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J Mol Biol ; 304(1): 43-53, 2000 Nov 17.
Article in English | MEDLINE | ID: mdl-11071809

ABSTRACT

The 60-fold reduced phosphorylation rate of azidothymidine (AZT) monophosphate (AZTMP), the partially activated AZT metabolite, by human thymidylate kinase (TMPK) severely limits the efficacy of this anti-HIV prodrug. Crystal structures of different TMPK nucleotide complexes indicate that steric hindrance by the azido group of AZTMP prevents formation of the catalytically active closed conformation of the P-loop of TMPK. The F105Y mutant and a chimeric mutant that contains sequences of the human and Escherichia coli enzyme phosphorylate AZTMP 20-fold faster than the wild-type enzyme. The structural basis of the increased activity is assigned to stabilization of the closed P-loop conformation.


Subject(s)
Anti-HIV Agents/metabolism , Mutation/genetics , Nucleoside-Phosphate Kinase/chemistry , Nucleoside-Phosphate Kinase/metabolism , Prodrugs/metabolism , Thymine Nucleotides/metabolism , Zidovudine/analogs & derivatives , Zidovudine/metabolism , Binding Sites , Catalysis , Crystallography, X-Ray , Dideoxynucleotides , Enzyme Stability , Escherichia coli/enzymology , Escherichia coli/genetics , Humans , Kinetics , Models, Molecular , Nucleoside-Phosphate Kinase/genetics , Nucleotides/metabolism , Phosphorylation , Protein Binding , Protein Conformation , Recombinant Fusion Proteins/chemistry , Recombinant Fusion Proteins/metabolism
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