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Whole genomes from bacteria collected at diagnostic units around the world 2020.

Nag, Sidsel; Larsen, Gunhild; Szarvas, Judit; Birkedahl, Laura Elmlund Kohl; Gulyás, Gábor Máté; Ciok, Wojchiech Jakub; Lagermann, Timmie Mikkel; Tafaj, Silva; Bradbury, Susan; Collignon, Peter; Daley, Denise; Dougnon, Victorien; Fabiyi, Kafayath; Coulibaly, Boubacar; Dembélé, René; Nikiema, Georgette; Magloire, Natama; Ouindgueta, Isidore Juste; Hossain, Zenat Zebin; Begum, Anowara; Donchev, Deyan; Diggle, Mathew; Turnbull, LeeAnn; Lévesque, Simon; Berlinger, Livia; Sogaard, Kirstine Kobberoe; Guevara, Paula Diaz; Valderrama, Carolina Duarte; Maikanti, Panagiota; Amlerova, Jana; Drevinek, Pavel; Tkadlec, Jan; Dilas, Milica; Kaasch, Achim; Westh, Henrik Torkil; Bachtarzi, Mohamed Azzedine; Amhis, Wahiba; Salazar, Carolina Elisabeth Satán; Villacis, JoséEduardo; Lúzon, Mária Angeles Dominguez; Palau, Dámaris Berbel; Duployez, Claire; Paluche, Maxime; Asante-Sefa, Solomon; Moller, Mie; Ip, Margaret; Marekovic, Ivana; Pál-Sonnevend, Agnes; Cocuzza, Clementiza Elvezia; Dambrauskiene, Asta.

Sci Data ; 10(1): 628, 2023 09 16.

Article in English | MEDLINE | ID: mdl-37717051

ABSTRACT

The Two Weeks in the World research project has resulted in a dataset of 3087 clinically relevant bacterial genomes with pertaining metadata, collected from 59 diagnostic units in 35 countries around the world during 2020. A relational database is available with metadata and summary data from selected bioinformatic analysis, such as species prediction and identification of acquired resistance genes.

Subject(s)

Bacteria , Genome, Bacterial , Bacteria/genetics , Computational Biology , Databases, Factual , Metadata

ABSTRACT

Subject(s)

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