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1.
Am J Med Genet ; 99(1): 21-8, 2001 Feb 15.
Article in English | MEDLINE | ID: mdl-11170089

ABSTRACT

We present a patient with bilateral retinoblastoma and developmental delay who has an abnormal male karyotype containing 47 chromosomes, including an acentric derivative chromosome 13. We postulate that the derivative 13 occurred after a break at 13q14, with the proximal portion of the chromosome forming a ring and the distal portion undergoing duplication. Thus, this patient is trisomic for 13q14-->qter. The derivative chromosome with duplicated distal portion (13q14-->qter) lacked the 13 centromere and was negative for chromosome 13 alpha-satellite DNA by low stringency FISH. Nevertheless, this chromosome is stably transmitted in lymphocytes and fibroblasts. A single primary constriction was observed at band 13q21, consistent with activation of a latent centromere (neocentromere) at this band. The neocentromere on der(13) was positive for multiple centromeric proteins, suggesting that it acts as the functional centromere. By FISH, the Rb gene was present on the normal 13, the proximally derived ring chromosome, but not on the derivative chromosome. Although there was no evidence for disruption of the Rb gene, this chromosome rearrangement most likely results in abnormal expression of the Rb gene product.


Subject(s)
Centromere/genetics , Chromosomes, Human, Pair 13/genetics , Retinal Neoplasms/genetics , Retinoblastoma/genetics , Ring Chromosomes , Chromosome Banding , Humans , In Situ Hybridization, Fluorescence , Infant , Karyotyping , Male , Retinoblastoma Protein/genetics
2.
Mol Diagn ; 4(4): 269-83, 1999 Dec.
Article in English | MEDLINE | ID: mdl-10671636

ABSTRACT

BACKGROUND: AF-4 is a common partner gene of MLL. AF-4 breakpoints occur in introns, but most AF-4 introns are uncharacterized. METHODS AND RESULTS: We cloned AF-4 intron 4 and examined the frequency of breakpoints in this intron. The 5.8-kb intron is rich in repeat sequences and was the site of translocation in 3 of 17 leukemias with t(4;11). We cloned the der (11) and der (4) breakpoints and isolated the fusion transcripts in the cell line MV4-11 and in a de novo acute lymphoblastic leukemia (ALL). Both translocations joined MLL intron 6 and AF-4 intron 4. In MV4-11, 249 bases from AF-4 were present in both derivative chromosomes, indicating duplication. In the de novo ALL, duplication of 446 bases from MLL and AF-4 occurred. Reciprocal fusion transcripts were expressed. CONCLUSIONS: Intronic sequence of AF-4 is useful for molecular diagnosis of t(4;11). Duplicated intronic regions suggest staggered chromosomal breakage.


Subject(s)
Chromosomes, Human, Pair 11/genetics , Chromosomes, Human, Pair 4/genetics , Gene Duplication , Leukemia, Myeloid, Acute/genetics , Precursor Cell Lymphoblastic Leukemia-Lymphoma/genetics , Translocation, Genetic/genetics , Adolescent , Adult , Aged , Alu Elements , Amino Acid Sequence , Base Sequence , Child , Humans , In Situ Hybridization, Fluorescence , Infant , Infant, Newborn , Introns , Karyotyping , Molecular Sequence Data , Reverse Transcriptase Polymerase Chain Reaction , Sequence Alignment , Sequence Analysis, DNA , Tumor Cells, Cultured
3.
Am J Med Genet ; 56(1): 22-4, 1995 Mar 13.
Article in English | MEDLINE | ID: mdl-7747780

ABSTRACT

We describe a patient with manifestations of the mosaic trisomy 8 syndrome and mosaicism for a minute marker chromosome. Fluorescence in situ hybridization (FISH) with a chromosome 8 probe confirmed that the marker was derived from chromosome 8. This is the smallest piece of chromosome 8 to be reported in a patient with mosaic trisomy 8 syndrome. When the clinical picture is strongly suggestive of trisomy for a specific chromosome region, we believe that FISH can be used to test markers in a guided, rather than random, fashion.


Subject(s)
Chromosomes, Human, Pair 8 , Mosaicism/diagnosis , Trisomy , Chromosome Banding , Genetic Markers , Humans , Infant, Newborn , Male , Mosaicism/genetics , Phenotype
4.
Eur J Biochem ; 64(2): 549-63, 1976 May 01.
Article in English | MEDLINE | ID: mdl-179816

ABSTRACT

The detailed molecular structure of the complex formed by the apoprotein from porcine high density lipoprotein and dimyristoly phosphatidylcholine (lecithin) has been investigated by a range of physical techniques. The complex, an oblate ellipsoid with major axis 11.0 nm and minor axis 5.5 nm (see the accompanying paper), is comprised of a section of lecithin bilayer with apoprotein at the surface. The main site of interaction between protein and lipid is in the lipid glycerophosphorylcholine group region; as with native high density lipoprotein the surface of the particle consists of a mosaic of lecithin polar groups and protein. The formation of this mosaic reduces the cooperativity of the lecithin chain motions and changes the curvature of the lipid-water interface, as compared to a bilayer. Otherwise, there are no major changes in lecithin motions indicating that no strong binding of lipid to protein occurs. The interaction involves the intercalation of amphipathic, 60% alpha-helical, apoprotein molecules among the lecithin molecules so that the protein residues at the lipid-water interface. The apoprotein has a high affinity for the lipid-water interface but specific lipid-protein interactions are not involved.


Subject(s)
Apoproteins , Lipoproteins, HDL , Phosphatidylcholines , Amino Acid Sequence , Animals , Apoproteins/blood , Binding Sites , Circular Dichroism , Electron Spin Resonance Spectroscopy , Lipoproteins, HDL/blood , Magnetic Resonance Spectroscopy , Mathematics , Models, Molecular , Myristic Acids , Protein Binding , Protein Conformation , Spectrophotometry, Ultraviolet , Spin Labels , Swine , Temperature
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