumulative gain of 4.4 million life years among adults ≥30y of age. CONCLUSIONS: Our estimates suggest that declines in PM2.5 exposures between 1980 and 2010 have benefitted public health. https://doi.org/10.1289/EHP507.


Subject(s)
Air Pollution/statistics & numerical data , Environmental Exposure/statistics & numerical data , Life Expectancy/trends , Mortality/trends , Adult , Air Pollutants , Female , Humans , Male , Middle Aged , Risk Factors , United States/epidemiology
3.
Environ Health Perspect ; 125(1): 38-46, 2017 01.
Article in English | MEDLINE | ID: mdl-27340825

ABSTRACT

INTRODUCTION: Recent cohort studies have used exposure prediction models to estimate the association between long-term residential concentrations of fine particulate matter (PM2.5) and health. Because these prediction models rely on PM2.5 monitoring data, predictions for times before extensive spatial monitoring present a challenge to understanding long-term exposure effects. The U.S. Environmental Protection Agency (EPA) Federal Reference Method (FRM) network for PM2.5 was established in 1999. OBJECTIVES: We evaluated a novel statistical approach to produce high-quality exposure predictions from 1980 through 2010 in the continental United States for epidemiological applications. METHODS: We developed spatio-temporal prediction models using geographic predictors and annual average PM2.5 data from 1999 through 2010 from the FRM and the Interagency Monitoring of Protected Visual Environments (IMPROVE) networks. Temporal trends before 1999 were estimated by using a) extrapolation based on PM2.5 data in FRM/IMPROVE, b) PM2.5 sulfate data in the Clean Air Status and Trends Network, and c) visibility data across the Weather Bureau Army Navy network. We validated the models using PM2.5 data collected before 1999 from IMPROVE, California Air Resources Board dichotomous sampler monitoring (CARB dichot), the Children's Health Study (CHS), and the Inhalable Particulate Network (IPN). RESULTS: In our validation using pre-1999 data, the prediction model performed well across three trend estimation approaches when validated using IMPROVE and CHS data (R2 = 0.84-0.91) with lower R2 values in early years. Model performance using CARB dichot and IPN data was worse (R2 = 0.00-0.85) most likely because of fewer monitoring sites and inconsistent sampling methods. CONCLUSIONS: Our prediction modeling approach will allow health effects estimation associated with long-term exposures to PM2.5 over extended time periods ≤ 30 years. Citation: Kim SY, Olives C, Sheppard L, Sampson PD, Larson TV, Keller JP, Kaufman JD. 2017. Historical prediction modeling approach for estimating long-term concentrations of PM2.5 in cohort studies before the 1999 implementation of widespread monitoring. Environ Health Perspect 125:38-46; http://dx.doi.org/10.1289/EHP131.


Subject(s)
Air Pollutants/analysis , Air Pollution/statistics & numerical data , Environmental Exposure/statistics & numerical data , Particulate Matter/analysis , California , Cohort Studies , Environmental Monitoring , Humans , United States , United States Environmental Protection Agency , Weather
4.
Air Qual Atmos Health ; 9(8): 961-972, 2016.
Article in English | MEDLINE | ID: mdl-27867428

ABSTRACT

The effectiveness of regulatory actions designed to improve air quality is often assessed by predicting changes in public health resulting from their implementation. Risk of premature mortality from long-term exposure to ambient air pollution is the single most important contributor to such assessments and is estimated from observational studies generally assuming a log-linear, no-threshold association between ambient concentrations and death. There has been only limited assessment of this assumption in part because of a lack of methods to estimate the shape of the exposure-response function in very large study populations. In this paper, we propose a new class of variable coefficient risk functions capable of capturing a variety of potentially non-linear associations which are suitable for health impact assessment. We construct the class by defining transformations of concentration as the product of either a linear or log-linear function of concentration multiplied by a logistic weighting function. These risk functions can be estimated using hazard regression survival models with currently available computer software and can accommodate large population-based cohorts which are increasingly being used for this purpose. We illustrate our modeling approach with two large cohort studies of long-term concentrations of ambient air pollution and mortality: the American Cancer Society Cancer Prevention Study II (CPS II) cohort and the Canadian Census Health and Environment Cohort (CanCHEC). We then estimate the number of deaths attributable to changes in fine particulate matter concentrations over the 2000 to 2010 time period in both Canada and the USA using both linear and non-linear hazard function models.

5.
Lancet ; 388(10045): 696-704, 2016 Aug 13.
Article in English | MEDLINE | ID: mdl-27233746

ABSTRACT

BACKGROUND: Long-term exposure to fine particulate matter less than 2.5 µm in diameter (PM2.5) and traffic-related air pollutant concentrations are associated with cardiovascular risk. The disease process underlying these associations remains uncertain. We aim to assess association between long-term exposure to ambient air pollution and progression of coronary artery calcium and common carotid artery intima-media thickness. METHODS: In this prospective 10-year cohort study, we repeatedly measured coronary artery calcium by CT in 6795 participants aged 45-84 years enrolled in the Multi-Ethnic Study of Atherosclerosis and Air Pollution (MESA Air) in six metropolitan areas in the USA. Repeated scans were done for nearly all participants between 2002 and 2005, for a subset of participants between 2005 and 2007, and for half of all participants between 2010 and 2012. Common carotid artery intima-media thickness was measured by ultrasound in all participants at baseline and in 2010-12 for 3459 participants. Residence-specific spatio-temporal pollution concentration models, incorporating community-specific measurements, agency monitoring data, and geographical predictors, estimated concentrations of PM2.5 and nitrogen oxides (NOX) between 1999 and 2012. The primary aim was to examine the association between both progression of coronary artery calcium and mean carotid artery intima-media thickness and long-term exposure to ambient air pollutant concentrations (PM2.5, NOX, and black carbon) between examinations and within the six metropolitan areas, adjusting for baseline age, sex, ethnicity, socioeconomic characteristics, cardiovascular risk factors, site, and CT scanner technology. FINDINGS: In this population, coronary calcium increased on average by 24 Agatston units per year (SD 58), and intima-media thickness by 12 µm per year (10), before adjusting for risk factors or air pollutant exposures. Participant-specific pollutant concentrations averaged over the years 2000-10 ranged from 9.2-22.6 µg PM2.5/m(3) and 7.2-139.2 parts per billion (ppb) NOX. For each 5 µg PM2.5/m(3) increase, coronary calcium progressed by 4.1 Agatston units per year (95% CI 1.4-6.8) and for each 40 ppb NOX coronary calcium progressed by 4.8 Agatston units per year (0.9-8.7). Pollutant exposures were not associated with intima-media thickness change. The estimate for the effect of a 5 µg/m(3) higher long-term exposure to PM2.5 in intima-media thickness was -0.9 µm per year (95% CI -3.0 to 1.3). For 40 ppb higher NOX, the estimate was 0.2 µm per year (-1.9 to 2.4). INTERPRETATION: Increased concentrations of PM2.5 and traffic-related air pollution within metropolitan areas, in ranges commonly encountered worldwide, are associated with progression in coronary calcification, consistent with acceleration of atherosclerosis. This study supports the case for global efforts of pollution reduction in prevention of cardiovascular diseases. FUNDING: US Environmental Protection Agency and US National Institutes of Health.


Subject(s)
Air Pollution/adverse effects , Air Pollution/statistics & numerical data , Atherosclerosis/epidemiology , Calcinosis/epidemiology , Carotid Artery, Common/pathology , Coronary Disease/epidemiology , Coronary Vessels/pathology , Adult , Aged , Air Pollutants/analysis , Atherosclerosis/ethnology , Atherosclerosis/etiology , Calcinosis/ethnology , Calcinosis/etiology , Cardiovascular Diseases/epidemiology , Cardiovascular Diseases/prevention & control , Carotid Intima-Media Thickness , Carotid Stenosis/epidemiology , Carotid Stenosis/etiology , Coronary Disease/ethnology , Coronary Disease/etiology , Coronary Disease/pathology , Environmental Exposure/adverse effects , Female , Humans , Longitudinal Studies , Male , Middle Aged , Prospective Studies , Risk Factors , United States
6.
Environ Sci Technol ; 50(10): 5111-8, 2016 05 17.
Article in English | MEDLINE | ID: mdl-27074524

ABSTRACT

Assessments of long-term air pollution exposure in population studies have commonly employed land-use regression (LUR) or chemical transport modeling (CTM) techniques. Attempts to incorporate both approaches in one modeling framework are challenging. We present a novel geostatistical modeling framework, incorporating CTM predictions into a spatiotemporal LUR model with spatial smoothing to estimate spatiotemporal variability of ozone (O3) and particulate matter with diameter less than 2.5 µm (PM2.5) from 2000 to 2008 in the Los Angeles Basin. The observations include over 9 years' data from more than 20 routine monitoring sites and specific monitoring data at over 100 locations to provide more comprehensive spatial coverage of air pollutants. Our composite modeling approach outperforms separate CTM and LUR models in terms of root-mean-square error (RMSE) assessed by 10-fold cross-validation in both temporal and spatial dimensions, with larger improvement in the accuracy of predictions for O3 (RMSE [ppb] for CTM, 6.6; LUR, 4.6; composite, 3.6) than for PM2.5 (RMSE [µg/m(3)] CTM: 13.7, LUR: 3.2, composite: 3.1). Our study highlights the opportunity for future exposure assessment to make use of readily available spatiotemporal modeling methods and auxiliary gridded data that takes chemical reaction processes into account to improve the accuracy of predictions in a single spatiotemporal modeling framework.


Subject(s)
Air Pollutants/analysis , Ozone/analysis , Air Pollution/analysis , Environmental Monitoring/methods , Los Angeles , Models, Chemical , Models, Theoretical , Particulate Matter/analysis
7.
Am J Respir Crit Care Med ; 193(9): 1000-7, 2016 05 01.
Article in English | MEDLINE | ID: mdl-26599707

ABSTRACT

RATIONALE: Diesel exhaust inhalation, which is the model traffic-related air pollutant exposure, is associated with vascular dysfunction. OBJECTIVES: To determine whether healthy subjects exposed to diesel exhaust exhibit acute vasoconstriction and whether this effect could be modified by the use of antioxidants or by common variants in the angiotensin II type 1 receptor (AGTR1) and other candidate genes. METHODS: In a genotype-stratified, double-blind, four-way crossover study, 21 healthy adult subjects were exposed at rest in a randomized, balanced order to diesel exhaust (200 µg/m(3) particulate matter with an aerodynamic diameter ≤ 2.5 µm [PM2.5]) and filtered air, and to pretreatment with antioxidants (N-acetylcysteine and ascorbate) and placebo. Before and after each exposure, brachial artery diameter (BAd) was assessed using ultrasound. Changes in BAd were compared across pretreatment and exposure sessions. Gene-exposure interactions were evaluated in the AGTR1 A1166C polymorphism, on which recruitment was stratified, and other candidate genes, including TRPV1 and GSTM1. MEASUREMENTS AND MAIN RESULTS: Compared with filtered air, exposure to diesel exhaust resulted in a significant reduction in BAd (mean, -0.09 mm, 95% confidence interval [CI], -0.01 to -0.17; P = 0.03). Pretreatment with antioxidants augmented diesel exhaust-related vasoconstriction with a mean change in BAd of -0.18 mm (95% CI, -0.28 to -0.07 mm; P = 0.001). Diesel exhaust-related vasoconstriction was primarily observed in the variant alleles of AGTR1 and TRPV1. No association was found between diesel exhaust inhalation and flow-mediated dilation. CONCLUSIONS: We confirmed that short-term exposure to diesel exhaust in healthy subjects is associated with acute vasoconstriction in a conductance artery and found suggestive evidence of involvement of nociception and renin-angiotensin systems in this effect. Pretreatment with an antioxidant regimen increased vasoconstriction.


Subject(s)
Air Pollutants/pharmacology , Antioxidants/pharmacology , Brachial Artery/drug effects , Brachial Artery/physiopathology , Vasoconstriction/drug effects , Vehicle Emissions , Acetylcysteine/administration & dosage , Acetylcysteine/pharmacology , Adolescent , Adult , Antioxidants/administration & dosage , Ascorbic Acid/administration & dosage , Brachial Artery/diagnostic imaging , Cross-Over Studies , Double-Blind Method , Female , Humans , Inhalation Exposure , Male , Middle Aged , Ultrasonography , Young Adult
8.
J Am Heart Assoc ; 4(8): e001726, 2015 Aug 06.
Article in English | MEDLINE | ID: mdl-26251281

ABSTRACT

BACKGROUND: Coronary artery calcium (CAC) detected by noncontrast cardiac computed tomography scanning is a measure of coronary atherosclerosis burden. Increasing CAC levels have been strongly associated with increased coronary events. Prior studies of cardiovascular disease risk factors and CAC progression have been limited by short follow-up or restricted to patients with advanced disease. METHODS AND RESULTS: We examined cardiovascular disease risk factors and CAC progression in a prospective multiethnic cohort study. CAC was measured 1 to 4 times (mean 2.5 scans) over 10 years in 6810 adults without preexisting cardiovascular disease. Mean CAC progression was 23.9 Agatston units/year. An innovative application of mixed-effects models investigated associations between cardiovascular disease risk factors and CAC progression. This approach adjusted for time-varying factors, was flexible with respect to follow-up time and number of observations per participant, and allowed simultaneous control of factors associated with both baseline CAC and CAC progression. Models included age, sex, study site, scanner type, and race/ethnicity. Associations were observed between CAC progression and age (14.2 Agatston units/year per 10 years [95% CI 13.0 to 15.5]), male sex (17.8 Agatston units/year [95% CI 15.3 to 20.3]), hypertension (13.8 Agatston units/year [95% CI 11.2 to 16.5]), diabetes (31.3 Agatston units/year [95% CI 27.4 to 35.3]), and other factors. CONCLUSIONS: CAC progression analyzed over 10 years of follow-up, with a novel analytical approach, demonstrated strong relationships with risk factors for incident cardiovascular events. Longitudinal CAC progression analyzed in this framework can be used to evaluate novel cardiovascular risk factors.


Subject(s)
Coronary Artery Disease/ethnology , Ethnicity , Vascular Calcification/ethnology , Age Factors , Aged , Comorbidity , Coronary Angiography/methods , Coronary Artery Disease/diagnostic imaging , Disease Progression , Female , Humans , Male , Middle Aged , Prognosis , Prospective Studies , Risk Assessment , Risk Factors , Sex Factors , Time Factors , Tomography, X-Ray Computed , United States/epidemiology , Vascular Calcification/diagnostic imaging
9.
Atmos Environ (1994) ; 123(A): 79-87, 2015 Dec.
Article in English | MEDLINE | ID: mdl-27642250

ABSTRACT

BACKGROUND: Current epidemiologic studies rely on simple ozone metrics which may not appropriately capture population ozone exposure. For understanding health effects of long-term ozone exposure in population studies, it is advantageous for exposure estimation to incorporate the complex spatiotemporal pattern of ozone concentrations at fine scales. OBJECTIVE: To develop a geo-statistical exposure prediction model that predicts fine scale spatiotemporal variations of ambient ozone in six United States metropolitan regions. METHODS: We developed a modeling framework that estimates temporal trends from regulatory agency and cohort-specific monitoring data from MESA Air measurement campaigns and incorporates land use regression with universal kriging using predictor variables from a large geographic database. The cohort-specific data were measured at home and community locations. The framework was applied in estimating two-week average ozone concentrations from 1999 to 2013 in models of each of the six MESA Air metropolitan regions. RESULTS: Ozone models perform well in both spatial and temporal dimensions at the agency monitoring sites in terms of prediction accuracy. City-specific leave-one (site)-out cross-validation R2 accounting for temporal and spatial variability ranged from 0.65 to 0.88 in the six regions. For predictions at the home sites, the R2 is between 0.60 and 0.91 for cross-validation that left out 10% of home sites in turn. The predicted ozone concentrations vary substantially over space and time in all the metropolitan regions. CONCLUSION: Using the available data, our spatiotemporal models are able to accurately predict long-term ozone concentrations at fine spatial scales in multiple regions. The model predictions will allow for investigation of the long-term health effects of ambient ozone concentrations in future epidemiological studies.

10.
Environ Health Perspect ; 123(4): 301-9, 2015 Apr.
Article in English | MEDLINE | ID: mdl-25398188

ABSTRACT

BACKGROUND: Cohort studies of the relationship between air pollution exposure and chronic health effects require predictions of exposure over long periods of time. OBJECTIVES: We developed a unified modeling approach for predicting fine particulate matter, nitrogen dioxide, oxides of nitrogen, and black carbon (as measured by light absorption coefficient) in six U.S. metropolitan regions from 1999 through early 2012 as part of the Multi-Ethnic Study of Atherosclerosis and Air Pollution (MESA Air). METHODS: We obtained monitoring data from regulatory networks and supplemented those data with study-specific measurements collected from MESA Air community locations and participants' homes. In each region, we applied a spatiotemporal model that included a long-term spatial mean, time trends with spatially varying coefficients, and a spatiotemporal residual. The mean structure was derived from a large set of geographic covariates that was reduced using partial least-squares regression. We estimated time trends from observed time series and used spatial smoothing methods to borrow strength between observations. RESULTS: Prediction accuracy was high for most models, with cross-validation R2 (R2CV) > 0.80 at regulatory and fixed sites for most regions and pollutants. At home sites, overall R2CV ranged from 0.45 to 0.92, and temporally adjusted R2CV ranged from 0.23 to 0.92. CONCLUSIONS: This novel spatiotemporal modeling approach provides accurate fine-scale predictions in multiple regions for four pollutants. We have generated participant-specific predictions for MESA Air to investigate health effects of long-term air pollution exposures. These successes highlight modeling advances that can be adopted more widely in modern cohort studies.


Subject(s)
Air Pollutants/analysis , Air Pollution/analysis , Atherosclerosis/metabolism , Environmental Monitoring/methods , Atherosclerosis/ethnology , Carbon/analysis , Ethnicity , Humans , Models, Theoretical , Nitrogen Oxides/analysis , Particulate Matter/analysis , Spatio-Temporal Analysis , United States
11.
Environ Health Perspect ; 122(4): 397-403, 2014 Apr.
Article in English | MEDLINE | ID: mdl-24518036

ABSTRACT

BACKGROUND: Estimating the burden of disease attributable to long-term exposure to fine particulate matter (PM2.5) in ambient air requires knowledge of both the shape and magnitude of the relative risk (RR) function. However, adequate direct evidence to identify the shape of the mortality RR functions at the high ambient concentrations observed in many places in the world is lacking. OBJECTIVE: We developed RR functions over the entire global exposure range for causes of mortality in adults: ischemic heart disease (IHD), cerebrovascular disease (stroke), chronic obstructive pulmonary disease (COPD), and lung cancer (LC). We also developed RR functions for the incidence of acute lower respiratory infection (ALRI) that can be used to estimate mortality and lost-years of healthy life in children < 5 years of age. METHODS: We fit an integrated exposure-response (IER) model by integrating available RR information from studies of ambient air pollution (AAP), second hand tobacco smoke, household solid cooking fuel, and active smoking (AS). AS exposures were converted to estimated annual PM2.5 exposure equivalents using inhaled doses of particle mass. We derived population attributable fractions (PAFs) for every country based on estimated worldwide ambient PM2.5 concentrations. RESULTS: The IER model was a superior predictor of RR compared with seven other forms previously used in burden assessments. The percent PAF attributable to AAP exposure varied among countries from 2 to 41 for IHD, 1 to 43 for stroke, < 1 to 21 for COPD, < 1 to 25 for LC, and < 1 to 38 for ALRI. CONCLUSIONS: We developed a fine particulate mass-based RR model that covered the global range of exposure by integrating RR information from different combustion types that generate emissions of particulate matter. The model can be updated as new RR information becomes available.


Subject(s)
Particulate Matter/toxicity , Cost of Illness , Environmental Exposure , Female , Humans , Male , Models, Theoretical
12.
Trop Med Int Health ; 19(3): 321-330, 2014 Mar.
Article in English | MEDLINE | ID: mdl-24382319

ABSTRACT

OBJECTIVES: To assess the bias incurred when curtailment of Lot Quality Assurance Sampling (LQAS) is ignored, to present unbiased estimators, to consider the impact of cluster sampling by simulation and to apply our method to published polio immunization data from Nigeria. METHODS: We present estimators of coverage when using two kinds of curtailed LQAS strategies: semicurtailed and curtailed. We study the proposed estimators with independent and clustered data using three field-tested LQAS designs for assessing polio vaccination coverage, with samples of size 60 and decision rules of 9, 21 and 33, and compare them to biased maximum likelihood estimators. Lastly, we present estimates of polio vaccination coverage from previously published data in 20 local government authorities (LGAs) from five Nigerian states. RESULTS: Simulations illustrate substantial bias if one ignores the curtailed sampling design. Proposed estimators show no bias. Clustering does not affect the bias of these estimators. Across simulations, standard errors show signs of inflation as clustering increases. Neither sampling strategy nor LQAS design influences estimates of polio vaccination coverage in 20 Nigerian LGAs. When coverage is low, semicurtailed LQAS strategies considerably reduces the sample size required to make a decision. Curtailed LQAS designs further reduce the sample size when coverage is high. CONCLUSIONS: Results presented dispel the misconception that curtailed LQAS data are unsuitable for estimation. These findings augment the utility of LQAS as a tool for monitoring vaccination efforts by demonstrating that unbiased estimation using curtailed designs is not only possible but these designs also reduce the sample size.


Subject(s)
Lot Quality Assurance Sampling/methods , Mass Vaccination/statistics & numerical data , Poliomyelitis/prevention & control , Program Evaluation/methods , Bias , Child, Preschool , Cluster Analysis , Humans , Infant , Local Government , Nigeria/epidemiology , Quality Assurance, Health Care/methods , Sample Size
13.
Ann Appl Stat ; 8(4): 2509-2537, 2014 Dec.
Article in English | MEDLINE | ID: mdl-27014398

ABSTRACT

There is growing evidence in the epidemiologic literature of the relationship between air pollution and adverse health outcomes. Prediction of individual air pollution exposure in the Environmental Protection Agency (EPA) funded Multi-Ethnic Study of Atheroscelerosis and Air Pollution (MESA Air) study relies on a flexible spatio-temporal prediction model that integrates land-use regression with kriging to account for spatial dependence in pollutant concentrations. Temporal variability is captured using temporal trends estimated via modified singular value decomposition and temporally varying spatial residuals. This model utilizes monitoring data from existing regulatory networks and supplementary MESA Air monitoring data to predict concentrations for individual cohort members. In general, spatio-temporal models are limited in their efficacy for large data sets due to computational intractability. We develop reduced-rank versions of the MESA Air spatio-temporal model. To do so, we apply low-rank kriging to account for spatial variation in the mean process and discuss the limitations of this approach. As an alternative, we represent spatial variation using thin plate regression splines. We compare the performance of the outlined models using EPA and MESA Air monitoring data for predicting concentrations of oxides of nitrogen (NO x )-a pollutant of primary interest in MESA Air-in the Los Angeles metropolitan area via cross-validated R2. Our findings suggest that use of reduced-rank models can improve computational efficiency in certain cases. Low-rank kriging and thin plate regression splines were competitive across the formulations considered, although TPRS appeared to be more robust in some settings.

14.
Emerg Themes Epidemiol ; 10(1): 11, 2013 Oct 26.
Article in English | MEDLINE | ID: mdl-24160725

ABSTRACT

BACKGROUND: Traditional Lot Quality Assurance Sampling (LQAS) designs assume observations are collected using simple random sampling. Alternatively, randomly sampling clusters of observations and then individuals within clusters reduces costs but decreases the precision of the classifications. In this paper, we develop a general framework for designing the cluster(C)-LQAS system and illustrate the method with the design of data quality assessments for the community health worker program in Rwanda. RESULTS: To determine sample size and decision rules for C-LQAS, we use the beta-binomial distribution to account for inflated risk of errors introduced by sampling clusters at the first stage. We present general theory and code for sample size calculations.The C-LQAS sample sizes provided in this paper constrain misclassification risks below user-specified limits. Multiple C-LQAS systems meet the specified risk requirements, but numerous considerations, including per-cluster versus per-individual sampling costs, help identify optimal systems for distinct applications. CONCLUSIONS: We show the utility of C-LQAS for data quality assessments, but the method generalizes to numerous applications. This paper provides the necessary technical detail and supplemental code to support the design of C-LQAS for specific programs.

15.
PLoS Negl Trop Dis ; 7(8): e2389, 2013.
Article in English | MEDLINE | ID: mdl-23991238

ABSTRACT

BACKGROUND: Implementation of trachoma control strategies requires reliable district-level estimates of trachomatous inflammation-follicular (TF), generally collected using the recommended gold-standard cluster randomized surveys (CRS). Integrated Threshold Mapping (ITM) has been proposed as an integrated and cost-effective means of rapidly surveying trachoma in order to classify districts according to treatment thresholds. ITM differs from CRS in a number of important ways, including the use of a school-based sampling platform for children aged 1-9 and a different age distribution of participants. This study uses computerised sampling simulations to compare the performance of these survey designs and evaluate the impact of varying key parameters. METHODOLOGY/PRINCIPAL FINDINGS: Realistic pseudo gold standard data for 100 districts were generated that maintained the relative risk of disease between important sub-groups and incorporated empirical estimates of disease clustering at the household, village and district level. To simulate the different sampling approaches, 20 clusters were selected from each district, with individuals sampled according to the protocol for ITM and CRS. Results showed that ITM generally under-estimated the true prevalence of TF over a range of epidemiological settings and introduced more district misclassification according to treatment thresholds than did CRS. However, the extent of underestimation and resulting misclassification was found to be dependent on three main factors: (i) the district prevalence of TF; (ii) the relative risk of TF between enrolled and non-enrolled children within clusters; and (iii) the enrollment rate in schools. CONCLUSIONS/SIGNIFICANCE: Although in some contexts the two methodologies may be equivalent, ITM can introduce a bias-dependent shift as prevalence of TF increases, resulting in a greater risk of misclassification around treatment thresholds. In addition to strengthening the evidence base around choice of trachoma survey methodologies, this study illustrates the use of a simulated approach in addressing operational research questions for trachoma but also other NTDs.


Subject(s)
Communicable Disease Control/methods , Epidemiologic Methods , Trachoma/epidemiology , Trachoma/prevention & control , Adolescent , Adult , Child , Child, Preschool , Computer Simulation , Female , Humans , Infant , Male , Middle Aged , Prevalence , Sampling Studies , Young Adult
16.
PLoS One ; 8(4): e60308, 2013.
Article in English | MEDLINE | ID: mdl-23577099

ABSTRACT

Hypertension is an important and modifiable risk factor for cardiovascular disease and mortality. Over the last decade, national-levels of controlled hypertension have increased, but little information on hypertension prevalence and trends in hypertension treatment and control exists at the county-level. We estimate trends in prevalence, awareness, treatment, and control of hypertension in US counties using data from the National Health and Nutrition Examination Survey (NHANES) in five two-year waves from 1999-2008 including 26,349 adults aged 30 years and older and from the Behavioral Risk Factor Surveillance System (BRFSS) from 1997-2009 including 1,283,722 adults aged 30 years and older. Hypertension was defined as systolic blood pressure (BP) of at least 140 mm Hg, self-reported use of antihypertensive treatment, or both. Hypertension control was defined as systolic BP less than 140 mm Hg. The median prevalence of total hypertension in 2009 was estimated at 37.6% (range: 26.5 to 54.4%) in men and 40.1% (range: 28.5 to 57.9%) in women. Within-state differences in the county prevalence of uncontrolled hypertension were as high as 7.8 percentage points in 2009. Awareness, treatment, and control was highest in the southeastern US, and increased between 2001 and 2009 on average. The median county-level control in men was 57.7% (range: 43.4 to 65.9%) and in women was 57.1% (range: 43.0 to 65.46%) in 2009, with highest rates in white men and black women. While control of hypertension is on the rise, prevalence of total hypertension continues to increase in the US. Concurrent increases in treatment and control of hypertension are promising, but efforts to decrease the prevalence of hypertension are needed.


Subject(s)
Health Knowledge, Attitudes, Practice , Hypertension/epidemiology , Hypertension/therapy , Adult , Female , Humans , Hypertension/ethnology , Hypertension/prevention & control , Male , Nutrition Surveys , Prevalence , Racial Groups , Self Report , Sex Distribution , United States/epidemiology
17.
Int J Epidemiol ; 42(1): 346-55, 2013 Feb.
Article in English | MEDLINE | ID: mdl-23378151

ABSTRACT

BACKGROUND: Lot Quality Assurance Sampling (LQAS) is a provably useful tool for monitoring health programmes. Although LQAS ensures acceptable Producer and Consumer risks, the literature alleges that the method suffers from poor specificity and positive predictive values (PPVs). We suggest that poor LQAS performance is due, in part, to variation in the true underlying distribution. However, until now the role of the underlying distribution in expected performance has not been adequately examined. METHODS: We present Bayesian-LQAS (B-LQAS), an approach to incorporating prior information into the choice of the LQAS sample size and decision rule, and explore its properties through a numerical study. Additionally, we analyse vaccination coverage data from UNICEF's State of the World's Children in 1968-1989 and 2008 to exemplify the performance of LQAS and B-LQAS. RESULTS: Results of our numerical study show that the choice of LQAS sample size and decision rule is sensitive to the distribution of prior information, as well as to individual beliefs about the importance of correct classification. Application of the B-LQAS approach to the UNICEF data improves specificity and PPV in both time periods (1968-1989 and 2008) with minimal reductions in sensitivity and negative predictive value. CONCLUSIONS: LQAS is shown to be a robust tool that is not necessarily prone to poor specificity and PPV as previously alleged. In situations where prior or historical data are available, B-LQAS can lead to improvements in expected performance.


Subject(s)
Bayes Theorem , Immunization/statistics & numerical data , Lot Quality Assurance Sampling , Child , Humans , Measles Vaccine/administration & dosage , Population Surveillance , Predictive Value of Tests , Program Evaluation/methods , Quality Assurance, Health Care/methods , Research Design , Sensitivity and Specificity , United Nations
18.
PLoS Negl Trop Dis ; 6(9): e1806, 2012.
Article in English | MEDLINE | ID: mdl-22970333

ABSTRACT

BACKGROUND: Originally a binary classifier, Lot Quality Assurance Sampling (LQAS) has proven to be a useful tool for classification of the prevalence of Schistosoma mansoni into multiple categories (≤10%, >10 and <50%, ≥50%), and semi-curtailed sampling has been shown to effectively reduce the number of observations needed to reach a decision. To date the statistical underpinnings for Multiple Category-LQAS (MC-LQAS) have not received full treatment. We explore the analytical properties of MC-LQAS, and validate its use for the classification of S. mansoni prevalence in multiple settings in East Africa. METHODOLOGY: We outline MC-LQAS design principles and formulae for operating characteristic curves. In addition, we derive the average sample number for MC-LQAS when utilizing semi-curtailed sampling and introduce curtailed sampling in this setting. We also assess the performance of MC-LQAS designs with maximum sample sizes of n=15 and n=25 via a weighted kappa-statistic using S. mansoni data collected in 388 schools from four studies in East Africa. PRINCIPLE FINDINGS: Overall performance of MC-LQAS classification was high (kappa-statistic of 0.87). In three of the studies, the kappa-statistic for a design with n=15 was greater than 0.75. In the fourth study, where these designs performed poorly (kappa-statistic less than 0.50), the majority of observations fell in regions where potential error is known to be high. Employment of semi-curtailed and curtailed sampling further reduced the sample size by as many as 0.5 and 3.5 observations per school, respectively, without increasing classification error. CONCLUSION/SIGNIFICANCE: This work provides the needed analytics to understand the properties of MC-LQAS for assessing the prevalance of S. mansoni and shows that in most settings a sample size of 15 children provides a reliable classification of schools.


Subject(s)
Lot Quality Assurance Sampling/methods , Schistosoma mansoni/isolation & purification , Schistosomiasis mansoni/epidemiology , Schistosomiasis mansoni/prevention & control , Adolescent , Africa, Eastern/epidemiology , Animals , Child , Female , Humans , Male , Prevalence , Schistosomiasis mansoni/drug therapy
19.
Emerg Themes Epidemiol ; 7(1): 3, 2010 Jun 09.
Article in English | MEDLINE | ID: mdl-20534159

ABSTRACT

Lot Quality Assurance Sampling (LQAS) applications in health have generally relied on frequentist interpretations for statistical validity. Yet health professionals often seek statements about the probability distribution of unknown parameters to answer questions of interest. The frequentist paradigm does not pretend to yield such information, although a Bayesian formulation might. This is the source of an error made in a recent paper published in this journal. Many applications lend themselves to a Bayesian treatment, and would benefit from such considerations in their design. We discuss Bayes-LQAS (B-LQAS), which allows for incorporation of prior information into the LQAS classification procedure, and thus shows how to correct the aforementioned error. Further, we pay special attention to the formulation of Bayes Operating Characteristic Curves and the use of prior information to improve survey designs. As a motivating example, we discuss the classification of Global Acute Malnutrition prevalence and draw parallels between the Bayes and classical classifications schemes. We also illustrate the impact of informative and non-informative priors on the survey design. Results indicate that using a Bayesian approach allows the incorporation of expert information and/or historical data and is thus potentially a valuable tool for making accurate and precise classifications.

20.
J R Stat Soc Ser A Stat Soc ; 172(2): 495-510, 2009 04.
Article in English | MEDLINE | ID: mdl-20011037

ABSTRACT

Traditional lot quality assurance sampling (LQAS) methods require simple random sampling to guarantee valid results. However, cluster sampling has been proposed to reduce the number of random starting points. This study uses simulations to examine the classification error of two such designs, a 67x3 (67 clusters of three observations) and a 33x6 (33 clusters of six observations) sampling scheme to assess the prevalence of global acute malnutrition (GAM). Further, we explore the use of a 67x3 sequential sampling scheme for LQAS classification of GAM prevalence. Results indicate that, for independent clusters with moderate intracluster correlation for the GAM outcome, the three sampling designs maintain approximate validity for LQAS analysis. Sequential sampling can substantially reduce the average sample size that is required for data collection. The presence of intercluster correlation can impact dramatically the classification error that is associated with LQAS analysis.

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