Iron(iii) bis(pyrazol-1-yl)acetate based decanuclear metallacycles: synthesis, structure, magnetic properties and DFT calculations.

The synthesis, structural aspects, magnetic interpretation and theoretical rationalizations for a new member of the ferric wheel family, a decanuclear iron(iii) complex with the formula [Fe10(bdtbpza)10(µ2-OCH3)20] (1), featuring the N,N,O tridentate bis(3,5-di-tert-butylpyrazol-1-yl)acetate ligand, are reported. The influence of the steric effect on both the core geometry and coordination mode is observed. Temperature dependent (2.0-300 K range) magnetic susceptibility studies carried out on complexes 1 established unequivocally antiferromagnetic (AF) interactions between high-spin iron(iii) centers (S = 5/2), leading to a ground state S = 0. The mechanism of AF intramolecular coupling was proved using a broken-symmetry approach within the density functional method at the B3LYP/def2-TZVP(-f)/def2-SVP level of theory.

Understanding natural semiquinone radicals--multifrequency EPR and relativistic DFT studies of the structure of Hg(II) complexes.

Multifrequency EPR spectroscopy and DFT calculations were used to investigate Hg(II) complexes with semiquinone radical ligands formed in a direct reaction between the metal ions and tannic acid (a polyphenol closely related to tannins). Because of the intricate structure of tannic acid a vast array of substituted phenolic compounds were tested to find a structural model mimicking its ability to react with Hg(II) ions. The components of the g matrix (the g tensor) determined from the high field (208 GHz) EPR spectra of the Hg(II) complexes with the radical ligands derived from tannic acid and from the model compounds were analogous, indicating a similar coordination mode in all the studied Hg(II) complexes. Since catechol (1,2-dihydroxybenzene) was the simplest compound undergoing the reaction with Hg(II) it was selected for DFT studies which were aimed at providing an insight into the structural properties of the investigated complexes. Various coordination numbers and different conformations and protonation states of the ligands were included in the theoretical analyses. g Matrices were computed for all the DFT optimized geometries. A good agreement between the theoretical and experimental values was observed only for the model with the Hg(II) ion tetracoordinated by two ligands, one of the ligands being monoprotonated with the unpaired electron mainly localized on it.

L-tyrosinatonickel(II) complex: synthesis and structural, spectroscopic, magnetic, and biological properties of 2{[Ni(L-Tyr)2(bpy)]}·3H2O·CH3OH.

The complex 2{[Ni(L-Tyr)2(bpy)]}·3H2O·CH3OH [1, where L-Tyr = L-tyrosine; bpy = 2,2'-bipyridine (2,2'-bpy)] was obtained in crystalline form and characterized by X-ray and spectroscopic (FT-IR, NIR-vis-UV, and HFEPR) and magnetic methods. The complex crystallized in the hexagonal system with a = b = 12.8116(18) Å, c = 30.035(6) Å, and space group P3221. The six-coordination sphere around the Ni(2+) ion is formed by two N and two O L-tyrosinato atoms and completed by two N atoms of the 2,2'-bpy molecule. Neighboring [Ni(L-Tyr)2(bpy)] units are joined via weak hydrogen bonds, which create a helical polymeric chain. The coordinated atoms form a strongly distorted cis-NiN2N2'O2 octahedral chromophore. The solid-state electronic spectrum of complex 1 was analyzed assuming D2h symmetry, and the observed bands were assigned to (3)B1g → (3)Ag, (3)B1g → (3)B3g, (3)B1g → (3)B2g, (3)B1g → (3)B3g, (3)B1g → (3)B1g, and (3)B1g → (3)B2g transitions for the I and II d-d bands, respectively. The crystal-field parameters found for D2h symmetry are Dq = 1066 cm(-1), Ds = 617 cm(-1), Dt = -93 cm(-1), B22 = 7000 cm(-1), and Racah B = 812 cm(-1). Magnetic studies revealed the occurrence of hydrogen-bonded metal pairs. The spin Hamiltonian parameters D = -3.262 cm(-1) and E = -0.1094 cm(-1), determined from high-field, high-frequency electron paramagnetic resonance spectra, together with a weak antiferromagnetic exchange parameter J = -0.477 cm(-1), allowed us to reproduce the powder magnetic susceptibility and field-dependent magnetization of the complex. The biological activity of 1 has been tested by using the Fusarium solani, Penicillium verrucosum, and Aspergillus flavus fungi strains and Escherichia coli, Pseudomonas fluorescens, Serratia marcescens, and Bacillus subtilis bacterial strains.

Synthesis, crystal structure, spectroscopic, magnetic, theoretical, and microbiological studies of a nickel(II) complex of L-tyrosine and imidazole, [Ni(Im)2(L-tyr)2]·4H2O.

The [Ni(Im)(2)(L-tyr)(2)]·4H(2)O (1) complex was obtained in crystalline form as a product of interaction of L-tyrosine sodium salt, imidazole, and NiSO(4). The X-ray structure was determined, and the spectral (IR, FIR, NIR-vis-UV, HF EPR) and magnetic properties were studied. The Ni(2+) ion is hexacoordinated by the N and O atoms from two L-tyrosine molecules and by two N atoms of imidazole, resulting in a slightly distorted octahedral [NiN(2)N(2)'O(2)] geometry with a tetragonality parameter T = 0.995. The bands observed in the electronic spectra were ascribed to the six spin-allowed electronic transitions (3)B(1g) → (3)E(g) and (3)B(2g), (3)B(1g) → (3)A(2g) and (3)E(g), and (3)B(1g) → (3)A(2g) and (3)E(g). The spin Hamiltonian parameters g, D, and E, which were determined from high-field HF EPR spectra, excellently reproduced the magnetic properties of the complex. Calculation of the zero-field splitting in the S = 1 state of nickel(II) using DFT and UHF was attempted. The biological activity of the complexes has been tested for antifungal and antibacterial effects against Aspergillus flavus, Fusarium solani, Penicillium verrucosu, Bacillus subtilis, Serratia marcescens, Pseudomonas fluorescens, and Escherichia coli.

Influence of Pb(II) ions on the EPR properties of the semiquinone radicals of humic acids and model compounds: high field EPR and relativistic DFT studies.

X-band (9.76 GHz) and high field (416.00 GHz) electron paramagnetic resonance spectroscopy (EPR) was used to study the interactions between Pb(II) ions and semiquinone radicals of natural humic acids and their simple models. The EPR experiments were performed on powder samples. The formation of Pb(II) complexes with the radicals was accompanied by a significant decrease of g parameters as compared to those observed for parent radicals. Two types of complexes were identified depending on the initial concentration of Pb(II) ions. For one of them the anisotropic hyperfine coupling with the (207)Pb nucleus was observed. Systematic DFT calculations were carried out for complexes with different forms of radical ligands (L(2)(-*), HL(-*), and H(2)L*) derived from 3,4-dihydroxybenzoic acid representing different ligation schemes. The g parameters calculated for the structure characterized by a significant accumulation of spin density on the Pb atom are strongly deviated from the values observed experimentally. Moreover, a decrease of the spin population on all oxygen atoms as a result of complexation of Pb(II) via carboxyl oxygens and protonation of hydroxyl oxygens is required to reproduce the experimental g parameters.

X-ray crystal structures, electron paramagnetic resonance, and magnetic studies on strongly antiferromagnetically coupled mixed mu-hydroxide-mu-N(1),N(2)-triazole-bridged one dimensional linear chain copper(II) complexes.

Four new metal-organic polymeric complexes, {[Cu(mu-OH)(mu-ClPhtrz)][(H 2O)(BF 4)]} n ( 1), {[Cu(mu-OH)(mu-BrPhtrz)][(H 2O)(BF 4)]} n ( 2), {[Cu(mu-OH)(mu-ClPhtrz)(H 2O)](NO 3)} n ( 3), and {[Cu(mu-OH)(mu-BrPhtrz)(H 2O)](NO 3)} n ( 4) (ClPhtrz = N-[( E)-(4-chlorophenyl)methylidene]-4 H-1,2,4-triazol-4-amine; BrPhtrz = N-[( E)-(4-bromophenyl)methylidene]-4 H-1,2,4-triazol-4-amine), were synthesized in a reaction of substituted 1,2,4-triazole and various copper(II) salts in water/acetonitrile solutions. The structures of 1- 4 were characterized by single-crystal X-ray diffraction analysis. The Cu(II) ions are linked both by single N (1), N (2)-1,2,4-triazole and hydroxide bridges yielding one dimensional (1D) linear chain polymers. The tetragonally distorted octahedral geometry of copper atoms is completed alternately by two water and two BF 4 (-) anion molecules in 1 and 2 but solely by two water molecules in 3 and 4. Magnetic properties of all complexes were studied by variable temperature magnetic susceptibility measurements. The Cu(II) ions are strongly antiferromagnetically coupled with J = -419(1) cm (-1) ( 1), -412(2) cm (-1) ( 2), -391(3) cm (-1) ( 3), and -608(2) cm (-1) ( 4) (based on the Hamiltonian H = - J[ summation operator S i . S i+ 1]). The nature and the magnitude of the antiferromagnetic exchange were discussed on the basis of complementarity/countercomplementarity of the two competing bridges.

Multiple-frequency EPR spectra of two aqueous Gd3+ polyamino polypyridine carboxylate complexes: a study of high field effects.

In the search for highly efficient magnetic resonance imaging contrast agents, polyamino polypyridine carboxylate complexes of Gd3+ have shown unusual properties with both very rapid and very slow electron spin relaxation in solution observed by electron paramagnetic resonance. Since the relationship between the molecular structure and the electron spin properties remains quite obscure at this point, detailed studies of such complexes may offer useful clues for the design of Gd3+ compounds with tailored electronic features. Furthermore, the availability of very high-frequency EPR spectrometers based on quasi-optical components provides us with an opportunity to test the existing relaxation theories at increasingly high magnetic fields and observation frequencies. We present a detailed EPR study of two gadolinium polyamino polypyridine carboxylate complexes, [Gd(tpaen)]- and [Gd(bpatcn)(H2O)], in liquid aqueous solutions at multiple temperatures and frequencies between 9.5 and 325 GHz. We analyze the results using the model of random zero-field splitting modulations through Brownian rotation and molecular deformations. We consider the effect of concentration on the line width, as well as the possible existence of an additional g-tensor modulation relaxation mechanism and its possible impact on future experiments. We use (17)O NMR to characterize the water exchange rate on [Gd(bpatcn)(H2O)] and find it to be slow (approximately 0.6 x 10(6) s-1).

Local polarity and hydrogen bonding inside the Sec14p phospholipid-binding cavity: high-field multi-frequency electron paramagnetic resonance studies.

Sec14p promotes the energy-independent transfer of either phosphatidylinositol (PtdIns) or phosphatidylcholine (PtdCho) between lipid bilayers in vitro and represents the major PtdIns/PtdCho transfer protein in the budding yeast Saccharomyces cerevisiae. Herein, we employ multi-frequency high-field electron paramagnetic resonance (EPR) to analyze the electrostatic and hydrogen-bonding microenvironments for series of doxyl-labeled PtdCho molecules bound by Sec14p in a soluble protein-PtdCho complex. A structurally similar compound, 5-doxyl stearic acid dissolved in a series of solvents, was used for experimental calibration. The experiments yielded two-component rigid limit 130- and 220-GHz EPR spectra with excellent resolution in the gx region. Those components were assigned to hydrogen-bonded and nonhydrogen-bonded nitroxide species. Partially resolved 130-GHz EPR spectra from n-doxyl-PtdCho bound to Sec14p were analyzed using this two-component model and allowed quantification of two parameters. First, the fraction of hydrogen-bonded nitroxide species for each n-doxyl-PtdCho was calculated. Second, the proticity profile along the phospholipid-binding cavity of Sec14p was characterized. The data suggest the polarity gradient inside the Sec14p cavity is a significant contributor to the driving molecular forces for extracting a phospholipid from the bilayer. Finally, the enhanced g-factor resolution of EPR at 130 and 220 GHz provides researchers with a spectroscopic tool to deconvolute two major contributions to the x-component of the nitroxide g-matrix: hydrogen-bond formation and local electrostatic effects.

Structural, spectroscopic, and magnetic study of bis(9,10-dihydro-9-oxo-10-acridineacetate)bis(imidazole)bis(methanol) nickel(II).

The mixed ligand complex [Ni(CMA)2(im)2(MeOH)2] (where CMA = 9,10-dihydro-9-oxo-10-acridineacetate ion, im = imidazole) was prepared, and its crystal and molecular structure were determined. The nickel ions are hexa-coordinated by four oxygen atoms of the carboxylate and hydroxyl groups and by two imidazole nitrogen atoms, to form a distorted octahedral arrangement. The structure consists of a one-dimensional network of the complex molecules connected by strong intermolecular hydrogen bonds. The weak intermolecular C-H...X hydrogen bonds and stacking interactions make up the 2-D structure. Very strong intramolecular hydrogen bonds significantly affect the geometry and vibrational characteristics of the carboxylate group. The UV-vis-NIR electronic spectrum was deconvoluted into Gaussian components. Electronic bands of the Ni(II) ion were assigned to suitable spin-allowed transitions in the D4h symmetry environment. The single ion zero-field splitting (ZFS) parameters for the S = 1 state of Ni(II), as well as the g components, have been determined by high-field and high-frequency EPR (HF-HFEPR) spectroscopy over the frequency range of 52-432 GHz and with the magnetic fields up to 14.5 T: D = 5.77(1) cm-1, E = 1.636(2) cm-1, gx = 2.29(1), gy = 2.18(1), and gz = 2.13(1). These values allowed us to simulate the powder magnetic susceptibility and field-dependent magnetization of the complex.

EPR spectroscopic characterization of the manganese center and a free radical in the oxalate decarboxylase reaction: identification of a tyrosyl radical during turnover.

Several molecular mechanisms for cleavage of the oxalate carbon-carbon bond by manganese-dependent oxalate decarboxylase have recently been proposed involving high oxidation states of manganese. We have examined the oxalate decarboxylase from Bacillus subtilis by electron paramagnetic resonance in perpendicular and parallel polarization configurations to test for the presence of such species in the resting state and during enzymatic turnover. Simulation and the position of the half-field Mn(II) line suggest a nearly octahedral metal geometry in the resting state. No spectroscopic signature for Mn(III) or Mn(IV) is seen in parallel mode EPR for samples frozen during turnover, consistent either with a large zero-field splitting in the oxidized metal center or undetectable levels of these putative high-valent intermediates in the steady state. A narrow, featureless g = 2.0 species was also observed in perpendicular mode in the presence of substrate, enzyme, and dioxygen. Additional splittings in the signal envelope became apparent when spectra were taken at higher temperatures. Isotopic editing resulted in an altered line shape only when tyrosine residues of the enzyme were specifically deuterated. Spectral processing confirmed multiple splittings with isotopically neutral enzyme that collapsed to a single prominent splitting in the deuterated enzyme. These results are consistent with formation of an enzyme-based tyrosyl radical upon oxalate exposure. Modestly enhanced relaxation relative to abiological tyrosyl radicals was observed, but site-directed mutagenesis indicated that conserved tyrosine residues in the active site do not host the unpaired spin. Potential roles for manganese and a peripheral tyrosyl radical during steady-state turnover are discussed.

Phosphorescence and optically detected magnetic resonance of 4',6-diamidino-2-phenylindole (DAPI) and its complexes with [d(CGACGTCG)]2 and [d(GGCCAATTGG)]2.

Phosphorescence and optical detection of magnetic resonance (ODMR) is used to study the excited triplet state of 4',6-diamidino-2-phenyl indole (DAPI) and its complexes with the oligonucleotides [d(CGACGTCG)](2) and [d(GGCCAATTGG)](2), where binding occurs by intercalation between GC base pairs and by minor groove insertion, respectively. Weaker binding of DAPI to phosphate is also detected, and the triplet state of this complex is characterized. Intercalation with [d(CGACGTCG)](2) produces a phosphorescence redshift, while groove binding with [d(GGCCAATTGG)](2) leads to a blueshift. Both binding modes give rise to a small decrease in the zero-field splitting (zfs) of the DAPI triplet state. The largest redshift and zfs decrease are found for the phosphate complex. The phosphorescence lifetimes are shorter by an order of magnitude than that of indole or tryptophan as expected for the lower triplet state energy, E(00), of DAPI. The lifetimes agree well with a correlation with E(00) introduced by Siebrand [Siebrand, W. (1966) J. Chem. Phys. 44, 4055-4057] except for the [d(GGCCAATTGG)](2) minor groove complex with a lifetime that is about 20% too long. The longer lifetime is attributed to distortion of the amidino groups in this complex, resulting in less efficient intersystem crossing.

Electron-Transfer Processes in Indium(II) Iodide-o-Quinone Systems.

Indium(II) iodide reacts with various substituted o-quinones in nonaqueous solution by successive one-electron-transfer reactions to give (SQ)InI(2) products (SQ = semiquinonate radical anion). Electron spin resonance spectroscopy demonstrates the presence of both mono- and diradical species in the reaction mixture. Addition of 4-picoline to a mixture of In(2)I(4) and TBQ (=3,5-di-tert-butyl-o-quinone) in toluene causes the precipitation of the indium(III)-semiquinonate complex (TBSQ)InI(2)(pic)(2) whose structure has been established by X-ray crystallography: space group P&onemacr;, with a = 13.013(3) Å, b = 13.317(3) Å, c = 10.828(5) Å, alpha = 97.71(3) degrees, beta = 107.98(3) degrees, gamma = 103.92(3) degrees, V = 1684.8(1.2) Å(3), Z = 2. Refinement converged at R = 0.051 and R(w) = 0.064 for 5918 reflections at 23 degrees C. The InO(2)N(2)I(2) kernel is pseudooctahedral, and the structure confirms the presence of the semiquinonate ligand. A reaction scheme which incorporates these results is proposed.