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1.
Mol Ecol ; 26(24): 6921-6937, 2017 12.
Article in English | MEDLINE | ID: mdl-29134724

ABSTRACT

Leafcutter ants propagate co-evolving fungi for food. The nearly 50 species of leafcutter ants (Atta, Acromyrmex) range from Argentina to the United States, with the greatest species diversity in southern South America. We elucidate the biogeography of fungi cultivated by leafcutter ants using DNA sequence and microsatellite-marker analyses of 474 cultivars collected across the leafcutter range. Fungal cultivars belong to two clades (Clade-A and Clade-B). The dominant and widespread Clade-A cultivars form three genotype clusters, with their relative prevalence corresponding to southern South America, northern South America, Central and North America. Admixture between Clade-A populations supports genetic exchange within a single species, Leucocoprinus gongylophorus. Some leafcutter species that cut grass as fungicultural substrate are specialized to cultivate Clade-B fungi, whereas leafcutters preferring dicot plants appear specialized on Clade-A fungi. Cultivar sharing between sympatric leafcutter species occurs frequently such that cultivars of Atta are not distinct from those of Acromyrmex. Leafcutters specialized on Clade-B fungi occur only in South America. Diversity of Clade-A fungi is greatest in South America, but minimal in Central and North America. Maximum cultivar diversity in South America is predicted by the Kusnezov-Fowler hypothesis that leafcutter ants originated in subtropical South America and only dicot-specialized leafcutter ants migrated out of South America, but the cultivar diversity becomes also compatible with a recently proposed hypothesis of a Central American origin by postulating that leafcutter ants acquired novel cultivars many times from other nonleafcutter fungus-growing ants during their migrations from Central America across South America. We evaluate these biogeographic hypotheses in the light of estimated dates for the origins of leafcutter ants and their cultivars.


Subject(s)
Agaricales/genetics , Ants/microbiology , Biological Coevolution , Animals , Ants/classification , Central America , Genetic Markers , Genetics, Population , Genotype , Microsatellite Repeats , North America , Phylogeny , Phylogeography , South America , Symbiosis
2.
Int J Syst Evol Microbiol ; 67(4): 1028-1032, 2017 Apr.
Article in English | MEDLINE | ID: mdl-27974089

ABSTRACT

A novel basidiomycetous yeast was isolated from the waste deposit of the attine ant Acromyrmex lundii (Hymenoptera: Formicidae). The field colony was located in Santurce town, Santa Fe province, Argentina. The description of the novel species was based on strain LLU043T. Analysis of the D1/D2 domains of the LSU rRNA gene sequences in GenBank demonstrated that strain LLU043T, belongs to the Rhodosporidiobolus clade and is closely related to Rhodosporidiobolus lusitaniae and Rhodosporidioboluscolostri with 97 % similarity to the two species. The novel species differs from R. lusitaniae and R. colostri in some physiological characteristics such as the lack of assimilation of cellobiose, salicin, succinate, citrate and ethylamine. The name Rhodosporidiobolus geoffroeae sp. nov. is proposed, with LLU043T (=CBS 12828T=CBMAI 1618T) as the type strain.


Subject(s)
Ants/microbiology , Basidiomycota/classification , Phylogeny , Animals , Argentina , Basidiomycota/genetics , Basidiomycota/isolation & purification , DNA, Fungal/genetics , Genes, rRNA , Mycological Typing Techniques , Sequence Analysis, DNA
3.
Indian J Microbiol ; 56(2): 172-81, 2016 Jun.
Article in English | MEDLINE | ID: mdl-27570309

ABSTRACT

Many toxic compounds are produced and released in the hemicellulosic hydrolyzates during the acid pretreatment step, which are required for the disruption of the lignocelluloses matrix and sugars release. The conventional methods of detoxification i.e. overliming, activated charcoal, ion exchange or even membrane-based separations have the limitations in removal of these toxic inhibitors in fermentation process. Hence, it is imperative to explore biological methods to overcome the inhibitors by minimizing the filtration steps, sugar loss and chemical additions. In the present study we screened sixty-four strains of yeasts to select potential strains for detoxification of furfural, acetic acid, ferulic acid, 5-hydroxymethyl furfural (5-HMF) as carbon and energy source. Among these strains Pichia occidentalis M1, Y1'a, Y1'b and Y3' showed a significant decrease in the toxic compounds but we selected two best yeast strains i.e. P. occidentalis Y1'a and P. occidentalis M1 for the further experiments with an aim to remove the fermentation inhibitors. The yeasts P. occidentalis Y1'a and P. occidentalis M1 were grown aerobically in sugarcane bagasse hemicellulose hydrolysate under submerged cultivation. For each yeast, a 2(2) full factorial design was performed considering the variables-pH (4.0 or 5.0) and agitation rate (100 or 300 rpm), and the percentage removal of HMF, furfural, acetic acid and phenols from hemicellulosic hydrolysates were responsive variables. After 96 h of biological treatment, P. occidentalis M1 and P. occidentalis Y1'a showed 42.89 and 46.04 % cumulative removal of inhibitors, respectively.

4.
Int J Syst Evol Microbiol ; 66(6): 2141-2145, 2016 Jun.
Article in English | MEDLINE | ID: mdl-26944514

ABSTRACT

A novel ascomycetous yeast species in the genus Wickerhamomyces was isolated from the fungus garden of an attine ant nest, Acromyrmex lundii (Hymenoptera: Formicidae), from Santa Fe province, Argentina. Pairwise sequence alignment of D1/D2 sequences in the GenBank (http://www.ncbi.nlm.nih.gov) database revealed that the novel species is related most closely to Wickerhamomyces subpelliculosus, Wickerhamomyces linferdii, Wickerhamomyces anomalus, Wickerhamomyces siamensis and Wickerhamomycesciferrii with 96% similarity to the first four. The species name Wickerhamomyces spegazzinii sp. nov. is proposed to accommodate this novel strain, which differs from the above species in melibiose, 5-keto-D-gluconate, succinate, and DL-lactate assimilation among others. The type strain is JLU025T (=CBS 12756T=CBMAI 1619T).


Subject(s)
Ants/microbiology , Phylogeny , Saccharomycetales/classification , Animals , Argentina , Candida , DNA, Fungal/genetics , DNA, Ribosomal Spacer/genetics , Mycological Typing Techniques , Saccharomycetales/genetics , Saccharomycetales/isolation & purification , Sequence Analysis, DNA
5.
Int J Syst Evol Microbiol ; 65(12): 4469-4473, 2015 Dec.
Article in English | MEDLINE | ID: mdl-26364292

ABSTRACT

Nine strains of a novel yeast species were isolated from rotting wood, tree bark, ant nests or living as endophytes in leaves of Vellozia gigantea. Analysis of the sequences of the internal transcribed spacer (ITS) region and the D1/D2 domains of the large subunit rRNA gene showed that this species was related to Candida insectorum in the Yamadazyma clade. The novel species differed from closely related species by 10 and 11 substitutions in the ITS region and the D1/D2 domains of the large subunit of the rRNA gene, respectively. The species is heterothallic and forms asci with one to two hat-shaped ascospores. The name Yamadazyma riverae sp. nov. is proposed for the novel species. The type strain is UFMG-CM-Y444T ( = CBS 14121T) and the allotype strain is TT12 ( = CBS 14098 = UFMG-CM-Y577). The Mycobank number is MB 813221.


Subject(s)
Magnoliopsida/microbiology , Phylogeny , Plant Leaves/microbiology , Saccharomycetales/classification , Brazil , DNA, Fungal/genetics , DNA, Ribosomal Spacer/genetics , Endophytes/classification , Endophytes/genetics , Endophytes/isolation & purification , Molecular Sequence Data , Mycological Typing Techniques , Saccharomycetales/genetics , Saccharomycetales/isolation & purification , Sequence Analysis, DNA , Wood/microbiology
6.
Antonie Van Leeuwenhoek ; 107(3): 731-40, 2015 Mar.
Article in English | MEDLINE | ID: mdl-25576160

ABSTRACT

Currently, five species are formally described in Escovopsis, a specialized mycoparasitic genus of fungus gardens of attine ants (Hymenoptera: Formicidae: tribe Attini). Four species were isolated from leaf-cutting ants in Brazil, including Escovopsis moelleri and Escovopsis microspora from nests of Acromyrmex subterraneus molestans, Escovopsis weberi from a nest of Atta sp. and Escovopsis lentecrescens from a nest of Acromyrmex subterraneus subterraneus. The fifth species, Escovopsis aspergilloides was isolated from a nest of the higher attine ant Trachymyrmex ruthae from Trinidad. Here, we describe a new species, Escovopsis trichodermoides isolated from a fungus garden of the lower attine ant Mycocepurus goeldii, which differs from the five other species by highly branched, trichoderma-like conidiophores lacking swollen vesicles, with reduced conidiogenous cells and distinctive conidia morphology. Phylogenetic analyses based on partial tef1 gene sequences support the distinctiveness of this species. A portion of the internal transcribed spacers of the nuclear rDNA was sequenced to serve as a DNA barcode. Future molecular and morphological studies in this group of fungi will certainly unravel the taxonomic diversity of Escovopsis associated with fungus-growing ants.


Subject(s)
Environmental Microbiology , Hypocreales/classification , Hypocreales/isolation & purification , Animals , Ants , Brazil , Cluster Analysis , DNA, Fungal/chemistry , DNA, Fungal/genetics , DNA, Helminth/chemistry , DNA, Helminth/genetics , DNA, Ribosomal Spacer/chemistry , DNA, Ribosomal Spacer/genetics , Hypocreales/cytology , Hypocreales/genetics , Microbiological Techniques , Microscopy , Molecular Sequence Data , Peptide Elongation Factor 1/genetics , Phylogeny , Sequence Analysis, DNA , Spores, Fungal/cytology
7.
PLoS One ; 9(8): e103800, 2014.
Article in English | MEDLINE | ID: mdl-25101899

ABSTRACT

Attine ants cultivate fungi as their most important food source and in turn the fungus is nourished, protected against harmful microorganisms, and dispersed by the ants. This symbiosis evolved approximately 50-60 million years ago in the late Paleocene or early Eocene, and since its origin attine ants have acquired a variety of fungal mutualists in the Leucocoprineae and the distantly related Pterulaceae. The most specialized symbiotic interaction is referred to as "higher agriculture" and includes leafcutter ant agriculture in which the ants cultivate the single species Leucoagaricus gongylophorus. Higher agriculture fungal cultivars are characterized by specialized hyphal tip swellings, so-called gongylidia, which are considered a unique, derived morphological adaptation of higher attine fungi thought to be absent in lower attine fungi. Rare reports of gongylidia-like structures in fungus gardens of lower attines exist, but it was never tested whether these represent rare switches of lower attines to L. gonglyphorus cultivars or whether lower attine cultivars occasionally produce gongylidia. Here we describe the occurrence of gongylidia-like structures in fungus gardens of the asexual lower attine ant Mycocepurus smithii. To test whether M. smithii cultivates leafcutter ant fungi or whether lower attine cultivars produce gongylidia, we identified the M. smithii fungus utilizing molecular and morphological methods. Results shows that the gongylidia-like structures of M. smithii gardens are morphologically similar to gongylidia of higher attine fungus gardens and can only be distinguished by their slightly smaller size. A molecular phylogenetic analysis of the fungal ITS sequence indicates that the gongylidia-bearing M. smithii cultivar belongs to the so-called "Clade 1"of lower Attini cultivars. Given that M. smithii is capable of cultivating a morphologically and genetically diverse array of fungal symbionts, we discuss whether asexuality of the ant host maybe correlated with low partner fidelity and active symbiont choice between fungus and ant mutualists.


Subject(s)
Agaricales/growth & development , Ants/physiology , Behavior, Animal , Agaricales/cytology , Agaricales/genetics , Animals , Bayes Theorem , Likelihood Functions , Phylogeny , Reproduction, Asexual , Symbiosis
8.
Environ Microbiol Rep ; 6(4): 339-45, 2014 Aug.
Article in English | MEDLINE | ID: mdl-24992532

ABSTRACT

Attine ants maintain an association with antibiotic-producing Actinobacteria found on their integuments. Evidence supports these bacteria as auxiliary symbionts that help ants to defend the fungus gardens against pathogens. Using Pseudonocardia strains isolated from Trachymyrmex ants, we tested whether the inhibitory capabilities of such strains are restricted to Escovopsis parasites that infect gardens of this ant genus. Twelve Pseudonocardia strains were tested in in vitro bioassays against Escovopsis strains derived from fungus gardens of Trachymyrmex (n = 1) and leaf-cutting ants (n = 3). Overall, significant differences were observed in the mycelial growth among each Escovopsis strain in the presence of Pseudonocardia. Particularly, Escovopsis from Acromyrmex and Trachymyrmex were the most inhibited strains in comparison to Escovopsis isolated from Atta. This result suggests that Pseudonocardia isolated from Trachymyrmex possibly secrete antimicrobial compounds effective against diverse Escovopsis strains. The fact that Trachymyrmex ants harbour Pseudonocardia strains with broad spectrum of activity and its defensive role on attine gardens are discussed.


Subject(s)
Actinomycetales/isolation & purification , Actinomycetales/physiology , Antibiosis , Ants/microbiology , Hypocreales/growth & development , Symbiosis , Animals , Biological Assay , Mycelium/growth & development
9.
Appl Biochem Biotechnol ; 173(3): 694-704, 2014 Jun.
Article in English | MEDLINE | ID: mdl-24699813

ABSTRACT

In this work, the xylanolytic profile of Leucoagaricus gongylophorus was studied, and two extracellular enzymes with xylanolytic activity (XyLg1 and XyLg2) were isolated, purified, and characterized. XyLg1 has a molecular mass of about 38 kDa and pI greater than 4.8. For beechwood xylan substrate, XyLg1 showed an optimum temperature of 40 °C, optimum pH between 8.5 and 10.5, and Km = 14.7 ± 7.6 mg mL(-1). Kinetic studies of the XyLg1 using polygalacturonic acid as substrate were developed, and the enzyme showed optimum pH 5.5, optimum temperature between 50 and 60 °C, and Km = 2.2 ± 0.5 mg mL(-1). XyLg2 has molecular weight of about 24 kDa and pI less than 4.8, and thus is an acid protein. Parameters such as optimum temperature (70 °C) and pH (4.0), as well as the kinetic parameters (Km = 7.4 ± 2.0 mg mL(-1)) using beechwood xylan as substrate, were determined for XyLg2. This enzyme has no activity for polygalacturonic acid as substrate. XyLg1 and XyLg2 are the first native xylanases isolated and characterized from L. gongylophorus fungi and, due to their biochemistry and kinetic features, they have potential to be used in biotechnological processes.


Subject(s)
Agaricales/enzymology , Endo-1,4-beta Xylanases/chemistry , Fungal Proteins/chemistry , Pectins/chemistry , Hot Temperature , Hydrogen-Ion Concentration , Kinetics
10.
Biotechnol Biofuels ; 7: 63, 2014.
Article in English | MEDLINE | ID: mdl-24739736

ABSTRACT

BACKGROUND: Heavy usage of gasoline, burgeoning fuel prices, and environmental issues have paved the way for the exploration of cellulosic ethanol. Cellulosic ethanol production technologies are emerging and require continued technological advancements. One of the most challenging issues is the pretreatment of lignocellulosic biomass for the desired sugars yields after enzymatic hydrolysis. We hypothesized that consecutive dilute sulfuric acid-dilute sodium hydroxide pretreatment would overcome the native recalcitrance of sugarcane bagasse (SB) by enhancing cellulase accessibility of the embedded cellulosic microfibrils. RESULTS: SB hemicellulosic hydrolysate after concentration by vacuum evaporation and detoxification showed 30.89 g/l xylose along with other products (0.32 g/l glucose, 2.31 g/l arabinose, and 1.26 g/l acetic acid). The recovered cellulignin was subsequently delignified by sodium hydroxide mediated pretreatment. The acid-base pretreated material released 48.50 g/l total reducing sugars (0.91 g sugars/g cellulose amount in SB) after enzymatic hydrolysis. Ultra-structural mapping of acid-base pretreated and enzyme hydrolyzed SB by microscopic analysis (scanning electron microcopy (SEM), transmitted light microscopy (TLM), and spectroscopic analysis (X-ray diffraction (XRD), Fourier transform infrared (FTIR) spectroscopy, Fourier transform near-infrared (FT-NIR) spectroscopy, and nuclear magnetic resonance (NMR) spectroscopy) elucidated the molecular changes in hemicellulose, cellulose, and lignin components of bagasse. The detoxified hemicellulosic hydrolysate was fermented by Scheffersomyces shehatae (syn. Candida shehatae UFMG HM 52.2) and resulted in 9.11 g/l ethanol production (yield 0.38 g/g) after 48 hours of fermentation. Enzymatic hydrolysate when fermented by Saccharomyces cerevisiae 174 revealed 8.13 g/l ethanol (yield 0.22 g/g) after 72 hours of fermentation. CONCLUSIONS: Multi-scale structural studies of SB after sequential acid-base pretreatment and enzymatic hydrolysis showed marked changes in hemicellulose and lignin removal at molecular level. The cellulosic material showed high saccharification efficiency after enzymatic hydrolysis. Hemicellulosic and cellulosic hydrolysates revealed moderate ethanol production by S. shehatae and S. cerevisiae under batch fermentation conditions.

11.
Int J Syst Evol Microbiol ; 64(Pt 7): 2364-2369, 2014 Jul.
Article in English | MEDLINE | ID: mdl-24763602

ABSTRACT

Seven apiculate yeast strains that were isolated from the flowers of Syphocampylus corymbiferus Pohl in Brazil are genetically, morphologically and phenotypically distinct from recognized species of the genera Hanseniaspora and Kloeckera. Genetic discontinuities between the novel strains and their closest relatives were found using a networking approach based on the concatenated sequences of the rRNA gene (internal transcribed spacer and D1/D2 of the LSU), and the protein-coding genes for actin and translation elongation factor-1α. Phylogenetic analysis based on the rRNA and the actin gene placed the novel species represented by the strains in close relationship to Hanseniaspora meyeri and Hanseniaspora clermontiae. PCR fingerprinting with microsatellite primers confirmed the genetic heterogeneity of the novel species. The name Hanseniaspora nectarophila sp. nov. is proposed, with UFMG POG a.1(T) ( = ZIM 2311(T)  = CBS 13383(T)) as the type strain; MycoBank no. MB807210. As the current description of the genus does not allow the presence of multilateral budding, an emended diagnosis of the genus Hanseniaspora Zikes is proposed.


Subject(s)
Campanulaceae/microbiology , Flowers/microbiology , Hanseniaspora/classification , Phylogeny , Actins/genetics , Brazil , DNA, Fungal/genetics , DNA, Ribosomal Spacer/genetics , Genes, Fungal , Hanseniaspora/genetics , Hanseniaspora/isolation & purification , Molecular Sequence Data , Mycological Typing Techniques , Peptide Elongation Factor 1/genetics , Sequence Analysis, DNA
12.
Int J Syst Evol Microbiol ; 64(Pt 4): 1428-1433, 2014 Apr.
Article in English | MEDLINE | ID: mdl-24566828

ABSTRACT

A novel yeast species was recovered from the fungus garden of the leaf-cutting ant Acromyrmex balzani (Hymenoptera: Formicidae). The growth of the novel yeast species is limited by its ability to metabolize only a few carbon and nitrogenous compounds. A remarkable characteristic of this strain is the vigorous growth in 1 % acetic acid. Sequence analysis of the D1/D2 domains of the LSU rRNA gene showed that the novel species belongs to the Starmerella clade and is phenotypically and genetically divergent from currently recognized species in this clade. Described here as Starmerella aceti f.a., sp. nov., it differs by 37 nucleotide substitutions in the D1/D2 region from Starmerella jinningensis CBS 11864(T), the most closely related species. The type strain of Starmerella aceti sp. nov. is TO 125(T) ( = CBMAI 1594(T) = CBS 13086(T)).


Subject(s)
Ants , Ascomycota/classification , Phylogeny , Acetic Acid/metabolism , Animals , Ascomycota/genetics , Ascomycota/isolation & purification , Brazil , DNA, Fungal/genetics , Genes, rRNA , Molecular Sequence Data , Mycological Typing Techniques , Plant Leaves/microbiology , Sequence Analysis, DNA
13.
J Basic Microbiol ; 54(11): 1186-96, 2014 Nov.
Article in English | MEDLINE | ID: mdl-23681670

ABSTRACT

Leaf-cutting ants modify the properties of the soil adjacent to their nests. Here, we examined whether such an ant-altered environment impacts the belowground fungal communities. Fungal diversity and community structure of soil from the fungus garden chambers of Atta sexdens rubropilosa and Atta bisphaerica, two widespread leaf-cutting ants in Brazil, were determined and compared with non-nest soils. Culture-dependent methods revealed similar species richness but different community compositions between both types of soils. Penicillium janthinellum and Trichoderma spirale were the prevalent isolates in fungus chamber soils and non-nest soils, respectively. In contrast to cultivation methods, analyses of clone libraries based on the internal transcribed spacer (ITS) region indicated that richness of operational taxonomic units significantly differed between soils of the fungus chamber and non-nest soils. FastUnifrac analyses based on ITS sequences further revealed a clear distinction in the community structure between both types of soils. Plectania milleri and an uncultured Clavariaceae fungus were prevalent in fungus chamber soils and non-nest soils, respectively. FastUnifrac analyses also revealed that fungal community structures of soil from the garden chambers markedly differed among ant species. Our findings suggest that leaf-cutting ants affect fungal communities in the soil from the fungus chamber in comparison to non-nest soils.


Subject(s)
Biodiversity , Fungi/classification , Fungi/isolation & purification , Hymenoptera/growth & development , Soil Microbiology , Agaricales , Animals , Ascomycota , Brazil , DNA, Fungal/chemistry , DNA, Fungal/genetics , DNA, Ribosomal Spacer/chemistry , DNA, Ribosomal Spacer/genetics , Fungi/genetics , Molecular Sequence Data , Penicillium , Sequence Analysis, DNA , Trichoderma
14.
Springerplus ; 2(1): 254, 2013 Dec.
Article in English | MEDLINE | ID: mdl-23772357

ABSTRACT

BACKGROUND: It is generally accepted that material collected by leaf-cutting ants of the genus Acromyrmex consists solely of plant matter, which is used in the nest as substrate for a symbiotic fungus providing nutrition to the ants. There is only one previous report of any leaf-cutting ant foraging directly on fungal basidiocarps. FINDINGS: Basidiocarps of Psilocybe coprophila growing on cow dung were actively collected by workers of Acromyrmex lobicornis in Santa Fé province, Argentina. During this behaviour the ants displayed typical signals of recognition and continuously recruited other foragers to the task. Basidiocarps of different stages of maturity were being transported into the nest by particular groups of workers, while other workers collected plant material. CONCLUSIONS: The collection of mature basidiocarps with viable spores by leaf-cutting ants in nature adds substance to theories relating to the origin of fungiculture in these highly specialized social insects.

15.
N Biotechnol ; 30(6): 839-50, 2013 Sep 25.
Article in English | MEDLINE | ID: mdl-23563183

ABSTRACT

The marine environment offers both economic and scientific potential which are relatively untapped from a biotechnological point of view. These environments whilst harsh are ironically fragile and dependent on a harmonious life form balance. Exploitation of natural resources by exhaustive wild harvesting has obvious negative environmental consequences. From a European industry perspective marine organisms are a largely underutilised resource. This is not due to lack of interest but due to a lack of choice the industry faces for cost competitive, sustainable and environmentally conscientious product alternatives. Knowledge of the biotechnological potential of marine organisms together with the development of sustainable systems for their cultivation, processing and utilisation are essential. In 2010, the European Commission recognised this need and funded a collaborative RTD/SME project under the Framework 7-Knowledge Based Bio-Economy (KBBE) Theme 2 Programme 'Sustainable culture of marine microorganisms, algae and/or invertebrates for high value added products'. The scope of that project entitled 'Sustainable Production of Biologically Active Molecules of Marine Based Origin' (BAMMBO) is outlined. Although the Union is a global leader in many technologies, it faces increasing competition from traditional rivals and emerging economies alike and must therefore improve its innovation performance. For this reason innovation is placed at the heart of a European Horizon 2020 Strategy wherein the challenge is to connect economic performance to eco performance. This article provides a synopsis of the research activities of the BAMMBO project as they fit within the wider scope of sustainable environmentally conscientious marine resource exploitation for high-value biomolecules.


Subject(s)
Aquatic Organisms , Biotechnology , Biotechnology/economics , Biotechnology/methods , Biotechnology/organization & administration , Biotechnology/trends , Europe
16.
Biomed Res Int ; 2013: 835081, 2013.
Article in English | MEDLINE | ID: mdl-23586060

ABSTRACT

After decades of intensive searching for antimicrobial compounds derived from actinobacteria, the frequency of isolation of new molecules has decreased. To cope with this concern, studies have focused on the exploitation of actinobacteria from unexplored environments and actinobacteria symbionts of plants and animals. In this study, twenty-four actinobacteria strains isolated from workers of Trachymyrmex ants were evaluated for antifungal activity towards a variety of Candida species. Results revealed that seven strains inhibited the tested Candida species. Streptomyces sp. TD025 presented potent and broad spectrum of inhibition of Candida and was selected for the isolation of bioactive molecules. From liquid shake culture of this bacterium, we isolated the rare antimycin urauchimycins A and B. For the first time, these molecules were evaluated for antifungal activity against medically important Candida species. Both antimycins showed antifungal activity, especially urauchimycin B. This compound inhibited the growth of all Candida species tested, with minimum inhibitory concentration values equivalent to the antifungal nystatin. Our results concur with the predictions that the attine ant-microbe symbiosis may be a source of bioactive metabolites for biotechnology and medical applications.


Subject(s)
Anti-Infective Agents/pharmacology , Ants/microbiology , Candida/drug effects , Actinobacteria/chemistry , Actinobacteria/isolation & purification , Animals , Anti-Infective Agents/isolation & purification , Antimycin A/analogs & derivatives , Antimycin A/isolation & purification , Antimycin A/pharmacology , Ants/chemistry , Candida/pathogenicity , Symbiosis
17.
Biotechnol Biofuels ; 6(1): 4, 2013 Jan 16.
Article in English | MEDLINE | ID: mdl-23324164

ABSTRACT

BACKGROUND: Diminishing supplies of fossil fuels and oil spills are rousing to explore the alternative sources of energy that can be produced from non-food/feed-based substrates. Due to its abundance, sugarcane bagasse (SB) could be a model substrate for the second-generation biofuel cellulosic ethanol. However, the efficient bioconversion of SB remains a challenge for the commercial production of cellulosic ethanol. We hypothesized that oxalic-acid-mediated thermochemical pretreatment (OAFEX) would overcome the native recalcitrance of SB by enhancing the cellulase amenability toward the embedded cellulosic microfibrils. RESULTS: OAFEX treatment revealed the solubilization of hemicellulose releasing sugars (12.56 g/l xylose and 1.85 g/l glucose), leaving cellulignin in an accessible form for enzymatic hydrolysis. The highest hydrolytic efficiency (66.51%) of cellulignin was achieved by enzymatic hydrolysis (Celluclast 1.5 L and Novozym 188). The ultrastructure characterization of SB using scanning electron microscopy (SEM), atomic force microscopy (AFM), Raman spectroscopy, Fourier transform-near infrared spectroscopy (FT-NIR), Fourier transform infrared spectroscopy (FTIR), and X-ray diffraction (XRD) revealed structural differences before and after OAFEX treatment with enzymatic hydrolysis. Furthermore, fermentation mediated by C. shehatae UFMG HM52.2 and S. cerevisiae 174 showed fuel ethanol production from detoxified acid (3.2 g/l, yield 0.353 g/g; 0.52 g/l, yield, 0.246 g/g) and enzymatic hydrolysates (4.83 g/l, yield, 0.28 g/g; 6.6 g/l, yield 0.46 g/g). CONCLUSIONS: OAFEX treatment revealed marked hemicellulose degradation, improving the cellulases' ability to access the cellulignin and release fermentable sugars from the pretreated substrate. The ultrastructure of SB after OAFEX and enzymatic hydrolysis of cellulignin established thorough insights at the molecular level.

18.
3 Biotech ; 3(5): 345-352, 2013 Oct.
Article in English | MEDLINE | ID: mdl-28324336

ABSTRACT

Bioconversion of hemicellulosic hydrolysates into ethanol with the desired yields plays a pivotal role for the overall success of biorefineries. This paper aims to evaluate the ethanol production potential of four native strains of Scheffersomyces shehatae (syn. Candida shehatae) viz. S. shehatae BR6-2AI, CG8-8BY, PT1-1BASP and BR6-2AY, isolated from Brazilian forests. These strains were grown in commercial D-xylose-supplemented synthetic medium and sugarcane bagasse hemicellulose hydrolysate. S. shehatae BR6-2AY showed maximum ethanol production [0.48 ± 0.019 g g-1, 95 ± 3.78 % fermentation efficiency (FE)] followed by S. shehatae CG8-8BY (0.47 ± 0.016 g g-1, 93 ± 3.12 % FE), S. shehatae BR6-2AI (0.45 ± 0.01 g g-1, 89 ± 1.71 % FE) and S. shehatae PT1-1BASP (0.44 ± 0.02 g g-1, 86 ± 3.37 % FE) when grown in synthetic medium. During the fermentation of hemicellulose hydrolysates, S. shehatae CG8-8BY and S. shehatae BR6-2AY showed ethanol production (0.30 ± 0.05 g g-1, 58 ± 0.02 % FE) and (0.21 ± 0.01 g g-1, 40 ± 1.93 % FE), respectively.

19.
Insects ; 3(1): 228-45, 2012 Feb 17.
Article in English | MEDLINE | ID: mdl-26467957

ABSTRACT

The possible roles played by yeasts in attine ant nests are mostly unknown. Here we present our investigations on the plant polysaccharide degradation profile of 82 yeasts isolated from fungus gardens of Atta and Acromyrmex species to demonstrate that yeasts found in ant nests may play the role of making nutrients readily available throughout the garden and detoxification of compounds that may be deleterious to the ants and their fungal cultivar. Among the yeasts screened, 65% exhibited cellulolytic enzymes, 44% exhibited pectinolytic activity while 27% and 17% possess enzyme systems for the degradation of protease and amylase, respectively. Galacturonic acid, which had been reported in previous work to be poorly assimilated by the ant fungus and also to have a negative effect on ants' survival, was assimilated by 64% and 79% of yeasts isolated from nests of A. texana and Acromyrmex respectively. Our results suggest that yeasts found in ant nests may participate in generation of nutrients and removal of potentially toxic compounds, thereby contributing to the stability of the complex microbiota found in the leaf-cutting ant nests.

20.
FEMS Microbiol Ecol ; 78(2): 244-55, 2011 Nov.
Article in English | MEDLINE | ID: mdl-21671963

ABSTRACT

We profiled the microfungal communities in gardens of fungus-growing ants to evaluate possible species-specific ant-microfungal associations and to assess the potential dependencies of microfungal diversity on ant foraging behavior. In a 1-year survey, we isolated microfungi from nests of Cyphomyrmex wheeleri, Trachymyrmex septentrionalis and Atta texana in Central Texas. Microfungal prevalence was higher in gardens of C. wheeleri (57%) than in the gardens of T. septentrionalis (46%) and A. texana (35%). Culture-dependent methods coupled with a polyphasic approach of species identification revealed diverse and changing microfungal communities in all the sampling periods. Diversity analyses showed no obvious correlations between the number of observed microfungal species, ant species, or the ants' changing foraging behavior across the seasons. However, both correspondence analysis and 5.8S-rRNA gene unifrac analyses suggested structuring of microfungal communities by ant host. These host-specific differences may reflect in part the three different environments where ants were collected. Most interestingly, the specialized fungal parasite Escovopsis was not isolated from any attine garden in this study near the northernmost limit of the range of attine ants, contrasting with previous studies that indicated a significant incidence of this parasite in ant gardens from Central and South America. The observed differences of microfungal communities in attine gardens suggest that the ants are continuously in contact with a diverse microfungal species assemblage.


Subject(s)
Ants/physiology , Fungi/growth & development , Symbiosis , Animals , Base Sequence , Ecology , Ecosystem , Fungi/classification , Fungi/genetics , Gardening , Molecular Sequence Data , Soil Microbiology , South America , Texas
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